RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
USP11-207ENST00000478596 NUDT16Q96DE0 195 aaKnown RBP21.17■□□□□ 0.98
USP11-207ENST00000478596 POLR3AO14802 1390 aaPredicted RBP21.17■□□□□ 0.98
USP11-207ENST00000478596 MARCH10Q8NA82 808 aaPredicted RBP21.16■□□□□ 0.98
USP11-207ENST00000478596 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
USP11-207ENST00000478596 GCP02774 474 aa21.14■□□□□ 0.97
USP11-207ENST00000478596 ABTB2Q8N961 1025 aa21.14■□□□□ 0.97
USP11-207ENST00000478596 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
USP11-207ENST00000478596 ACEP12821 1306 aa21.11■□□□□ 0.97
USP11-207ENST00000478596 HSPA6P17066 643 aa21.11■□□□□ 0.97
USP11-207ENST00000478596 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
USP11-207ENST00000478596 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
USP11-207ENST00000478596 PLEKHG3A1L390 1219 aa21.08■□□□□ 0.97
USP11-207ENST00000478596 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.97
USP11-207ENST00000478596 CCDC61Q9Y6R9 512 aa21.07■□□□□ 0.96
USP11-207ENST00000478596 PAPPAQ13219 1627 aa21.07■□□□□ 0.96
USP11-207ENST00000478596 GRIN3BO60391 1043 aa21.06■□□□□ 0.96
USP11-207ENST00000478596 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
USP11-207ENST00000478596 SLC16A10Q8TF71 515 aa21.05■□□□□ 0.96
USP11-207ENST00000478596 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
USP11-207ENST00000478596 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
USP11-207ENST00000478596 TOPAZ1Q8N9V7 1692 aa21.03■□□□□ 0.96
USP11-207ENST00000478596 POLD1P28340 1107 aa21.03■□□□□ 0.96
USP11-207ENST00000478596 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
USP11-207ENST00000478596 AKAP12Q02952 1782 aa21.02■□□□□ 0.96
USP11-207ENST00000478596 ZNF827Q17R98 1081 aa21.02■□□□□ 0.96
USP11-207ENST00000478596 KLHL34Q8N239 644 aa21.02■□□□□ 0.96
USP11-207ENST00000478596 NLGN2Q8NFZ4 835 aa21.01■□□□□ 0.95
USP11-207ENST00000478596 GPBP1L1Q9HC44 474 aaPredicted RBP21.01■□□□□ 0.95
USP11-207ENST00000478596 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
USP11-207ENST00000478596 EXOC5O00471 708 aa21■□□□□ 0.95
USP11-207ENST00000478596 YBX3P16989 372 aaKnown RBP eCLIP21■□□□□ 0.95
USP11-207ENST00000478596 BRD4O60885 1362 aaPredicted RBP20.99■□□□□ 0.95
USP11-207ENST00000478596 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
USP11-207ENST00000478596 CARD10Q9BWT7 1032 aa20.98■□□□□ 0.95
USP11-207ENST00000478596 AXIN2Q9Y2T1 843 aa20.98■□□□□ 0.95
USP11-207ENST00000478596 SLIT3O75094 1523 aa20.98■□□□□ 0.95
USP11-207ENST00000478596 COL24A1Q17RW2 1714 aa20.98■□□□□ 0.95
USP11-207ENST00000478596 NHSQ6T4R5 1651 aa20.97■□□□□ 0.95
USP11-207ENST00000478596 AKT1S1Q96B36 256 aa20.96■□□□□ 0.95
USP11-207ENST00000478596 TNS2Q63HR2 1409 aa20.95■□□□□ 0.95
USP11-207ENST00000478596 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
USP11-207ENST00000478596 COL18A1P39060 1754 aa20.95■□□□□ 0.94
USP11-207ENST00000478596 LRRC4BQ9NT99 713 aa20.95■□□□□ 0.94
USP11-207ENST00000478596 ADCY9O60503 1353 aa20.95■□□□□ 0.94
USP11-207ENST00000478596 NLRP6P59044 892 aa20.93■□□□□ 0.94
USP11-207ENST00000478596 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
USP11-207ENST00000478596 USP6P35125 1406 aa20.92■□□□□ 0.94
USP11-207ENST00000478596 CPSF1Q10570 1443 aaKnown RBP20.91■□□□□ 0.94
USP11-207ENST00000478596 ACSBG1Q96GR2 724 aa20.91■□□□□ 0.94
USP11-207ENST00000478596 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
USP11-207ENST00000478596 STAC3Q96MF2 364 aa20.91■□□□□ 0.94
USP11-207ENST00000478596 QSER1Q2KHR3 1735 aa20.9■□□□□ 0.94
USP11-207ENST00000478596 ABCC6O95255 1503 aa20.89■□□□□ 0.94
USP11-207ENST00000478596 PPIP5K1Q6PFW1 1433 aa20.89■□□□□ 0.94
USP11-207ENST00000478596 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.93
USP11-207ENST00000478596 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.93
USP11-207ENST00000478596 ARHGEF25Q86VW2 580 aa20.89■□□□□ 0.93
USP11-207ENST00000478596 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
USP11-207ENST00000478596 APLP1P51693 650 aa20.88■□□□□ 0.93
USP11-207ENST00000478596 DNAJC5GQ8N7S2 189 aa20.87■□□□□ 0.93
USP11-207ENST00000478596 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
USP11-207ENST00000478596 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
USP11-207ENST00000478596 ZNF526Q8TF50 670 aaPredicted RBP20.86■□□□□ 0.93
USP11-207ENST00000478596 TFCP2L1Q9NZI6 479 aa20.85■□□□□ 0.93
USP11-207ENST00000478596 BTAF1O14981 1849 aa20.85■□□□□ 0.93
USP11-207ENST00000478596 KIF3CO14782 793 aa20.83■□□□□ 0.93
USP11-207ENST00000478596 KCNH5Q8NCM2 988 aa20.83■□□□□ 0.93
USP11-207ENST00000478596 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
USP11-207ENST00000478596 SRPK2P78362 688 aaKnown RBP20.81■□□□□ 0.92
USP11-207ENST00000478596 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
USP11-207ENST00000478596 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
USP11-207ENST00000478596 COL13A1Q5TAT6 717 aaPredicted RBP20.79■□□□□ 0.92
USP11-207ENST00000478596 IL2RBP14784 551 aa20.77■□□□□ 0.92
USP11-207ENST00000478596 PRELPP51888 382 aa20.77■□□□□ 0.92
USP11-207ENST00000478596 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
USP11-207ENST00000478596 CABP1Q9NZU7 370 aa20.77■□□□□ 0.92
USP11-207ENST00000478596 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
USP11-207ENST00000478596 CAPN15O75808 1086 aa20.75■□□□□ 0.91
USP11-207ENST00000478596 TUBGCP6Q96RT7 1819 aa20.75■□□□□ 0.91
USP11-207ENST00000478596 NFAT5O94916 1531 aa20.73■□□□□ 0.91
USP11-207ENST00000478596 TOMM70O94826 608 aa20.73■□□□□ 0.91
USP11-207ENST00000478596 KCNQ4P56696 695 aa20.73■□□□□ 0.91
USP11-207ENST00000478596 COL23A1Q86Y22 540 aaPredicted RBP20.73■□□□□ 0.91
USP11-207ENST00000478596 ERBB3P21860 1342 aa20.73■□□□□ 0.91
USP11-207ENST00000478596 JMYQ8N9B5 988 aa20.72■□□□□ 0.91
USP11-207ENST00000478596 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
USP11-207ENST00000478596 SOX12O15370 315 aa20.71■□□□□ 0.91
USP11-207ENST00000478596 TNS4Q8IZW8 715 aa20.71■□□□□ 0.91
USP11-207ENST00000478596 NLRP2Q9NX02 1062 aa20.71■□□□□ 0.91
USP11-207ENST00000478596 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
USP11-207ENST00000478596 MSH5O43196 834 aa20.69■□□□□ 0.9
USP11-207ENST00000478596 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
USP11-207ENST00000478596 KLRG1Q96E93 195 aa20.68■□□□□ 0.9
USP11-207ENST00000478596 TTC21AQ8NDW8 1320 aa20.68■□□□□ 0.9
USP11-207ENST00000478596 CENPJQ9HC77 1338 aaPredicted RBP20.68■□□□□ 0.9
USP11-207ENST00000478596 ZNF692Q9BU19 519 aaPredicted RBP20.67■□□□□ 0.9
USP11-207ENST00000478596 ANKRD36BQ8N2N9 1353 aa20.67■□□□□ 0.9
USP11-207ENST00000478596 CCNL1Q9UK58 526 aaPredicted RBP20.66■□□□□ 0.9
USP11-207ENST00000478596 LY75O60449 1722 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms