RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 KIAA0232Q92628 1395 aa16■□□□□ 0.15
PDCD11-204ENST00000478543 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
PDCD11-204ENST00000478543 CEP350Q5VT06 3117 aa15.99■□□□□ 0.15
PDCD11-204ENST00000478543 NRKQ7Z2Y5 1582 aa15.99■□□□□ 0.15
PDCD11-204ENST00000478543 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
PDCD11-204ENST00000478543 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
PDCD11-204ENST00000478543 KCNQ2O43526 872 aa15.98■□□□□ 0.15
PDCD11-204ENST00000478543 PDGFDQ9GZP0 370 aaPredicted RBP15.98■□□□□ 0.15
PDCD11-204ENST00000478543 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
PDCD11-204ENST00000478543 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
PDCD11-204ENST00000478543 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
PDCD11-204ENST00000478543 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
PDCD11-204ENST00000478543 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
PDCD11-204ENST00000478543 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
PDCD11-204ENST00000478543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDCD11-204ENST00000478543 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
PDCD11-204ENST00000478543 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
PDCD11-204ENST00000478543 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
PDCD11-204ENST00000478543 USP6P35125 1406 aa15.95■□□□□ 0.14
PDCD11-204ENST00000478543 EDC4Q6P2E9 1401 aaKnown RBP15.95■□□□□ 0.14
PDCD11-204ENST00000478543 PEAK1Q9H792 1746 aa15.95■□□□□ 0.14
PDCD11-204ENST00000478543 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
PDCD11-204ENST00000478543 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
PDCD11-204ENST00000478543 ANP32CO43423 234 aa15.94■□□□□ 0.14
PDCD11-204ENST00000478543 LMO7Q8WWI1 1683 aa15.94■□□□□ 0.14
PDCD11-204ENST00000478543 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
PDCD11-204ENST00000478543 ZC3H6P61129 1189 aaKnown RBP15.93■□□□□ 0.14
PDCD11-204ENST00000478543 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
PDCD11-204ENST00000478543 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
PDCD11-204ENST00000478543 TTC21BQ7Z4L5 1316 aa15.93■□□□□ 0.14
PDCD11-204ENST00000478543 PARP4Q9UKK3 1724 aaKnown RBP15.92■□□□□ 0.14
PDCD11-204ENST00000478543 NBPF14Q5TI25 921 aa15.92■□□□□ 0.14
PDCD11-204ENST00000478543 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
PDCD11-204ENST00000478543 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
PDCD11-204ENST00000478543 PTF1AQ7RTS3 328 aa15.92■□□□□ 0.14
PDCD11-204ENST00000478543 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
PDCD11-204ENST00000478543 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
PDCD11-204ENST00000478543 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
PDCD11-204ENST00000478543 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
PDCD11-204ENST00000478543 NME9Q86XW9 330 aa15.91■□□□□ 0.14
PDCD11-204ENST00000478543 PTGER2P43116 358 aa15.9■□□□□ 0.14
PDCD11-204ENST00000478543 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
PDCD11-204ENST00000478543 MIER1Q8N108 512 aa15.9■□□□□ 0.14
PDCD11-204ENST00000478543 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
PDCD11-204ENST00000478543 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
PDCD11-204ENST00000478543 FYB1O15117 783 aa15.89■□□□□ 0.13
PDCD11-204ENST00000478543 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
PDCD11-204ENST00000478543 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
PDCD11-204ENST00000478543 NPC1L1Q9UHC9 1359 aa15.88■□□□□ 0.13
PDCD11-204ENST00000478543 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
PDCD11-204ENST00000478543 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
PDCD11-204ENST00000478543 NSD2O96028 1365 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 PIK3C2AO00443 1686 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 ZBTB7AO95365 584 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 PROM2Q8N271 834 aa15.87■□□□□ 0.13
PDCD11-204ENST00000478543 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
PDCD11-204ENST00000478543 IFFO2Q5TF58 517 aa15.86■□□□□ 0.13
PDCD11-204ENST00000478543 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
PDCD11-204ENST00000478543 C1QTNF8P60827 252 aa15.85■□□□□ 0.13
PDCD11-204ENST00000478543 RALBP1Q15311 655 aa15.85■□□□□ 0.13
PDCD11-204ENST00000478543 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
PDCD11-204ENST00000478543 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
PDCD11-204ENST00000478543 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
PDCD11-204ENST00000478543 ABTB2Q8N961 1025 aa15.84■□□□□ 0.13
PDCD11-204ENST00000478543 COG3Q96JB2 828 aa15.84■□□□□ 0.13
PDCD11-204ENST00000478543 PLSCR1O15162 318 aa15.83■□□□□ 0.12
PDCD11-204ENST00000478543 NLRP6P59044 892 aa15.83■□□□□ 0.12
PDCD11-204ENST00000478543 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
PDCD11-204ENST00000478543 CHD4Q14839 1912 aa15.83■□□□□ 0.12
PDCD11-204ENST00000478543 OVOS2A0A0J9YW53 1432 aa15.83■□□□□ 0.12
PDCD11-204ENST00000478543 OVOS2Q6IE36 1432 aa15.83■□□□□ 0.12
PDCD11-204ENST00000478543 EVA1CP58658 441 aa15.82■□□□□ 0.12
PDCD11-204ENST00000478543 SYT17Q9BSW7 474 aa15.82■□□□□ 0.12
PDCD11-204ENST00000478543 FHDC1Q9C0D6 1143 aaPredicted RBP15.82■□□□□ 0.12
PDCD11-204ENST00000478543 MYBBP1AQ9BQG0 1328 aaKnown RBP15.82■□□□□ 0.12
PDCD11-204ENST00000478543 OVOS2A0A0G2JMS6 1433 aa15.82■□□□□ 0.12
PDCD11-204ENST00000478543 CPDO75976 1380 aa15.81■□□□□ 0.12
PDCD11-204ENST00000478543 USP31Q70CQ4 1352 aa15.81■□□□□ 0.12
PDCD11-204ENST00000478543 SGIP1Q9BQI5 828 aa15.81■□□□□ 0.12
PDCD11-204ENST00000478543 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
PDCD11-204ENST00000478543 USP19O94966 1318 aa15.8■□□□□ 0.12
PDCD11-204ENST00000478543 SOX12O15370 315 aa15.8■□□□□ 0.12
PDCD11-204ENST00000478543 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
PDCD11-204ENST00000478543 USP54Q70EL1 1684 aa15.79■□□□□ 0.12
PDCD11-204ENST00000478543 FBLN1P23142 703 aa15.79■□□□□ 0.12
PDCD11-204ENST00000478543 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
PDCD11-204ENST00000478543 THRAP3Q9Y2W1 955 aaKnown RBP15.78■□□□□ 0.12
PDCD11-204ENST00000478543 CRB1P82279 1406 aa15.77■□□□□ 0.12
PDCD11-204ENST00000478543 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
PDCD11-204ENST00000478543 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
PDCD11-204ENST00000478543 COL18A1P39060 1754 aa15.75■□□□□ 0.11
PDCD11-204ENST00000478543 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
PDCD11-204ENST00000478543 MARCH10Q8NA82 808 aaPredicted RBP15.75■□□□□ 0.11
PDCD11-204ENST00000478543 SLIT3O75094 1523 aa15.74■□□□□ 0.11
PDCD11-204ENST00000478543 GCP02774 474 aa15.74■□□□□ 0.11
PDCD11-204ENST00000478543 RRS1Q15050 365 aaKnown RBP15.74■□□□□ 0.11
PDCD11-204ENST00000478543 PAPPAQ13219 1627 aa15.74■□□□□ 0.11
PDCD11-204ENST00000478543 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms