RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 WDR17Q8IZU2 1322 aa18.45■□□□□ 0.54
TDP2-204ENST00000478507 ARHGEF25Q86VW2 580 aa18.44■□□□□ 0.54
TDP2-204ENST00000478507 NFAT5O94916 1531 aa18.44■□□□□ 0.54
TDP2-204ENST00000478507 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
TDP2-204ENST00000478507 DDB1Q16531 1140 aa18.43■□□□□ 0.54
TDP2-204ENST00000478507 PTF1AQ7RTS3 328 aa18.43■□□□□ 0.54
TDP2-204ENST00000478507 TTC21BQ7Z4L5 1316 aa18.43■□□□□ 0.54
TDP2-204ENST00000478507 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
TDP2-204ENST00000478507 TOM1L2Q6ZVM7 507 aa18.42■□□□□ 0.54
TDP2-204ENST00000478507 ABCC6O95255 1503 aa18.41■□□□□ 0.54
TDP2-204ENST00000478507 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
TDP2-204ENST00000478507 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
TDP2-204ENST00000478507 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
TDP2-204ENST00000478507 SPON1Q9HCB6 807 aa18.41■□□□□ 0.54
TDP2-204ENST00000478507 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
TDP2-204ENST00000478507 KCNQ2O43526 872 aa18.4■□□□□ 0.54
TDP2-204ENST00000478507 CDCA7Q9BWT1 371 aaPredicted RBP18.4■□□□□ 0.54
TDP2-204ENST00000478507 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
TDP2-204ENST00000478507 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
TDP2-204ENST00000478507 USP54Q70EL1 1684 aa18.39■□□□□ 0.53
TDP2-204ENST00000478507 PROM2Q8N271 834 aa18.39■□□□□ 0.53
TDP2-204ENST00000478507 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
TDP2-204ENST00000478507 CARD10Q9BWT7 1032 aa18.39■□□□□ 0.53
TDP2-204ENST00000478507 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
TDP2-204ENST00000478507 NINLQ9Y2I6 1382 aa18.38■□□□□ 0.53
TDP2-204ENST00000478507 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
TDP2-204ENST00000478507 SBNO2Q9Y2G9 1366 aa18.36■□□□□ 0.53
TDP2-204ENST00000478507 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
TDP2-204ENST00000478507 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
TDP2-204ENST00000478507 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
TDP2-204ENST00000478507 UTRNP46939 3433 aa18.35■□□□□ 0.53
TDP2-204ENST00000478507 USP31Q70CQ4 1352 aa18.34■□□□□ 0.53
TDP2-204ENST00000478507 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
TDP2-204ENST00000478507 CCDC7Q96M83 1385 aa18.34■□□□□ 0.53
TDP2-204ENST00000478507 SOX12O15370 315 aa18.33■□□□□ 0.52
TDP2-204ENST00000478507 NHSQ6T4R5 1651 aa18.33■□□□□ 0.52
TDP2-204ENST00000478507 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
TDP2-204ENST00000478507 YY1P25490 414 aa18.31■□□□□ 0.52
TDP2-204ENST00000478507 LTN1O94822 1766 aa18.31■□□□□ 0.52
TDP2-204ENST00000478507 MYOM1P52179 1685 aa18.31■□□□□ 0.52
TDP2-204ENST00000478507 ERBB3P21860 1342 aa18.3■□□□□ 0.52
TDP2-204ENST00000478507 EXOC5O00471 708 aa18.3■□□□□ 0.52
TDP2-204ENST00000478507 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
TDP2-204ENST00000478507 PTGER2P43116 358 aa18.3■□□□□ 0.52
TDP2-204ENST00000478507 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
TDP2-204ENST00000478507 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
TDP2-204ENST00000478507 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
TDP2-204ENST00000478507 NME9Q86XW9 330 aa18.27■□□□□ 0.52
TDP2-204ENST00000478507 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
TDP2-204ENST00000478507 SLC15A2Q16348 729 aa18.26■□□□□ 0.51
TDP2-204ENST00000478507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■□□ 16.6
TDP2-204ENST00000478507 BTAF1O14981 1849 aa18.26■□□□□ 0.51
TDP2-204ENST00000478507 SGIP1Q9BQI5 828 aa18.25■□□□□ 0.51
TDP2-204ENST00000478507 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
TDP2-204ENST00000478507 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
TDP2-204ENST00000478507 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
TDP2-204ENST00000478507 IL2RBP14784 551 aa18.22■□□□□ 0.51
TDP2-204ENST00000478507 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
TDP2-204ENST00000478507 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
TDP2-204ENST00000478507 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
TDP2-204ENST00000478507 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
TDP2-204ENST00000478507 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
TDP2-204ENST00000478507 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
TDP2-204ENST00000478507 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
TDP2-204ENST00000478507 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
TDP2-204ENST00000478507 PUS7Q96PZ0 661 aaKnown RBP18.2■□□□□ 0.5
TDP2-204ENST00000478507 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
TDP2-204ENST00000478507 SYT17Q9BSW7 474 aa18.19■□□□□ 0.5
TDP2-204ENST00000478507 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
TDP2-204ENST00000478507 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
TDP2-204ENST00000478507 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
TDP2-204ENST00000478507 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
TDP2-204ENST00000478507 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
TDP2-204ENST00000478507 COL24A1Q17RW2 1714 aa18.17■□□□□ 0.5
TDP2-204ENST00000478507 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
TDP2-204ENST00000478507 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
TDP2-204ENST00000478507 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
TDP2-204ENST00000478507 IP6K1Q92551 441 aa18.16■□□□□ 0.5
TDP2-204ENST00000478507 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
TDP2-204ENST00000478507 GOLGB1Q14789 3259 aaKnown RBP18.16■□□□□ 0.5
TDP2-204ENST00000478507 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
TDP2-204ENST00000478507 TESK2Q96S53 571 aa18.15■□□□□ 0.5
TDP2-204ENST00000478507 CHD4Q14839 1912 aa18.15■□□□□ 0.5
TDP2-204ENST00000478507 AKT1S1Q96B36 256 aa18.13■□□□□ 0.49
TDP2-204ENST00000478507 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
TDP2-204ENST00000478507 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
TDP2-204ENST00000478507 ARXQ96QS3 562 aa18.12■□□□□ 0.49
TDP2-204ENST00000478507 LY75O60449 1722 aa18.12■□□□□ 0.49
TDP2-204ENST00000478507 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
TDP2-204ENST00000478507 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
TDP2-204ENST00000478507 NSD2O96028 1365 aa18.11■□□□□ 0.49
TDP2-204ENST00000478507 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
TDP2-204ENST00000478507 SLC27A3Q5K4L6 730 aa18.1■□□□□ 0.49
TDP2-204ENST00000478507 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
TDP2-204ENST00000478507 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
TDP2-204ENST00000478507 HOXC9P31274 260 aa18.09■□□□□ 0.49
TDP2-204ENST00000478507 MEGF6O75095 1541 aa18.08■□□□□ 0.49
TDP2-204ENST00000478507 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.49
TDP2-204ENST00000478507 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
TDP2-204ENST00000478507 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms