RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 OVOS2Q6IE36 1432 aa20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 ABCC6O95255 1503 aa20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 ARHGEF25Q86VW2 580 aa20.4■□□□□ 0.86
SMARCE1-209ENST00000478349 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
SMARCE1-209ENST00000478349 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.86
SMARCE1-209ENST00000478349 NINLQ9Y2I6 1382 aa20.39■□□□□ 0.85
SMARCE1-209ENST00000478349 SOX12O15370 315 aa20.39■□□□□ 0.85
SMARCE1-209ENST00000478349 DDB1Q16531 1140 aa20.39■□□□□ 0.85
SMARCE1-209ENST00000478349 AKAP12Q02952 1782 aa20.39■□□□□ 0.85
SMARCE1-209ENST00000478349 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
SMARCE1-209ENST00000478349 PARP4Q9UKK3 1724 aaKnown RBP20.38■□□□□ 0.85
SMARCE1-209ENST00000478349 LRP5O75197 1615 aa20.38■□□□□ 0.85
SMARCE1-209ENST00000478349 SRCAPQ6ZRS2 3230 aa20.38■□□□□ 0.85
SMARCE1-209ENST00000478349 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
SMARCE1-209ENST00000478349 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
SMARCE1-209ENST00000478349 CAMKK2Q96RR4 588 aa20.37■□□□□ 0.85
SMARCE1-209ENST00000478349 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
SMARCE1-209ENST00000478349 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
SMARCE1-209ENST00000478349 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
SMARCE1-209ENST00000478349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMARCE1-209ENST00000478349 R3HDM1Q15032 1099 aaKnown RBP20.35■□□□□ 0.85
SMARCE1-209ENST00000478349 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
SMARCE1-209ENST00000478349 NFAT5O94916 1531 aa20.35■□□□□ 0.85
SMARCE1-209ENST00000478349 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
SMARCE1-209ENST00000478349 AXIN2Q9Y2T1 843 aa20.33■□□□□ 0.85
SMARCE1-209ENST00000478349 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
SMARCE1-209ENST00000478349 COL18A1P39060 1754 aa20.31■□□□□ 0.84
SMARCE1-209ENST00000478349 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
SMARCE1-209ENST00000478349 NME9Q86XW9 330 aa20.3■□□□□ 0.84
SMARCE1-209ENST00000478349 SLC12A5Q9H2X9 1139 aa20.3■□□□□ 0.84
SMARCE1-209ENST00000478349 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
SMARCE1-209ENST00000478349 BCL9O00512 1426 aa20.29■□□□□ 0.84
SMARCE1-209ENST00000478349 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
SMARCE1-209ENST00000478349 ERBB3P21860 1342 aa20.28■□□□□ 0.84
SMARCE1-209ENST00000478349 ST20-MTHFSA0A0A6YYL1 179 aa20.28■□□□□ 0.84
SMARCE1-209ENST00000478349 EXOC5O00471 708 aa20.28■□□□□ 0.84
SMARCE1-209ENST00000478349 BCL11BQ9C0K0 894 aaPredicted RBP20.28■□□□□ 0.84
SMARCE1-209ENST00000478349 PLSCR1O15162 318 aa20.26■□□□□ 0.83
SMARCE1-209ENST00000478349 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
SMARCE1-209ENST00000478349 TESK2Q96S53 571 aa20.26■□□□□ 0.83
SMARCE1-209ENST00000478349 NLRP2Q9NX02 1062 aa20.26■□□□□ 0.83
SMARCE1-209ENST00000478349 TNS2Q63HR2 1409 aa20.26■□□□□ 0.83
SMARCE1-209ENST00000478349 TMF1P82094 1093 aa20.25■□□□□ 0.83
SMARCE1-209ENST00000478349 RREB1Q92766 1687 aa20.25■□□□□ 0.83
SMARCE1-209ENST00000478349 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
SMARCE1-209ENST00000478349 COG3Q96JB2 828 aa20.24■□□□□ 0.83
SMARCE1-209ENST00000478349 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
SMARCE1-209ENST00000478349 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
SMARCE1-209ENST00000478349 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
SMARCE1-209ENST00000478349 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
SMARCE1-209ENST00000478349 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
SMARCE1-209ENST00000478349 USP47Q96K76 1375 aa20.22■□□□□ 0.83
SMARCE1-209ENST00000478349 IL2RBP14784 551 aa20.22■□□□□ 0.83
SMARCE1-209ENST00000478349 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
SMARCE1-209ENST00000478349 TIMELESSQ9UNS1 1208 aa20.22■□□□□ 0.83
SMARCE1-209ENST00000478349 NUP188Q5SRE5 1749 aa20.21■□□□□ 0.83
SMARCE1-209ENST00000478349 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
SMARCE1-209ENST00000478349 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
SMARCE1-209ENST00000478349 IP6K1Q92551 441 aa20.18■□□□□ 0.82
SMARCE1-209ENST00000478349 SPON1Q9HCB6 807 aa20.17■□□□□ 0.82
SMARCE1-209ENST00000478349 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
SMARCE1-209ENST00000478349 AMPHP49418 695 aa20.16■□□□□ 0.82
SMARCE1-209ENST00000478349 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
SMARCE1-209ENST00000478349 LTN1O94822 1766 aa20.16■□□□□ 0.82
SMARCE1-209ENST00000478349 RGPD5Q99666 1765 aa20.15■□□□□ 0.82
SMARCE1-209ENST00000478349 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
SMARCE1-209ENST00000478349 FAM208AQ9UK61 1670 aaKnown RBP20.13■□□□□ 0.81
SMARCE1-209ENST00000478349 KCNQ2O43526 872 aa20.13■□□□□ 0.81
SMARCE1-209ENST00000478349 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
SMARCE1-209ENST00000478349 MAP3K19Q56UN5 1328 aa20.12■□□□□ 0.81
SMARCE1-209ENST00000478349 TXNRD1Q16881 649 aa20.12■□□□□ 0.81
SMARCE1-209ENST00000478349 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
SMARCE1-209ENST00000478349 HOXC9P31274 260 aa20.11■□□□□ 0.81
SMARCE1-209ENST00000478349 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
SMARCE1-209ENST00000478349 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
SMARCE1-209ENST00000478349 PTF1AQ7RTS3 328 aa20.09■□□□□ 0.81
SMARCE1-209ENST00000478349 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
SMARCE1-209ENST00000478349 NHSQ6T4R5 1651 aa20.09■□□□□ 0.81
SMARCE1-209ENST00000478349 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
SMARCE1-209ENST00000478349 KIF24Q5T7B8 1368 aa20.08■□□□□ 0.8
SMARCE1-209ENST00000478349 CGNL1Q0VF96 1302 aa20.06■□□□□ 0.8
SMARCE1-209ENST00000478349 FYB1O15117 783 aa20.06■□□□□ 0.8
SMARCE1-209ENST00000478349 SLC15A2Q16348 729 aa20.06■□□□□ 0.8
SMARCE1-209ENST00000478349 GGNBP2Q9H3C7 697 aa20.06■□□□□ 0.8
SMARCE1-209ENST00000478349 PROM2Q8N271 834 aa20.05■□□□□ 0.8
SMARCE1-209ENST00000478349 DDX54Q8TDD1 881 aaKnown RBP20.05■□□□□ 0.8
SMARCE1-209ENST00000478349 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
SMARCE1-209ENST00000478349 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
SMARCE1-209ENST00000478349 FLT4P35916 1363 aa20.04■□□□□ 0.8
SMARCE1-209ENST00000478349 RRS1Q15050 365 aaKnown RBP20.02■□□□□ 0.8
SMARCE1-209ENST00000478349 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
SMARCE1-209ENST00000478349 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
SMARCE1-209ENST00000478349 INSRP06213 1382 aa20.01■□□□□ 0.79
SMARCE1-209ENST00000478349 HMGB2P26583 209 aaKnown RBP20.01■□□□□ 0.79
SMARCE1-209ENST00000478349 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
SMARCE1-209ENST00000478349 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
SMARCE1-209ENST00000478349 MTFR1LQ9H019 292 aa20■□□□□ 0.79
SMARCE1-209ENST00000478349 ZBTB7AO95365 584 aa19.99■□□□□ 0.79
SMARCE1-209ENST00000478349 TATP17735 454 aaPredicted RBP19.99■□□□□ 0.79
SMARCE1-209ENST00000478349 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms