RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 SLC10A4Q96EP9 437 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 PCMTD1Q96MG8 357 aaPredicted RBP11.09□□□□□ -0.63
SYCP3-205ENST00000478238 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
SYCP3-205ENST00000478238 PTK2Q05397 1052 aa11.07□□□□□ -0.64
SYCP3-205ENST00000478238 NPAS3Q8IXF0 933 aa11.07□□□□□ -0.64
SYCP3-205ENST00000478238 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
SYCP3-205ENST00000478238 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
SYCP3-205ENST00000478238 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
SYCP3-205ENST00000478238 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
SYCP3-205ENST00000478238 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
SYCP3-205ENST00000478238 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
SYCP3-205ENST00000478238 UPP2O95045 317 aa11.05□□□□□ -0.64
SYCP3-205ENST00000478238 BMP2P12643 396 aa11.05□□□□□ -0.64
SYCP3-205ENST00000478238 VEGFBP49765 207 aa11.05□□□□□ -0.64
SYCP3-205ENST00000478238 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
SYCP3-205ENST00000478238 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
SYCP3-205ENST00000478238 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
SYCP3-205ENST00000478238 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
SYCP3-205ENST00000478238 H3BM21 787 aa11.03□□□□□ -0.64
SYCP3-205ENST00000478238 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
SYCP3-205ENST00000478238 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
SYCP3-205ENST00000478238 MAN1A2O60476 641 aa11.02□□□□□ -0.65
SYCP3-205ENST00000478238 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.65
SYCP3-205ENST00000478238 INSM1Q01101 510 aaPredicted RBP11.01□□□□□ -0.65
SYCP3-205ENST00000478238 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
SYCP3-205ENST00000478238 IRF7Q92985 503 aa11.01□□□□□ -0.65
SYCP3-205ENST00000478238 TSEN34Q9BSV6 310 aaKnown RBP11.01□□□□□ -0.65
SYCP3-205ENST00000478238 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
SYCP3-205ENST00000478238 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
SYCP3-205ENST00000478238 DHX9Q08211 1270 aaKnown RBP11□□□□□ -0.65
SYCP3-205ENST00000478238 CBLBQ13191 982 aa11□□□□□ -0.65
SYCP3-205ENST00000478238 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
SYCP3-205ENST00000478238 GMPRP36959 345 aa10.98□□□□□ -0.65
SYCP3-205ENST00000478238 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
SYCP3-205ENST00000478238 Q6ZVU0 165 aa10.98□□□□□ -0.65
SYCP3-205ENST00000478238 ERBB4Q15303 1308 aa10.98□□□□□ -0.65
SYCP3-205ENST00000478238 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
SYCP3-205ENST00000478238 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
SYCP3-205ENST00000478238 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
SYCP3-205ENST00000478238 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
SYCP3-205ENST00000478238 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
SYCP3-205ENST00000478238 SPINT1O43278 529 aa10.93□□□□□ -0.66
SYCP3-205ENST00000478238 RAB15P59190 212 aa10.93□□□□□ -0.66
SYCP3-205ENST00000478238 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
SYCP3-205ENST00000478238 AGBL1Q96MI9 1066 aa10.92□□□□□ -0.66
SYCP3-205ENST00000478238 ESPNB1AK53 854 aa10.91□□□□□ -0.66
SYCP3-205ENST00000478238 PPFIA3O75145 1194 aa10.91□□□□□ -0.66
SYCP3-205ENST00000478238 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
SYCP3-205ENST00000478238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
SYCP3-205ENST00000478238 ZNF784Q8NCA9 323 aaPredicted RBP10.91□□□□□ -0.66
SYCP3-205ENST00000478238 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
SYCP3-205ENST00000478238 FIGNL2A6NMB9 653 aa10.89□□□□□ -0.67
SYCP3-205ENST00000478238 ERVH48-1M5A8F1 160 aa10.89□□□□□ -0.67
SYCP3-205ENST00000478238 FBXO45P0C2W1 286 aa10.89□□□□□ -0.67
SYCP3-205ENST00000478238 RELBQ01201 579 aa10.89□□□□□ -0.67
SYCP3-205ENST00000478238 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
SYCP3-205ENST00000478238 LILRA1O75019 489 aa10.87□□□□□ -0.67
SYCP3-205ENST00000478238 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
SYCP3-205ENST00000478238 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
SYCP3-205ENST00000478238 PCDHB9Q9Y5E1 797 aa10.87□□□□□ -0.67
SYCP3-205ENST00000478238 ADH1AP07327 375 aa10.86□□□□□ -0.67
SYCP3-205ENST00000478238 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
SYCP3-205ENST00000478238 PTSQ03393 145 aa10.86□□□□□ -0.67
SYCP3-205ENST00000478238 INSM2Q96T92 566 aaPredicted RBP10.86□□□□□ -0.67
SYCP3-205ENST00000478238 ADD1P35611 737 aaKnown RBP10.85□□□□□ -0.67
SYCP3-205ENST00000478238 ZSCAN1Q8NBB4 408 aa10.85□□□□□ -0.67
SYCP3-205ENST00000478238 MTMR14Q8NCE2 650 aa10.85□□□□□ -0.67
SYCP3-205ENST00000478238 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
SYCP3-205ENST00000478238 SOCS7O14512 581 aa10.84□□□□□ -0.67
SYCP3-205ENST00000478238 GIGYF1O75420 1035 aaPredicted RBP10.83□□□□□ -0.68
SYCP3-205ENST00000478238 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
SYCP3-205ENST00000478238 POLMQ9NP87 494 aaPredicted RBP10.83□□□□□ -0.68
SYCP3-205ENST00000478238 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
SYCP3-205ENST00000478238 GPR37L1O60883 481 aa10.82□□□□□ -0.68
SYCP3-205ENST00000478238 NR1H3Q13133 447 aa10.82□□□□□ -0.68
SYCP3-205ENST00000478238 SNRKQ9NRH2 765 aa10.82□□□□□ -0.68
SYCP3-205ENST00000478238 PTGIRP43119 386 aa10.81□□□□□ -0.68
SYCP3-205ENST00000478238 RNF217Q8TC41 542 aa10.81□□□□□ -0.68
SYCP3-205ENST00000478238 NDUFB9Q9Y6M9 179 aa10.81□□□□□ -0.68
SYCP3-205ENST00000478238 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
SYCP3-205ENST00000478238 CCDC155Q8N6L0 562 aa10.8□□□□□ -0.68
SYCP3-205ENST00000478238 SLC35F4A4IF30 521 aa10.79□□□□□ -0.68
SYCP3-205ENST00000478238 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
SYCP3-205ENST00000478238 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
SYCP3-205ENST00000478238 APBB1O00213 710 aa10.78□□□□□ -0.68
SYCP3-205ENST00000478238 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
SYCP3-205ENST00000478238 CCDC125Q86Z20 511 aa10.77□□□□□ -0.69
SYCP3-205ENST00000478238 GPR161Q8N6U8 529 aaKnown RBP10.77□□□□□ -0.69
SYCP3-205ENST00000478238 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
SYCP3-205ENST00000478238 RNF20Q5VTR2 975 aa10.76□□□□□ -0.69
SYCP3-205ENST00000478238 NANOS1Q8WY41 292 aaKnown RBP10.76□□□□□ -0.69
SYCP3-205ENST00000478238 ZNF592Q92610 1267 aa10.76□□□□□ -0.69
SYCP3-205ENST00000478238 ATP5J2-PTCD1G3V325 749 aa10.74□□□□□ -0.69
SYCP3-205ENST00000478238 ITGA6P23229 1130 aa10.74□□□□□ -0.69
SYCP3-205ENST00000478238 ERVK-9P63128 1117 aa10.74□□□□□ -0.69
SYCP3-205ENST00000478238 SENP3-EIF4A1A0A087X0R7 540 aa10.73□□□□□ -0.69
SYCP3-205ENST00000478238 KRT76Q01546 638 aa10.73□□□□□ -0.69
SYCP3-205ENST00000478238 CC2D2BQ6DHV5 1058 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms