RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 WDR17Q8IZU2 1322 aa23.87■■□□□ 1.41
TRIM13-208ENST00000478111 TTC21AQ8NDW8 1320 aa23.87■■□□□ 1.41
TRIM13-208ENST00000478111 NFAT5O94916 1531 aa23.87■■□□□ 1.41
TRIM13-208ENST00000478111 TOM1L2Q6ZVM7 507 aa23.86■■□□□ 1.41
TRIM13-208ENST00000478111 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
TRIM13-208ENST00000478111 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
TRIM13-208ENST00000478111 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
TRIM13-208ENST00000478111 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
TRIM13-208ENST00000478111 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
TRIM13-208ENST00000478111 CD163L1Q9NR16 1453 aa23.84■■□□□ 1.41
TRIM13-208ENST00000478111 DDB1Q16531 1140 aa23.84■■□□□ 1.41
TRIM13-208ENST00000478111 C11orf95C9JLR9 678 aaPredicted RBP23.83■■□□□ 1.41
TRIM13-208ENST00000478111 USP54Q70EL1 1684 aa23.83■■□□□ 1.4
TRIM13-208ENST00000478111 SOX12O15370 315 aa23.82■■□□□ 1.4
TRIM13-208ENST00000478111 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
TRIM13-208ENST00000478111 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
TRIM13-208ENST00000478111 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
TRIM13-208ENST00000478111 CARD10Q9BWT7 1032 aa23.81■■□□□ 1.4
TRIM13-208ENST00000478111 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
TRIM13-208ENST00000478111 MARCH10Q8NA82 808 aaPredicted RBP23.8■■□□□ 1.4
TRIM13-208ENST00000478111 PTF1AQ7RTS3 328 aa23.79■■□□□ 1.4
TRIM13-208ENST00000478111 ABCC6O95255 1503 aa23.79■■□□□ 1.4
TRIM13-208ENST00000478111 CDCA7Q9BWT1 371 aaPredicted RBP23.78■■□□□ 1.4
TRIM13-208ENST00000478111 BCL9O00512 1426 aa23.77■■□□□ 1.4
TRIM13-208ENST00000478111 PLSCR1O15162 318 aa23.77■■□□□ 1.4
TRIM13-208ENST00000478111 NBPF14Q5TI25 921 aa23.77■■□□□ 1.4
TRIM13-208ENST00000478111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRIM13-208ENST00000478111 LTN1O94822 1766 aa23.76■■□□□ 1.39
TRIM13-208ENST00000478111 NME9Q86XW9 330 aa23.76■■□□□ 1.39
TRIM13-208ENST00000478111 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
TRIM13-208ENST00000478111 CSB-PGBD3P0DP91 1061 aa23.75■■□□□ 1.39
TRIM13-208ENST00000478111 SLC12A5Q9H2X9 1139 aa23.75■■□□□ 1.39
TRIM13-208ENST00000478111 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
TRIM13-208ENST00000478111 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
TRIM13-208ENST00000478111 PROM2Q8N271 834 aa23.72■■□□□ 1.39
TRIM13-208ENST00000478111 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
TRIM13-208ENST00000478111 PUS7Q96PZ0 661 aaKnown RBP23.71■■□□□ 1.39
TRIM13-208ENST00000478111 EDC4Q6P2E9 1401 aaKnown RBP23.7■■□□□ 1.38
TRIM13-208ENST00000478111 EXOC5O00471 708 aa23.7■■□□□ 1.38
TRIM13-208ENST00000478111 HDGFL2Q7Z4V5 671 aaPredicted RBP23.7■■□□□ 1.38
TRIM13-208ENST00000478111 A0A1W2PP64 1363 aa23.69■■□□□ 1.38
TRIM13-208ENST00000478111 ERBB3P21860 1342 aa23.69■■□□□ 1.38
TRIM13-208ENST00000478111 TESK2Q96S53 571 aa23.68■■□□□ 1.38
TRIM13-208ENST00000478111 ANO8Q9HCE9 1232 aaPredicted RBP23.68■■□□□ 1.38
TRIM13-208ENST00000478111 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
TRIM13-208ENST00000478111 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
TRIM13-208ENST00000478111 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
TRIM13-208ENST00000478111 ST20-MTHFSA0A0A6YYL1 179 aa23.64■■□□□ 1.37
TRIM13-208ENST00000478111 KCNQ2O43526 872 aa23.64■■□□□ 1.37
TRIM13-208ENST00000478111 SPON1Q9HCB6 807 aa23.64■■□□□ 1.37
TRIM13-208ENST00000478111 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
TRIM13-208ENST00000478111 NHSQ6T4R5 1651 aa23.64■■□□□ 1.37
TRIM13-208ENST00000478111 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
TRIM13-208ENST00000478111 PDGFDQ9GZP0 370 aaPredicted RBP23.62■■□□□ 1.37
TRIM13-208ENST00000478111 KAT6BQ8WYB5 2073 aa23.62■■□□□ 1.37
TRIM13-208ENST00000478111 TXNRD1Q16881 649 aa23.61■■□□□ 1.37
TRIM13-208ENST00000478111 IL2RBP14784 551 aa23.6■■□□□ 1.37
TRIM13-208ENST00000478111 IP6K1Q92551 441 aa23.59■■□□□ 1.37
TRIM13-208ENST00000478111 NINLQ9Y2I6 1382 aa23.58■■□□□ 1.37
TRIM13-208ENST00000478111 BTAF1O14981 1849 aa23.57■■□□□ 1.36
TRIM13-208ENST00000478111 ACSBG1Q96GR2 724 aa23.57■■□□□ 1.36
TRIM13-208ENST00000478111 FAM208AQ9UK61 1670 aaKnown RBP23.57■■□□□ 1.36
TRIM13-208ENST00000478111 PPP1R1BQ9UD71 204 aaPredicted RBP23.55■■□□□ 1.36
TRIM13-208ENST00000478111 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
TRIM13-208ENST00000478111 FBLN1P23142 703 aa23.54■■□□□ 1.36
TRIM13-208ENST00000478111 SLC15A2Q16348 729 aa23.54■■□□□ 1.36
TRIM13-208ENST00000478111 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
TRIM13-208ENST00000478111 PAPPAQ13219 1627 aa23.52■■□□□ 1.36
TRIM13-208ENST00000478111 COG3Q96JB2 828 aa23.52■■□□□ 1.36
TRIM13-208ENST00000478111 STK32BQ9NY57 414 aa23.52■■□□□ 1.36
TRIM13-208ENST00000478111 MAP3K19Q56UN5 1328 aa23.52■■□□□ 1.36
TRIM13-208ENST00000478111 ZBTB7AO95365 584 aa23.51■■□□□ 1.35
TRIM13-208ENST00000478111 PTGER2P43116 358 aa23.51■■□□□ 1.35
TRIM13-208ENST00000478111 LTV1Q96GA3 475 aaPredicted RBP23.51■■□□□ 1.35
TRIM13-208ENST00000478111 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
TRIM13-208ENST00000478111 UTRNP46939 3433 aa23.5■■□□□ 1.35
TRIM13-208ENST00000478111 HOXC9P31274 260 aa23.5■■□□□ 1.35
TRIM13-208ENST00000478111 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
TRIM13-208ENST00000478111 MYOM1P52179 1685 aa23.5■■□□□ 1.35
TRIM13-208ENST00000478111 SHANK3Q9BYB0 1731 aa23.48■■□□□ 1.35
TRIM13-208ENST00000478111 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
TRIM13-208ENST00000478111 FYB1O15117 783 aa23.47■■□□□ 1.35
TRIM13-208ENST00000478111 USP47Q96K76 1375 aa23.47■■□□□ 1.35
TRIM13-208ENST00000478111 LRRC4BQ9NT99 713 aa23.46■■□□□ 1.35
TRIM13-208ENST00000478111 TMF1P82094 1093 aa23.45■■□□□ 1.34
TRIM13-208ENST00000478111 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
TRIM13-208ENST00000478111 SGIP1Q9BQI5 828 aa23.45■■□□□ 1.34
TRIM13-208ENST00000478111 AMPHP49418 695 aa23.44■■□□□ 1.34
TRIM13-208ENST00000478111 GGNBP2Q9H3C7 697 aa23.43■■□□□ 1.34
TRIM13-208ENST00000478111 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
TRIM13-208ENST00000478111 RRS1Q15050 365 aaKnown RBP23.42■■□□□ 1.34
TRIM13-208ENST00000478111 ZNF827Q17R98 1081 aa23.42■■□□□ 1.34
TRIM13-208ENST00000478111 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
TRIM13-208ENST00000478111 MEGF6O75095 1541 aa23.42■■□□□ 1.34
TRIM13-208ENST00000478111 KIF20BQ96Q89 1820 aa23.42■■□□□ 1.34
TRIM13-208ENST00000478111 RTL1A6NKG5 1358 aa23.41■■□□□ 1.34
TRIM13-208ENST00000478111 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
TRIM13-208ENST00000478111 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
TRIM13-208ENST00000478111 YY1P25490 414 aa23.4■■□□□ 1.34
TRIM13-208ENST00000478111 LY75O60449 1722 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms