RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
NCKAP1-204ENST00000477988 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
NCKAP1-204ENST00000477988 CDC14CA4D256 554 aa9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 ADAMTS2O95450 1211 aa9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 CBLBQ13191 982 aa9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 PRPF38BQ5VTL8 546 aaKnown RBP9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 ARMC2Q8NEN0 867 aa9.77□□□□□ -0.85
NCKAP1-204ENST00000477988 AMHR2Q16671 573 aa9.76□□□□□ -0.85
NCKAP1-204ENST00000477988 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
NCKAP1-204ENST00000477988 MSTNO14793 375 aa9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 ITGB2P05107 769 aa9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 PLA2G4EQ3MJ16 856 aa9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 PPP1R26Q5T8A7 1209 aaPredicted RBP9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 KRTAP4-8Q9BYQ9 185 aa9.75□□□□□ -0.85
NCKAP1-204ENST00000477988 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
NCKAP1-204ENST00000477988 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
NCKAP1-204ENST00000477988 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
NCKAP1-204ENST00000477988 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
NCKAP1-204ENST00000477988 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
NCKAP1-204ENST00000477988 SPOCK3Q9BQ16 436 aa9.73□□□□□ -0.85
NCKAP1-204ENST00000477988 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
NCKAP1-204ENST00000477988 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
NCKAP1-204ENST00000477988 DCAF5Q96JK2 942 aa9.72□□□□□ -0.85
NCKAP1-204ENST00000477988 MAGEB6P1A0A0J9YX57 407 aa9.71□□□□□ -0.86
NCKAP1-204ENST00000477988 MAP3K10Q02779 954 aa9.71□□□□□ -0.86
NCKAP1-204ENST00000477988 ERFEQ4G0M1 354 aa9.71□□□□□ -0.86
NCKAP1-204ENST00000477988 PROCP04070 461 aa9.7□□□□□ -0.86
NCKAP1-204ENST00000477988 GAS6Q14393 721 aa9.7□□□□□ -0.86
NCKAP1-204ENST00000477988 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
NCKAP1-204ENST00000477988 ZMYND10O75800 440 aa9.69□□□□□ -0.86
NCKAP1-204ENST00000477988 RNF217Q8TC41 542 aa9.68□□□□□ -0.86
NCKAP1-204ENST00000477988 INSM2Q96T92 566 aaPredicted RBP9.68□□□□□ -0.86
NCKAP1-204ENST00000477988 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
NCKAP1-204ENST00000477988 CNTNAP5Q8WYK1 1306 aa9.67□□□□□ -0.86
NCKAP1-204ENST00000477988 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
NCKAP1-204ENST00000477988 GPKOWQ92917 476 aaPredicted RBP eCLIP9.67□□□□□ -0.862e-18■■■□□ 18.7
NCKAP1-204ENST00000477988 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
NCKAP1-204ENST00000477988 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
NCKAP1-204ENST00000477988 RELBQ01201 579 aa9.65□□□□□ -0.86
NCKAP1-204ENST00000477988 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
NCKAP1-204ENST00000477988 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
NCKAP1-204ENST00000477988 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
NCKAP1-204ENST00000477988 TSC1Q92574 1164 aa9.64□□□□□ -0.87
NCKAP1-204ENST00000477988 KCTD15Q96SI1 283 aaPredicted RBP9.64□□□□□ -0.87
NCKAP1-204ENST00000477988 QPCTQ16769 361 aa9.63□□□□□ -0.87
NCKAP1-204ENST00000477988 TUSC1Q2TAM9 212 aa9.63□□□□□ -0.87
NCKAP1-204ENST00000477988 BEND7Q8N7W2 519 aaPredicted RBP9.63□□□□□ -0.87
NCKAP1-204ENST00000477988 POLMQ9NP87 494 aaPredicted RBP9.63□□□□□ -0.87
NCKAP1-204ENST00000477988 CDV3Q9UKY7 258 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-204ENST00000477988 LILRB3O75022 631 aa9.62□□□□□ -0.87
NCKAP1-204ENST00000477988 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
NCKAP1-204ENST00000477988 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
NCKAP1-204ENST00000477988 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
NCKAP1-204ENST00000477988 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
NCKAP1-204ENST00000477988 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
NCKAP1-204ENST00000477988 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
NCKAP1-204ENST00000477988 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
NCKAP1-204ENST00000477988 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1-204ENST00000477988 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 GALNT6Q8NCL4 622 aa9.59□□□□□ -0.87
NCKAP1-204ENST00000477988 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 BCRP11274 1271 aa9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 HELBQ8NG08 1087 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 SLC10A4Q96EP9 437 aa9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 ARHGAP9Q9BRR9 750 aa9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 KRTAP9-2Q9BYQ4 174 aa9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 IGF1RP08069 1367 aa9.58□□□□□ -0.88
NCKAP1-204ENST00000477988 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
NCKAP1-204ENST00000477988 Q8N3U1 123 aa9.57□□□□□ -0.88
NCKAP1-204ENST00000477988 KDF1Q8NAX2 398 aaPredicted RBP9.57□□□□□ -0.88
NCKAP1-204ENST00000477988 GMCL1Q96IK5 515 aa9.57□□□□□ -0.88
NCKAP1-204ENST00000477988 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
NCKAP1-204ENST00000477988 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
NCKAP1-204ENST00000477988 ZNF837Q96EG3 531 aaPredicted RBP9.56□□□□□ -0.88
NCKAP1-204ENST00000477988 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
NCKAP1-204ENST00000477988 TRIM66O15016 1216 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 ADH1AP07327 375 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 LYSMD3Q7Z3D4 306 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 NEDD1Q8NHV4 660 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 LRRC4BQ9NT99 713 aa9.55□□□□□ -0.88
NCKAP1-204ENST00000477988 PTGIRP43119 386 aa9.54□□□□□ -0.88
NCKAP1-204ENST00000477988 ACDQ96AP0 544 aa9.54□□□□□ -0.88
NCKAP1-204ENST00000477988 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
NCKAP1-204ENST00000477988 BAG6P46379 1132 aa9.53□□□□□ -0.88
NCKAP1-204ENST00000477988 AK7Q96M32 723 aa9.53□□□□□ -0.88
NCKAP1-204ENST00000477988 OCSTAMPQ9BR26 566 aa9.53□□□□□ -0.88
NCKAP1-204ENST00000477988 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
NCKAP1-204ENST00000477988 KRTAP9-6A0A140TA67 174 aa9.52□□□□□ -0.89
NCKAP1-204ENST00000477988 GPR25O00155 361 aa9.52□□□□□ -0.89
NCKAP1-204ENST00000477988 LILRA1O75019 489 aa9.52□□□□□ -0.89
NCKAP1-204ENST00000477988 ZBTB33Q86T24 672 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms