RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 NME9Q86XW9 330 aa19.34■□□□□ 0.69
HDAC7-222ENST00000477937 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
HDAC7-222ENST00000477937 CRB1P82279 1406 aa19.34■□□□□ 0.69
HDAC7-222ENST00000477937 AXIN2Q9Y2T1 843 aa19.33■□□□□ 0.68
HDAC7-222ENST00000477937 NFAT5O94916 1531 aa19.33■□□□□ 0.68
HDAC7-222ENST00000477937 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
HDAC7-222ENST00000477937 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
HDAC7-222ENST00000477937 LTN1O94822 1766 aa19.32■□□□□ 0.68
HDAC7-222ENST00000477937 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
HDAC7-222ENST00000477937 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
HDAC7-222ENST00000477937 RGPD1P0DJD0 1748 aa19.31■□□□□ 0.68
HDAC7-222ENST00000477937 WDR17Q8IZU2 1322 aa19.29■□□□□ 0.68
HDAC7-222ENST00000477937 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
HDAC7-222ENST00000477937 FAM196AQ6ZSG2 479 aa19.29■□□□□ 0.68
HDAC7-222ENST00000477937 DEFB132Q7Z7B7 95 aa19.29■□□□□ 0.68
HDAC7-222ENST00000477937 ABCC6O95255 1503 aa19.29■□□□□ 0.68
HDAC7-222ENST00000477937 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
HDAC7-222ENST00000477937 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.68
HDAC7-222ENST00000477937 BAG6P46379 1132 aa19.27■□□□□ 0.68
HDAC7-222ENST00000477937 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
HDAC7-222ENST00000477937 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
HDAC7-222ENST00000477937 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
HDAC7-222ENST00000477937 COG3Q96JB2 828 aa19.24■□□□□ 0.67
HDAC7-222ENST00000477937 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
HDAC7-222ENST00000477937 TNS1Q9HBL0 1735 aaKnown RBP19.24■□□□□ 0.67
HDAC7-222ENST00000477937 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
HDAC7-222ENST00000477937 TRIM37O94972 964 aa19.22■□□□□ 0.67
HDAC7-222ENST00000477937 DDB1Q16531 1140 aa19.22■□□□□ 0.67
HDAC7-222ENST00000477937 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
HDAC7-222ENST00000477937 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
HDAC7-222ENST00000477937 CCDC7Q96M83 1385 aa19.2■□□□□ 0.66
HDAC7-222ENST00000477937 EIF4G2P78344 907 aaKnown RBP eCLIP19.2■□□□□ 0.665e-7■■□□□ 11.4
HDAC7-222ENST00000477937 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
HDAC7-222ENST00000477937 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
HDAC7-222ENST00000477937 MYOM1P52179 1685 aa19.2■□□□□ 0.66
HDAC7-222ENST00000477937 ERBB3P21860 1342 aa19.2■□□□□ 0.66
HDAC7-222ENST00000477937 FYB1O15117 783 aa19.19■□□□□ 0.66
HDAC7-222ENST00000477937 DISP2A7MBM2 1401 aa19.18■□□□□ 0.66
HDAC7-222ENST00000477937 ANKRD24Q8TF21 1146 aa19.18■□□□□ 0.66
HDAC7-222ENST00000477937 IP6K1Q92551 441 aa19.18■□□□□ 0.66
HDAC7-222ENST00000477937 NLRP2Q9NX02 1062 aa19.18■□□□□ 0.66
HDAC7-222ENST00000477937 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
HDAC7-222ENST00000477937 APBA3O96018 575 aa19.17■□□□□ 0.66
HDAC7-222ENST00000477937 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
HDAC7-222ENST00000477937 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
HDAC7-222ENST00000477937 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
HDAC7-222ENST00000477937 EXOC5O00471 708 aa19.16■□□□□ 0.66
HDAC7-222ENST00000477937 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
HDAC7-222ENST00000477937 AMPHP49418 695 aa19.15■□□□□ 0.66
HDAC7-222ENST00000477937 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
HDAC7-222ENST00000477937 FAM208AQ9UK61 1670 aaKnown RBP19.14■□□□□ 0.66
HDAC7-222ENST00000477937 FBLN1P23142 703 aa19.14■□□□□ 0.65
HDAC7-222ENST00000477937 EZH2Q15910 746 aaKnown RBP19.14■□□□□ 0.65
HDAC7-222ENST00000477937 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
HDAC7-222ENST00000477937 CARD14Q9BXL6 1004 aa19.14■□□□□ 0.65
HDAC7-222ENST00000477937 MARCH10Q8NA82 808 aaPredicted RBP19.13■□□□□ 0.65
HDAC7-222ENST00000477937 CAMKK2Q96RR4 588 aa19.13■□□□□ 0.65
HDAC7-222ENST00000477937 NSD3Q9BZ95 1437 aa19.12■□□□□ 0.65
HDAC7-222ENST00000477937 IL2RBP14784 551 aa19.12■□□□□ 0.65
HDAC7-222ENST00000477937 HOXC9P31274 260 aa19.12■□□□□ 0.65
HDAC7-222ENST00000477937 LTV1Q96GA3 475 aaPredicted RBP19.12■□□□□ 0.65
HDAC7-222ENST00000477937 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
HDAC7-222ENST00000477937 RRS1Q15050 365 aaKnown RBP19.1■□□□□ 0.65
HDAC7-222ENST00000477937 RGPD2P0DJD1 1756 aa19.1■□□□□ 0.65
HDAC7-222ENST00000477937 KAT6BQ8WYB5 2073 aa19.1■□□□□ 0.65
HDAC7-222ENST00000477937 TNS2Q63HR2 1409 aa19.09■□□□□ 0.65
HDAC7-222ENST00000477937 BCL9O00512 1426 aa19.08■□□□□ 0.65
HDAC7-222ENST00000477937 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
HDAC7-222ENST00000477937 BCL11BQ9C0K0 894 aaPredicted RBP19.08■□□□□ 0.64
HDAC7-222ENST00000477937 RREB1Q92766 1687 aa19.08■□□□□ 0.64
HDAC7-222ENST00000477937 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
HDAC7-222ENST00000477937 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
HDAC7-222ENST00000477937 PSDA5PKW4 1024 aaPredicted RBP19.06■□□□□ 0.64
HDAC7-222ENST00000477937 PLSCR1O15162 318 aa19.05■□□□□ 0.64
HDAC7-222ENST00000477937 RGPD3A6NKT7 1758 aaPredicted RBP19.05■□□□□ 0.64
HDAC7-222ENST00000477937 RGPD4Q7Z3J3 1758 aa19.05■□□□□ 0.64
HDAC7-222ENST00000477937 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
HDAC7-222ENST00000477937 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
HDAC7-222ENST00000477937 KIF24Q5T7B8 1368 aa19.04■□□□□ 0.64
HDAC7-222ENST00000477937 R3HDM1Q15032 1099 aaKnown RBP19.03■□□□□ 0.64
HDAC7-222ENST00000477937 INSRP06213 1382 aa19.03■□□□□ 0.64
HDAC7-222ENST00000477937 FLT4P35916 1363 aa19.03■□□□□ 0.64
HDAC7-222ENST00000477937 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
HDAC7-222ENST00000477937 NBPF14Q5TI25 921 aa19.02■□□□□ 0.64
HDAC7-222ENST00000477937 PTF1AQ7RTS3 328 aa19.02■□□□□ 0.64
HDAC7-222ENST00000477937 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
HDAC7-222ENST00000477937 PANK3Q9H999 370 aa19.01■□□□□ 0.63
HDAC7-222ENST00000477937 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
HDAC7-222ENST00000477937 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
HDAC7-222ENST00000477937 NBPF4Q96M43 638 aa19■□□□□ 0.63
HDAC7-222ENST00000477937 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
HDAC7-222ENST00000477937 NHSQ6T4R5 1651 aa19■□□□□ 0.63
HDAC7-222ENST00000477937 PPM1GO15355 546 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-222ENST00000477937 ACSBG1Q96GR2 724 aa18.99■□□□□ 0.63
HDAC7-222ENST00000477937 KCNQ2O43526 872 aa18.98■□□□□ 0.63
HDAC7-222ENST00000477937 LRP5O75197 1615 aa18.97■□□□□ 0.63
HDAC7-222ENST00000477937 USHBP1Q8N6Y0 703 aa18.97■□□□□ 0.63
HDAC7-222ENST00000477937 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
HDAC7-222ENST00000477937 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
HDAC7-222ENST00000477937 BTAF1O14981 1849 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms