RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.69
SYCP1-206ENST00000477590 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
SYCP1-206ENST00000477590 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
SYCP1-206ENST00000477590 GOPCQ9HD26 462 aa10.7□□□□□ -0.7
SYCP1-206ENST00000477590 UPP2O95045 317 aa10.69□□□□□ -0.7
SYCP1-206ENST00000477590 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
SYCP1-206ENST00000477590 SKIV2LQ15477 1246 aaKnown RBP10.68□□□□□ -0.7
SYCP1-206ENST00000477590 CCDC116Q8IYX3 515 aa10.68□□□□□ -0.7
SYCP1-206ENST00000477590 PROCA1Q8NCQ7 364 aaPredicted RBP10.68□□□□□ -0.7
SYCP1-206ENST00000477590 GPKOWQ92917 476 aaPredicted RBP eCLIP10.68□□□□□ -0.7
SYCP1-206ENST00000477590 SOS2Q07890 1332 aaPredicted RBP10.66□□□□□ -0.7
SYCP1-206ENST00000477590 NR6A1Q15406 480 aa10.66□□□□□ -0.7
SYCP1-206ENST00000477590 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
SYCP1-206ENST00000477590 EMILIN1Q9Y6C2 1016 aa10.66□□□□□ -0.7
SYCP1-206ENST00000477590 FAM181BA6NEQ2 426 aa10.65□□□□□ -0.7
SYCP1-206ENST00000477590 PDXDC2PQ6P474 469 aa10.65□□□□□ -0.7
SYCP1-206ENST00000477590 ARHGAP9Q9BRR9 750 aa10.65□□□□□ -0.7
SYCP1-206ENST00000477590 PPFIA3O75145 1194 aa10.64□□□□□ -0.71
SYCP1-206ENST00000477590 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
SYCP1-206ENST00000477590 CBLBQ13191 982 aa10.64□□□□□ -0.71
SYCP1-206ENST00000477590 FKBPLQ9UIM3 349 aa10.64□□□□□ -0.71
SYCP1-206ENST00000477590 PPP1R26Q5T8A7 1209 aaPredicted RBP10.63□□□□□ -0.71
SYCP1-206ENST00000477590 TSEN34Q9BSV6 310 aaKnown RBP10.63□□□□□ -0.71
SYCP1-206ENST00000477590 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYCP1-206ENST00000477590 KCTD15Q96SI1 283 aaPredicted RBP10.61□□□□□ -0.71
SYCP1-206ENST00000477590 OCSTAMPQ9BR26 566 aa10.61□□□□□ -0.71
SYCP1-206ENST00000477590 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
SYCP1-206ENST00000477590 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
SYCP1-206ENST00000477590 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
SYCP1-206ENST00000477590 FIGNL2A6NMB9 653 aa10.59□□□□□ -0.71
SYCP1-206ENST00000477590 TTLL8A6PVC2 850 aa10.59□□□□□ -0.71
SYCP1-206ENST00000477590 AP1G2O75843 785 aa10.59□□□□□ -0.71
SYCP1-206ENST00000477590 PPP2R2DQ66LE6 453 aa10.59□□□□□ -0.71
SYCP1-206ENST00000477590 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
SYCP1-206ENST00000477590 Q6ZVU0 165 aa10.58□□□□□ -0.72
SYCP1-206ENST00000477590 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.56□□□□□ -0.72
SYCP1-206ENST00000477590 INTS6LQ5JSJ4 861 aaKnown RBP10.56□□□□□ -0.72
SYCP1-206ENST00000477590 HMX1Q9NP08 348 aaPredicted RBP10.56□□□□□ -0.72
SYCP1-206ENST00000477590 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
SYCP1-206ENST00000477590 PTSQ03393 145 aa10.55□□□□□ -0.72
SYCP1-206ENST00000477590 PTK2Q05397 1052 aa10.55□□□□□ -0.72
SYCP1-206ENST00000477590 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
SYCP1-206ENST00000477590 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
SYCP1-206ENST00000477590 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
SYCP1-206ENST00000477590 SPINT1O43278 529 aa10.54□□□□□ -0.72
SYCP1-206ENST00000477590 GPR161Q8N6U8 529 aaKnown RBP10.54□□□□□ -0.72
SYCP1-206ENST00000477590 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
SYCP1-206ENST00000477590 RAB15P59190 212 aa10.52□□□□□ -0.73
SYCP1-206ENST00000477590 RELBQ01201 579 aa10.52□□□□□ -0.73
SYCP1-206ENST00000477590 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
SYCP1-206ENST00000477590 TMPRSS4Q9NRS4 437 aa10.52□□□□□ -0.73
SYCP1-206ENST00000477590 KRT76Q01546 638 aa10.51□□□□□ -0.73
SYCP1-206ENST00000477590 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
SYCP1-206ENST00000477590 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
SYCP1-206ENST00000477590 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
SYCP1-206ENST00000477590 INSM2Q96T92 566 aaPredicted RBP10.5□□□□□ -0.73
SYCP1-206ENST00000477590 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
SYCP1-206ENST00000477590 CCDC155Q8N6L0 562 aa10.49□□□□□ -0.73
SYCP1-206ENST00000477590 CNTNAP3BQ96NU0 1288 aa10.49□□□□□ -0.73
SYCP1-206ENST00000477590 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
SYCP1-206ENST00000477590 ZNF395Q9H8N7 513 aaPredicted RBP10.49□□□□□ -0.73
SYCP1-206ENST00000477590 RFC5P40937 340 aa10.48□□□□□ -0.73
SYCP1-206ENST00000477590 ZNF784Q8NCA9 323 aaPredicted RBP10.48□□□□□ -0.73
SYCP1-206ENST00000477590 SLC35F4A4IF30 521 aa10.47□□□□□ -0.73
SYCP1-206ENST00000477590 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
SYCP1-206ENST00000477590 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
SYCP1-206ENST00000477590 POLMQ9NP87 494 aaPredicted RBP10.47□□□□□ -0.73
SYCP1-206ENST00000477590 FLIIQ13045 1269 aa10.46□□□□□ -0.73
SYCP1-206ENST00000477590 TMEM259Q4ZIN3 620 aa10.46□□□□□ -0.73
SYCP1-206ENST00000477590 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
SYCP1-206ENST00000477590 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
SYCP1-206ENST00000477590 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
SYCP1-206ENST00000477590 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
SYCP1-206ENST00000477590 LILRA1O75019 489 aa10.44□□□□□ -0.74
SYCP1-206ENST00000477590 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
SYCP1-206ENST00000477590 ADH1AP07327 375 aa10.43□□□□□ -0.74
SYCP1-206ENST00000477590 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
SYCP1-206ENST00000477590 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
SYCP1-206ENST00000477590 ITGA6P23229 1130 aa10.42□□□□□ -0.74
SYCP1-206ENST00000477590 RNFT1Q5M7Z0 435 aa10.42□□□□□ -0.74
SYCP1-206ENST00000477590 VWA5B2Q8N398 1253 aa10.42□□□□□ -0.74
SYCP1-206ENST00000477590 KDF1Q8NAX2 398 aaPredicted RBP10.42□□□□□ -0.74
SYCP1-206ENST00000477590 CDC14CA4D256 554 aa10.41□□□□□ -0.74
SYCP1-206ENST00000477590 ESPNB1AK53 854 aa10.41□□□□□ -0.74
SYCP1-206ENST00000477590 BANK1Q8NDB2 785 aa10.41□□□□□ -0.74
SYCP1-206ENST00000477590 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
SYCP1-206ENST00000477590 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
SYCP1-206ENST00000477590 PTGIRP43119 386 aa10.39□□□□□ -0.75
SYCP1-206ENST00000477590 CYLDQ9NQC7 956 aa10.39□□□□□ -0.75
SYCP1-206ENST00000477590 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
SYCP1-206ENST00000477590 GSK3AP49840 483 aa10.37□□□□□ -0.75
SYCP1-206ENST00000477590 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
SYCP1-206ENST00000477590 APBB1O00213 710 aa10.36□□□□□ -0.75
SYCP1-206ENST00000477590 GIGYF1O75420 1035 aaPredicted RBP10.36□□□□□ -0.75
SYCP1-206ENST00000477590 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
SYCP1-206ENST00000477590 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
SYCP1-206ENST00000477590 MCM6Q14566 821 aa10.36□□□□□ -0.75
SYCP1-206ENST00000477590 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
SYCP1-206ENST00000477590 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
SYCP1-206ENST00000477590 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms