RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 COL18A1P39060 1754 aa9.65□□□□□ -0.86
RTFDC1-206ENST00000477485 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
RTFDC1-206ENST00000477485 SLIT3O75094 1523 aa9.65□□□□□ -0.86
RTFDC1-206ENST00000477485 LTN1O94822 1766 aa9.65□□□□□ -0.87
RTFDC1-206ENST00000477485 USP6P35125 1406 aa9.65□□□□□ -0.87
RTFDC1-206ENST00000477485 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
RTFDC1-206ENST00000477485 TRPM1Q7Z4N2 1603 aa9.64□□□□□ -0.87
RTFDC1-206ENST00000477485 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
RTFDC1-206ENST00000477485 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
RTFDC1-206ENST00000477485 CHD4Q14839 1912 aa9.64□□□□□ -0.87
RTFDC1-206ENST00000477485 ZBTB7AO95365 584 aa9.63□□□□□ -0.87
RTFDC1-206ENST00000477485 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
RTFDC1-206ENST00000477485 PTF1AQ7RTS3 328 aa9.62□□□□□ -0.87
RTFDC1-206ENST00000477485 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-206ENST00000477485 CPSF1Q10570 1443 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-206ENST00000477485 NHSQ6T4R5 1651 aa9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 STK32BQ9NY57 414 aa9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 ATF5Q9Y2D1 282 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 MON2Q7Z3U7 1717 aa9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 BTAF1O14981 1849 aa9.61□□□□□ -0.87
RTFDC1-206ENST00000477485 EVC2Q86UK5 1308 aa9.6□□□□□ -0.87
RTFDC1-206ENST00000477485 PLSCR1O15162 318 aa9.6□□□□□ -0.87
RTFDC1-206ENST00000477485 MARCH10Q8NA82 808 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-206ENST00000477485 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-206ENST00000477485 AXIN2Q9Y2T1 843 aa9.59□□□□□ -0.87
RTFDC1-206ENST00000477485 EXOC5O00471 708 aa9.58□□□□□ -0.88
RTFDC1-206ENST00000477485 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
RTFDC1-206ENST00000477485 KCNH5Q8NCM2 988 aa9.58□□□□□ -0.88
RTFDC1-206ENST00000477485 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
RTFDC1-206ENST00000477485 KTN1Q86UP2 1357 aaKnown RBP9.58□□□□□ -0.88
RTFDC1-206ENST00000477485 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 NFAT5O94916 1531 aa9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 TXNRD1Q16881 649 aa9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 CARD10Q9BWT7 1032 aa9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
RTFDC1-206ENST00000477485 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 CCDC7Q96M83 1385 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 SLC15A2Q16348 729 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 PROM2Q8N271 834 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 FHDC1Q9C0D6 1143 aaPredicted RBP9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 ABCC6O95255 1503 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
RTFDC1-206ENST00000477485 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
RTFDC1-206ENST00000477485 DOT1LQ8TEK3 1739 aa9.55□□□□□ -0.88
RTFDC1-206ENST00000477485 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
RTFDC1-206ENST00000477485 FAM208AQ9UK61 1670 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-206ENST00000477485 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 PTGER2P43116 358 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 L3MBTL2Q969R5 705 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 SYT17Q9BSW7 474 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 RGPD2P0DJD1 1756 aa9.54□□□□□ -0.88
RTFDC1-206ENST00000477485 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
RTFDC1-206ENST00000477485 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-206ENST00000477485 BCL9O00512 1426 aa9.53□□□□□ -0.88
RTFDC1-206ENST00000477485 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
RTFDC1-206ENST00000477485 IL2RBP14784 551 aa9.52□□□□□ -0.89
RTFDC1-206ENST00000477485 NME9Q86XW9 330 aa9.52□□□□□ -0.89
RTFDC1-206ENST00000477485 ARXQ96QS3 562 aa9.52□□□□□ -0.89
RTFDC1-206ENST00000477485 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
RTFDC1-206ENST00000477485 GPR162Q16538 588 aa9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 HDGFL2Q7Z4V5 671 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 LTV1Q96GA3 475 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 ERBB3P21860 1342 aa9.51□□□□□ -0.89
RTFDC1-206ENST00000477485 DDX54Q8TDD1 881 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-206ENST00000477485 LY75O60449 1722 aa9.5□□□□□ -0.89
RTFDC1-206ENST00000477485 MSH5O43196 834 aa9.49□□□□□ -0.89
RTFDC1-206ENST00000477485 KCNA4P22459 653 aa9.49□□□□□ -0.89
RTFDC1-206ENST00000477485 POLD1P28340 1107 aa9.49□□□□□ -0.89
RTFDC1-206ENST00000477485 ZNF827Q17R98 1081 aa9.49□□□□□ -0.89
RTFDC1-206ENST00000477485 SHANK3Q9BYB0 1731 aa9.48□□□□□ -0.89
RTFDC1-206ENST00000477485 CARD11Q9BXL7 1154 aa9.48□□□□□ -0.89
RTFDC1-206ENST00000477485 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 KCNQ4P56696 695 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 LRRC4BQ9NT99 713 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 C5P01031 1676 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 SBNO2Q9Y2G9 1366 aa9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 EDC4Q6P2E9 1401 aaKnown RBP9.47□□□□□ -0.89
RTFDC1-206ENST00000477485 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
RTFDC1-206ENST00000477485 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-206ENST00000477485 C1QTNF8P60827 252 aa9.46□□□□□ -0.9
RTFDC1-206ENST00000477485 SLC12A5Q9H2X9 1139 aa9.46□□□□□ -0.9
RTFDC1-206ENST00000477485 TERF2IPQ9NYB0 399 aa9.46□□□□□ -0.9
RTFDC1-206ENST00000477485 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms