RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 TCP11L2Q8N4U5 519 aa31.86■■■□□ 2.69
CNIH4-208ENST00000477413 TMC1Q8TDI8 760 aa31.85■■■□□ 2.69
CNIH4-208ENST00000477413 LTN1O94822 1766 aa31.84■■■□□ 2.69
CNIH4-208ENST00000477413 DISP2A7MBM2 1401 aa31.83■■■□□ 2.69
CNIH4-208ENST00000477413 ANKRD36BQ8N2N9 1353 aa31.82■■■□□ 2.69
CNIH4-208ENST00000477413 LRRC37A3O60309 1634 aa31.81■■■□□ 2.68
CNIH4-208ENST00000477413 WDR17Q8IZU2 1322 aa31.8■■■□□ 2.68
CNIH4-208ENST00000477413 TMF1P82094 1093 aa31.8■■■□□ 2.68
CNIH4-208ENST00000477413 NME9Q86XW9 330 aa31.8■■■□□ 2.68
CNIH4-208ENST00000477413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.8■■■□□ 2.68
CNIH4-208ENST00000477413 MYOM1P52179 1685 aa31.8■■■□□ 2.68
CNIH4-208ENST00000477413 AXIN2Q9Y2T1 843 aa31.79■■■□□ 2.68
CNIH4-208ENST00000477413 USP35Q9P2H5 1018 aa31.77■■■□□ 2.68
CNIH4-208ENST00000477413 PEAK1Q9H792 1746 aa31.76■■■□□ 2.67
CNIH4-208ENST00000477413 SF3B2Q13435 895 aaKnown RBP31.76■■■□□ 2.67
CNIH4-208ENST00000477413 ZRANB1Q9UGI0 708 aa31.76■■■□□ 2.67
CNIH4-208ENST00000477413 CDCA8Q53HL2 280 aa31.73■■■□□ 2.67
CNIH4-208ENST00000477413 FAM196AQ6ZSG2 479 aa31.72■■■□□ 2.67
CNIH4-208ENST00000477413 ZBTB7CA1YPR0 619 aa31.71■■■□□ 2.67
CNIH4-208ENST00000477413 DEFB132Q7Z7B7 95 aa31.71■■■□□ 2.67
CNIH4-208ENST00000477413 BAG6P46379 1132 aa31.69■■■□□ 2.66
CNIH4-208ENST00000477413 FAM182BQ5T319 152 aa31.69■■■□□ 2.66
CNIH4-208ENST00000477413 TOM1L2Q6ZVM7 507 aa31.69■■■□□ 2.66
CNIH4-208ENST00000477413 CARD10Q9BWT7 1032 aa31.69■■■□□ 2.66
CNIH4-208ENST00000477413 FAM208AQ9UK61 1670 aaKnown RBP31.69■■■□□ 2.66
CNIH4-208ENST00000477413 SOX12O15370 315 aa31.68■■■□□ 2.66
CNIH4-208ENST00000477413 CDCA7Q9BWT1 371 aaPredicted RBP31.68■■■□□ 2.66
CNIH4-208ENST00000477413 ERBB3P21860 1342 aa31.68■■■□□ 2.66
CNIH4-208ENST00000477413 CCDC7Q96M83 1385 aa31.68■■■□□ 2.66
CNIH4-208ENST00000477413 SRCAPQ6ZRS2 3230 aa31.68■■■□□ 2.66
CNIH4-208ENST00000477413 C11orf95C9JLR9 678 aaPredicted RBP31.67■■■□□ 2.66
CNIH4-208ENST00000477413 KIF20BQ96Q89 1820 aa31.67■■■□□ 2.66
CNIH4-208ENST00000477413 PDE3BQ13370 1112 aa31.66■■■□□ 2.66
CNIH4-208ENST00000477413 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
CNIH4-208ENST00000477413 BCL9O00512 1426 aa31.66■■■□□ 2.66
CNIH4-208ENST00000477413 OVOS2A0A0G2JMS6 1433 aa31.65■■■□□ 2.66
CNIH4-208ENST00000477413 SBF2Q86WG5 1849 aa31.64■■■□□ 2.66
CNIH4-208ENST00000477413 PARD3Q8TEW0 1356 aa31.63■■■□□ 2.65
CNIH4-208ENST00000477413 RREB1Q92766 1687 aa31.63■■■□□ 2.65
CNIH4-208ENST00000477413 RGPD3A6NKT7 1758 aaPredicted RBP31.62■■■□□ 2.65
CNIH4-208ENST00000477413 RGPD4Q7Z3J3 1758 aa31.62■■■□□ 2.65
CNIH4-208ENST00000477413 COG3Q96JB2 828 aa31.6■■■□□ 2.65
CNIH4-208ENST00000477413 TNS2Q63HR2 1409 aa31.59■■■□□ 2.65
CNIH4-208ENST00000477413 CSB-PGBD3P0DP91 1061 aa31.58■■■□□ 2.65
CNIH4-208ENST00000477413 DDB1Q16531 1140 aa31.58■■■□□ 2.65
CNIH4-208ENST00000477413 RTL1A6NKG5 1358 aa31.57■■■□□ 2.64
CNIH4-208ENST00000477413 TRIM37O94972 964 aa31.56■■■□□ 2.64
CNIH4-208ENST00000477413 IP6K1Q92551 441 aa31.56■■■□□ 2.64
CNIH4-208ENST00000477413 FYB1O15117 783 aa31.55■■■□□ 2.64
CNIH4-208ENST00000477413 EN1Q05925 392 aaPredicted RBP31.53■■■□□ 2.64
CNIH4-208ENST00000477413 CAMKK2Q96RR4 588 aa31.53■■■□□ 2.64
CNIH4-208ENST00000477413 NUP188Q5SRE5 1749 aa31.52■■■□□ 2.64
CNIH4-208ENST00000477413 MAP3K19Q56UN5 1328 aa31.52■■■□□ 2.64
CNIH4-208ENST00000477413 ANKRD24Q8TF21 1146 aa31.52■■■□□ 2.64
CNIH4-208ENST00000477413 ANKRD26Q9UPS8 1709 aa31.5■■■□□ 2.63
CNIH4-208ENST00000477413 EIF4G2P78344 907 aaKnown RBP eCLIP31.5■■■□□ 2.63
CNIH4-208ENST00000477413 NSD3Q9BZ95 1437 aa31.49■■■□□ 2.63
CNIH4-208ENST00000477413 LRP5O75197 1615 aa31.49■■■□□ 2.63
CNIH4-208ENST00000477413 KIF24Q5T7B8 1368 aa31.49■■■□□ 2.63
CNIH4-208ENST00000477413 CARD14Q9BXL6 1004 aa31.49■■■□□ 2.63
CNIH4-208ENST00000477413 MARCH10Q8NA82 808 aaPredicted RBP31.48■■■□□ 2.63
CNIH4-208ENST00000477413 HOXC9P31274 260 aa31.47■■■□□ 2.63
CNIH4-208ENST00000477413 APBA3O96018 575 aa31.46■■■□□ 2.63
CNIH4-208ENST00000477413 GGNBP2Q9H3C7 697 aa31.46■■■□□ 2.63
CNIH4-208ENST00000477413 NLRP2Q9NX02 1062 aa31.46■■■□□ 2.63
CNIH4-208ENST00000477413 NHSQ6T4R5 1651 aa31.45■■■□□ 2.63
CNIH4-208ENST00000477413 EZH2Q15910 746 aaKnown RBP31.45■■■□□ 2.63
CNIH4-208ENST00000477413 HSPA5P11021 654 aaKnown RBP31.44■■■□□ 2.62
CNIH4-208ENST00000477413 EXOC5O00471 708 aa31.43■■■□□ 2.62
CNIH4-208ENST00000477413 IL2RBP14784 551 aa31.43■■■□□ 2.62
CNIH4-208ENST00000477413 RGPD2P0DJD1 1756 aa31.43■■■□□ 2.62
CNIH4-208ENST00000477413 BCL11BQ9C0K0 894 aaPredicted RBP31.41■■■□□ 2.62
CNIH4-208ENST00000477413 AMPHP49418 695 aa31.39■■■□□ 2.62
CNIH4-208ENST00000477413 SHANK3Q9BYB0 1731 aa31.38■■■□□ 2.61
CNIH4-208ENST00000477413 PLSCR1O15162 318 aa31.38■■■□□ 2.61
CNIH4-208ENST00000477413 FBLN1P23142 703 aa31.38■■■□□ 2.61
CNIH4-208ENST00000477413 INSRP06213 1382 aa31.38■■■□□ 2.61
CNIH4-208ENST00000477413 FLT4P35916 1363 aa31.38■■■□□ 2.61
CNIH4-208ENST00000477413 CGNL1Q0VF96 1302 aa31.37■■■□□ 2.61
CNIH4-208ENST00000477413 RRS1Q15050 365 aaKnown RBP31.36■■■□□ 2.61
CNIH4-208ENST00000477413 SMG6Q86US8 1419 aaKnown RBP31.35■■■□□ 2.61
CNIH4-208ENST00000477413 NCAPD2Q15021 1401 aa31.32■■■□□ 2.6
CNIH4-208ENST00000477413 MEGF6O75095 1541 aa31.31■■■□□ 2.6
CNIH4-208ENST00000477413 PTF1AQ7RTS3 328 aa31.3■■■□□ 2.6
CNIH4-208ENST00000477413 LTV1Q96GA3 475 aaPredicted RBP31.3■■■□□ 2.6
CNIH4-208ENST00000477413 MAP2P11137 1827 aaKnown RBP31.3■■■□□ 2.6
CNIH4-208ENST00000477413 PSDA5PKW4 1024 aaPredicted RBP31.29■■■□□ 2.6
CNIH4-208ENST00000477413 BTAF1O14981 1849 aa31.28■■■□□ 2.6
CNIH4-208ENST00000477413 NSD2O96028 1365 aa31.28■■■□□ 2.6
CNIH4-208ENST00000477413 R3HDM1Q15032 1099 aaKnown RBP31.26■■■□□ 2.59
CNIH4-208ENST00000477413 HSP90AB2PQ58FF8 381 aa31.25■■■□□ 2.59
CNIH4-208ENST00000477413 NBPF6Q5VWK0 638 aa31.24■■■□□ 2.59
CNIH4-208ENST00000477413 NBPF4Q96M43 638 aa31.24■■■□□ 2.59
CNIH4-208ENST00000477413 EMILIN1Q9Y6C2 1016 aa31.23■■■□□ 2.59
CNIH4-208ENST00000477413 PKD1L3Q7Z443 1732 aa31.22■■■□□ 2.59
CNIH4-208ENST00000477413 DOT1LQ8TEK3 1739 aa31.22■■■□□ 2.59
CNIH4-208ENST00000477413 PAPPAQ13219 1627 aa31.21■■■□□ 2.59
CNIH4-208ENST00000477413 NBPF14Q5TI25 921 aa31.21■■■□□ 2.59
CNIH4-208ENST00000477413 WASHC2AQ641Q2 1341 aa31.21■■■□□ 2.59
CNIH4-208ENST00000477413 KCNQ2O43526 872 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms