RNA–Protein interactions for RNA: ENST00000477371.5

MRPL38-208, Transcript of mitochondrial ribosomal protein L38, human

TSL 2

Gene MRPL38, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL38-208	ENST00000477371	GJD4	Q96KN9	370 aa	Predicted RBP	14.02	□□□□□ -0.17
MRPL38-208	ENST00000477371	EVA1C	P58658	441 aa		14.01	□□□□□ -0.17
MRPL38-208	ENST00000477371	CNGB1	Q14028	1251 aa	Predicted RBP	14.01	□□□□□ -0.17
MRPL38-208	ENST00000477371	RRS1	Q15050	365 aa	Known RBP	14.01	□□□□□ -0.17
MRPL38-208	ENST00000477371	COL5A2	P05997	1499 aa	Predicted RBP	14	□□□□□ -0.17
MRPL38-208	ENST00000477371	MAP3K19	Q56UN5	1328 aa		14	□□□□□ -0.17
MRPL38-208	ENST00000477371	PER1	O15534	1290 aa	Predicted RBP	14	□□□□□ -0.17
MRPL38-208	ENST00000477371	TNNT2	P45379	298 aa	Predicted RBP	14	□□□□□ -0.17
MRPL38-208	ENST00000477371	LARP1	Q6PKG0	1096 aa	Known RBP	14	□□□□□ -0.17
MRPL38-208	ENST00000477371	KNSTRN	Q9Y448	316 aa		14	□□□□□ -0.17
MRPL38-208	ENST00000477371	ANKRD26	Q9UPS8	1709 aa		14	□□□□□ -0.17
MRPL38-208	ENST00000477371	RGS12	O14924	1447 aa		13.99	□□□□□ -0.17
MRPL38-208	ENST00000477371	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.99	□□□□□ -0.17
MRPL38-208	ENST00000477371	USP35	Q9P2H5	1018 aa		13.99	□□□□□ -0.17
MRPL38-208	ENST00000477371	SPATA31A5	Q5VU36	1347 aa		13.98	□□□□□ -0.17
MRPL38-208	ENST00000477371	SPATA31A7	Q8IWB4	1347 aa		13.98	□□□□□ -0.17
MRPL38-208	ENST00000477371	PEAK1	Q9H792	1746 aa		13.98	□□□□□ -0.17
MRPL38-208	ENST00000477371	CC2D1B	Q5T0F9	858 aa	Known RBP	13.97	□□□□□ -0.17
MRPL38-208	ENST00000477371	LTV1	Q96GA3	475 aa	Predicted RBP	13.97	□□□□□ -0.17
MRPL38-208	ENST00000477371	EMILIN1	Q9Y6C2	1016 aa		13.97	□□□□□ -0.17
MRPL38-208	ENST00000477371	SPATA31A1	Q5TZJ5	1347 aa		13.96	□□□□□ -0.17
MRPL38-208	ENST00000477371	HOXC9	P31274	260 aa		13.96	□□□□□ -0.17
MRPL38-208	ENST00000477371	AMPH	P49418	695 aa		13.96	□□□□□ -0.17
MRPL38-208	ENST00000477371	FAM98C	Q17RN3	349 aa	Known RBP	13.96	□□□□□ -0.17
MRPL38-208	ENST00000477371	IP6K1	Q92551	441 aa		13.96	□□□□□ -0.17
MRPL38-208	ENST00000477371	CSB-PGBD3	P0DP91	1061 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	TOM1L2	Q6ZVM7	507 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	MORC1	Q86VD1	984 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	ANKRD24	Q8TF21	1146 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	NSD2	O96028	1365 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	ABCC6	O95255	1503 aa		13.95	□□□□□ -0.18
MRPL38-208	ENST00000477371	WDR17	Q8IZU2	1322 aa		13.94	□□□□□ -0.18
MRPL38-208	ENST00000477371	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL38-208	ENST00000477371	PPM1G	O15355	546 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL38-208	ENST00000477371	MAP2	P11137	1827 aa	Known RBP	13.94	□□□□□ -0.18
MRPL38-208	ENST00000477371	CRB1	P82279	1406 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371		A0A0G2JS52	829 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	MYT1	Q01538	1121 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	DDX10	Q13206	875 aa	Known RBP	13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	HSP90AB2P	Q58FF8	381 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	SEPT12	Q8IYM1	358 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	POLK	Q9UBT6	870 aa		13.93	□□□□□ -0.18
MRPL38-208	ENST00000477371	ERBB3	P21860	1342 aa		13.92	□□□□□ -0.18
MRPL38-208	ENST00000477371	BRWD3	Q6RI45	1802 aa		13.92	□□□□□ -0.18
MRPL38-208	ENST00000477371	BLM	P54132	1417 aa	Predicted RBP	13.92	□□□□□ -0.18
MRPL38-208	ENST00000477371	RGPD2	P0DJD1	1756 aa		13.92	□□□□□ -0.18
MRPL38-208	ENST00000477371	ONECUT3	O60422	494 aa	Predicted RBP	13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	TCP11L2	Q8N4U5	519 aa		13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	NLRP2	Q9NX02	1062 aa		13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	RTL1	A6NKG5	1358 aa		13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	FLT4	P35916	1363 aa		13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	THSD7A	Q9UPZ6	1657 aa		13.91	□□□□□ -0.18
MRPL38-208	ENST00000477371	CARD10	Q9BWT7	1032 aa		13.9	□□□□□ -0.18
MRPL38-208	ENST00000477371	INSR	P06213	1382 aa		13.89	□□□□□ -0.19
MRPL38-208	ENST00000477371	BARGIN	Q6ZT62	677 aa		13.89	□□□□□ -0.19
MRPL38-208	ENST00000477371	WNK3	Q9BYP7	1800 aa		13.88	□□□□□ -0.19
MRPL38-208	ENST00000477371	NPC1L1	Q9UHC9	1359 aa		13.88	□□□□□ -0.19
MRPL38-208	ENST00000477371	FAM182B	Q5T319	152 aa		13.88	□□□□□ -0.19
MRPL38-208	ENST00000477371	USHBP1	Q8N6Y0	703 aa		13.88	□□□□□ -0.19
MRPL38-208	ENST00000477371	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.87	□□□□□ -0.19
MRPL38-208	ENST00000477371	NBPF6	Q5VWK0	638 aa		13.87	□□□□□ -0.19
MRPL38-208	ENST00000477371	NBPF4	Q96M43	638 aa		13.87	□□□□□ -0.19
MRPL38-208	ENST00000477371	THRAP3	Q9Y2W1	955 aa	Known RBP	13.87	□□□□□ -0.19
MRPL38-208	ENST00000477371	SMG6	Q86US8	1419 aa	Known RBP	13.87	□□□□□ -0.19
MRPL38-208	ENST00000477371	KIF24	Q5T7B8	1368 aa		13.86	□□□□□ -0.19
MRPL38-208	ENST00000477371	SOCS7	O14512	581 aa		13.86	□□□□□ -0.19
MRPL38-208	ENST00000477371	KRT27	Q7Z3Y8	459 aa		13.86	□□□□□ -0.19
MRPL38-208	ENST00000477371	FAM208A	Q9UK61	1670 aa	Known RBP	13.85	□□□□□ -0.19
MRPL38-208	ENST00000477371	DISP2	A7MBM2	1401 aa		13.85	□□□□□ -0.19
MRPL38-208	ENST00000477371	MTHFS	P49914	203 aa		13.85	□□□□□ -0.19
MRPL38-208	ENST00000477371	EIF4A2	Q14240	407 aa	Known RBP	13.85	□□□□□ -0.19
MRPL38-208	ENST00000477371	PARP4	Q9UKK3	1724 aa	Known RBP	13.84	□□□□□ -0.19
MRPL38-208	ENST00000477371	LRRC37A3	O60309	1634 aa		13.84	□□□□□ -0.19
MRPL38-208	ENST00000477371	IL2RB	P14784	551 aa		13.82	□□□□□ -0.2
MRPL38-208	ENST00000477371	DDB1	Q16531	1140 aa		13.82	□□□□□ -0.2
MRPL38-208	ENST00000477371	EYA1	Q99502	592 aa		13.82	□□□□□ -0.2
MRPL38-208	ENST00000477371	MEGF6	O75095	1541 aa		13.81	□□□□□ -0.2
MRPL38-208	ENST00000477371	PPP2R1A	P30153	589 aa		13.81	□□□□□ -0.2
MRPL38-208	ENST00000477371	PDE3B	Q13370	1112 aa		13.81	□□□□□ -0.2
MRPL38-208	ENST00000477371	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
MRPL38-208	ENST00000477371	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPL38-208	ENST00000477371	PARD3	Q8TEW0	1356 aa		13.8	□□□□□ -0.2
MRPL38-208	ENST00000477371	EXOC5	O00471	708 aa		13.79	□□□□□ -0.2
MRPL38-208	ENST00000477371	IL13	P35225	146 aa		13.79	□□□□□ -0.2
MRPL38-208	ENST00000477371	MARCH10	Q8NA82	808 aa	Predicted RBP	13.79	□□□□□ -0.2
MRPL38-208	ENST00000477371	AEBP1	Q8IUX7	1158 aa		13.78	□□□□□ -0.2
MRPL38-208	ENST00000477371	NCAPD2	Q15021	1401 aa		13.78	□□□□□ -0.2
MRPL38-208	ENST00000477371	TNS2	Q63HR2	1409 aa		13.78	□□□□□ -0.2
MRPL38-208	ENST00000477371	COL3A1	P02461	1466 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL38-208	ENST00000477371	RGPD1	P0DJD0	1748 aa		13.77	□□□□□ -0.21
MRPL38-208	ENST00000477371	IGSF1	Q8N6C5	1336 aa		13.77	□□□□□ -0.21
MRPL38-208	ENST00000477371	RAPGEF4	Q8WZA2	1011 aa		13.77	□□□□□ -0.21
MRPL38-208	ENST00000477371	SHANK3	Q9BYB0	1731 aa		13.76	□□□□□ -0.21
MRPL38-208	ENST00000477371	OVOS2	A0A0G2JMS6	1433 aa		13.76	□□□□□ -0.21
MRPL38-208	ENST00000477371	DIAPH1	O60610	1272 aa	Known RBP	13.76	□□□□□ -0.21
MRPL38-208	ENST00000477371	TAT	P17735	454 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL38-208	ENST00000477371	DDX54	Q8TDD1	881 aa	Known RBP	13.76	□□□□□ -0.21
MRPL38-208	ENST00000477371	FAM196A	Q6ZSG2	479 aa		13.75	□□□□□ -0.21
MRPL38-208	ENST00000477371	TRIM37	O94972	964 aa		13.74	□□□□□ -0.21
MRPL38-208	ENST00000477371	HMOX1	P09601	288 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms