RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HS1BP3Q53T59 392 aa19.05■□□□□ 0.64
CLSTN1-205ENST00000477264 TNPO1Q92973 898 aaKnown RBP19.05■□□□□ 0.64
CLSTN1-205ENST00000477264 DIP2AQ14689 1571 aa19.05■□□□□ 0.64
CLSTN1-205ENST00000477264 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
CLSTN1-205ENST00000477264 MED14O60244 1454 aa19.04■□□□□ 0.64
CLSTN1-205ENST00000477264 SRPK2P78362 688 aaKnown RBP19.04■□□□□ 0.64
CLSTN1-205ENST00000477264 ZKSCAN2Q63HK3 967 aa19.04■□□□□ 0.64
CLSTN1-205ENST00000477264 WAPLQ7Z5K2 1190 aa19.04■□□□□ 0.64
CLSTN1-205ENST00000477264 TECPR2O15040 1411 aa19.04■□□□□ 0.64
CLSTN1-205ENST00000477264 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
CLSTN1-205ENST00000477264 SIRT1Q96EB6 747 aa19.03■□□□□ 0.64
CLSTN1-205ENST00000477264 CPS1P31327 1500 aa19.03■□□□□ 0.64
CLSTN1-205ENST00000477264 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
CLSTN1-205ENST00000477264 CLEC17AQ6ZS10 378 aa19.03■□□□□ 0.64
CLSTN1-205ENST00000477264 GAS2L3Q86XJ1 694 aa19.02■□□□□ 0.64
CLSTN1-205ENST00000477264 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
CLSTN1-205ENST00000477264 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-205ENST00000477264 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-205ENST00000477264 MTERF4Q7Z6M4 381 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-205ENST00000477264 DZIP1LQ8IYY4 767 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-205ENST00000477264 NASPP49321 788 aaPredicted RBP19.01■□□□□ 0.63
CLSTN1-205ENST00000477264 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
CLSTN1-205ENST00000477264 KIF16BQ96L93 1317 aa19.01■□□□□ 0.63
CLSTN1-205ENST00000477264 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
CLSTN1-205ENST00000477264 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
CLSTN1-205ENST00000477264 CDK19Q9BWU1 502 aa18.99■□□□□ 0.63
CLSTN1-205ENST00000477264 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
CLSTN1-205ENST00000477264 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
CLSTN1-205ENST00000477264 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
CLSTN1-205ENST00000477264 TNNQ9UQP3 1299 aa18.97■□□□□ 0.63
CLSTN1-205ENST00000477264 AMOTL2Q9Y2J4 779 aa18.97■□□□□ 0.63
CLSTN1-205ENST00000477264 ROBO2Q9HCK4 1378 aa18.97■□□□□ 0.63
CLSTN1-205ENST00000477264 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
CLSTN1-205ENST00000477264 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
CLSTN1-205ENST00000477264 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
CLSTN1-205ENST00000477264 ZNF445P59923 1031 aa18.95■□□□□ 0.62
CLSTN1-205ENST00000477264 K7ELQ4 463 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-205ENST00000477264 ZNF500O60304 480 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-205ENST00000477264 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
CLSTN1-205ENST00000477264 CFAP53Q96M91 514 aa18.93■□□□□ 0.62
CLSTN1-205ENST00000477264 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
CLSTN1-205ENST00000477264 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
CLSTN1-205ENST00000477264 PTCH1Q13635 1447 aa18.92■□□□□ 0.62
CLSTN1-205ENST00000477264 CSPP1Q1MSJ5 1256 aa18.92■□□□□ 0.62
CLSTN1-205ENST00000477264 BMP2KLQ5H9B9 411 aa18.92■□□□□ 0.62
CLSTN1-205ENST00000477264 BCL2L13Q9BXK5 485 aa18.92■□□□□ 0.62
CLSTN1-205ENST00000477264 MCM5P33992 734 aa18.92■□□□□ 0.62
CLSTN1-205ENST00000477264 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-205ENST00000477264 RIPK4P57078 832 aa18.91■□□□□ 0.62
CLSTN1-205ENST00000477264 NUCB1Q02818 461 aa18.91■□□□□ 0.62
CLSTN1-205ENST00000477264 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
CLSTN1-205ENST00000477264 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
CLSTN1-205ENST00000477264 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
CLSTN1-205ENST00000477264 NSD2O96028 1365 aa18.9■□□□□ 0.62
CLSTN1-205ENST00000477264 SMAP1Q8IYB5 467 aaPredicted RBP18.9■□□□□ 0.62
CLSTN1-205ENST00000477264 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
CLSTN1-205ENST00000477264 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.62
CLSTN1-205ENST00000477264 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 PRDM4Q9UKN5 801 aa18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 DDX49Q9Y6V7 483 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.89■□□□□ 0.61
CLSTN1-205ENST00000477264 DYNC1I1O14576 645 aa18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 ATF7IPQ6VMQ6 1270 aa18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 PDLIM2Q96JY6 352 aa18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
CLSTN1-205ENST00000477264 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 TRIM27P14373 513 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 KCNA6P17658 529 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 ITPRIPQ8IWB1 547 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 IL16Q14005 1332 aa18.87■□□□□ 0.61
CLSTN1-205ENST00000477264 KIF2CQ99661 725 aa18.86■□□□□ 0.61
CLSTN1-205ENST00000477264 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
CLSTN1-205ENST00000477264 NUCB2P80303 420 aa18.85■□□□□ 0.61
CLSTN1-205ENST00000477264 NUDT16Q96DE0 195 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-205ENST00000477264 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-205ENST00000477264 ZBTB40Q9NUA8 1239 aa18.85■□□□□ 0.61
CLSTN1-205ENST00000477264 IPO8O15397 1037 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-205ENST00000477264 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
CLSTN1-205ENST00000477264 CCDC61Q9Y6R9 512 aa18.84■□□□□ 0.61
CLSTN1-205ENST00000477264 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
CLSTN1-205ENST00000477264 ATP7BP35670 1465 aa18.84■□□□□ 0.61
CLSTN1-205ENST00000477264 SSFA2P28290 1259 aa18.83■□□□□ 0.61
CLSTN1-205ENST00000477264 R3HCC1Q9Y3T6 440 aaKnown RBP18.83■□□□□ 0.61
CLSTN1-205ENST00000477264 CD163L1Q9NR16 1453 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 UQCRHLA0A096LP55 91 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 UQCRHP07919 91 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 ZKSCAN5Q9Y2L8 839 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 AK9Q5TCS8 1911 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
CLSTN1-205ENST00000477264 SASS6Q6UVJ0 657 aa18.81■□□□□ 0.6
CLSTN1-205ENST00000477264 CCDC39Q9UFE4 941 aa18.81■□□□□ 0.6
CLSTN1-205ENST00000477264 FAM13BQ9NYF5 915 aa18.8■□□□□ 0.6
CLSTN1-205ENST00000477264 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms