RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 EDC4Q6P2E9 1401 aaKnown RBP29.97■■■□□ 2.39
LIMK1-204ENST00000476792 PDE3BQ13370 1112 aa29.97■■■□□ 2.39
LIMK1-204ENST00000476792 USP31Q70CQ4 1352 aa29.97■■■□□ 2.39
LIMK1-204ENST00000476792 COL18A1P39060 1754 aa29.97■■■□□ 2.39
LIMK1-204ENST00000476792 CSB-PGBD3P0DP91 1061 aa29.96■■■□□ 2.39
LIMK1-204ENST00000476792 THRAP3Q9Y2W1 955 aaKnown RBP29.96■■■□□ 2.39
LIMK1-204ENST00000476792 NFAT5O94916 1531 aa29.95■■■□□ 2.38
LIMK1-204ENST00000476792 NINLQ9Y2I6 1382 aa29.93■■■□□ 2.38
LIMK1-204ENST00000476792 BAG6P46379 1132 aa29.93■■■□□ 2.38
LIMK1-204ENST00000476792 FAM196AQ6ZSG2 479 aa29.92■■■□□ 2.38
LIMK1-204ENST00000476792 RGPD5Q99666 1765 aa29.92■■■□□ 2.38
LIMK1-204ENST00000476792 WDR17Q8IZU2 1322 aa29.92■■■□□ 2.38
LIMK1-204ENST00000476792 TRIM37O94972 964 aa29.9■■■□□ 2.38
LIMK1-204ENST00000476792 EN1Q05925 392 aaPredicted RBP29.88■■■□□ 2.37
LIMK1-204ENST00000476792 USP54Q70EL1 1684 aa29.85■■■□□ 2.37
LIMK1-204ENST00000476792 RGPD1P0DJD0 1748 aa29.85■■■□□ 2.37
LIMK1-204ENST00000476792 CDCA8Q53HL2 280 aa29.85■■■□□ 2.37
LIMK1-204ENST00000476792 ANKRD36BQ8N2N9 1353 aa29.85■■■□□ 2.37
LIMK1-204ENST00000476792 OVOS2A0A0J9YW53 1432 aa29.83■■■□□ 2.37
LIMK1-204ENST00000476792 OVOS2Q6IE36 1432 aa29.83■■■□□ 2.37
LIMK1-204ENST00000476792 DDB1Q16531 1140 aa29.83■■■□□ 2.37
LIMK1-204ENST00000476792 COG3Q96JB2 828 aa29.83■■■□□ 2.37
LIMK1-204ENST00000476792 CARD10Q9BWT7 1032 aa29.83■■■□□ 2.37
LIMK1-204ENST00000476792 PARP4Q9UKK3 1724 aaKnown RBP29.82■■■□□ 2.36
LIMK1-204ENST00000476792 LTN1O94822 1766 aa29.81■■■□□ 2.36
LIMK1-204ENST00000476792 APBA3O96018 575 aa29.8■■■□□ 2.36
LIMK1-204ENST00000476792 NLRP2Q9NX02 1062 aa29.8■■■□□ 2.36
LIMK1-204ENST00000476792 ABCC6O95255 1503 aa29.78■■■□□ 2.36
LIMK1-204ENST00000476792 TNS1Q9HBL0 1735 aaKnown RBP29.78■■■□□ 2.36
LIMK1-204ENST00000476792 FBLN1P23142 703 aa29.77■■■□□ 2.36
LIMK1-204ENST00000476792 EZH2Q15910 746 aaKnown RBP29.77■■■□□ 2.36
LIMK1-204ENST00000476792 ANKRD24Q8TF21 1146 aa29.77■■■□□ 2.36
LIMK1-204ENST00000476792 POLR3GLQ9BT43 218 aa29.77■■■□□ 2.36
LIMK1-204ENST00000476792 CDCA7Q9BWT1 371 aaPredicted RBP29.77■■■□□ 2.36
LIMK1-204ENST00000476792 ERBB3P21860 1342 aa29.76■■■□□ 2.36
LIMK1-204ENST00000476792 LRRC37A3O60309 1634 aa29.76■■■□□ 2.35
LIMK1-204ENST00000476792 GGNBP2Q9H3C7 697 aa29.76■■■□□ 2.35
LIMK1-204ENST00000476792 LTV1Q96GA3 475 aaPredicted RBP29.75■■■□□ 2.35
LIMK1-204ENST00000476792 CCDC7Q96M83 1385 aa29.75■■■□□ 2.35
LIMK1-204ENST00000476792 PSDA5PKW4 1024 aaPredicted RBP29.73■■■□□ 2.35
LIMK1-204ENST00000476792 FYB1O15117 783 aa29.73■■■□□ 2.35
LIMK1-204ENST00000476792 IP6K1Q92551 441 aa29.73■■■□□ 2.35
LIMK1-204ENST00000476792 WNK3Q9BYP7 1800 aa29.73■■■□□ 2.35
LIMK1-204ENST00000476792 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
LIMK1-204ENST00000476792 DISP2A7MBM2 1401 aa29.72■■■□□ 2.35
LIMK1-204ENST00000476792 MARCH10Q8NA82 808 aaPredicted RBP29.72■■■□□ 2.35
LIMK1-204ENST00000476792 MAP3K19Q56UN5 1328 aa29.71■■■□□ 2.35
LIMK1-204ENST00000476792 EXOC5O00471 708 aa29.71■■■□□ 2.35
LIMK1-204ENST00000476792 AMPHP49418 695 aa29.71■■■□□ 2.35
LIMK1-204ENST00000476792 CAMKK2Q96RR4 588 aa29.71■■■□□ 2.35
LIMK1-204ENST00000476792 HSPA5P11021 654 aaKnown RBP29.7■■■□□ 2.35
LIMK1-204ENST00000476792 EIF4G2P78344 907 aaKnown RBP eCLIP29.7■■■□□ 2.35
LIMK1-204ENST00000476792 C11orf95C9JLR9 678 aaPredicted RBP29.69■■■□□ 2.34
LIMK1-204ENST00000476792 CARD14Q9BXL6 1004 aa29.69■■■□□ 2.34
LIMK1-204ENST00000476792 RRS1Q15050 365 aaKnown RBP29.67■■■□□ 2.34
LIMK1-204ENST00000476792 PEAK1Q9H792 1746 aa29.66■■■□□ 2.34
LIMK1-204ENST00000476792 HOXC9P31274 260 aa29.66■■■□□ 2.34
LIMK1-204ENST00000476792 MYOM1P52179 1685 aa29.66■■■□□ 2.34
LIMK1-204ENST00000476792 IL2RBP14784 551 aa29.65■■■□□ 2.34
LIMK1-204ENST00000476792 NSD3Q9BZ95 1437 aa29.64■■■□□ 2.34
LIMK1-204ENST00000476792 PTF1AQ7RTS3 328 aa29.64■■■□□ 2.34
LIMK1-204ENST00000476792 R3HDM1Q15032 1099 aaKnown RBP29.63■■■□□ 2.33
LIMK1-204ENST00000476792 KIF20BQ96Q89 1820 aa29.61■■■□□ 2.33
LIMK1-204ENST00000476792 PARD3Q8TEW0 1356 aa29.61■■■□□ 2.33
LIMK1-204ENST00000476792 TNS2Q63HR2 1409 aa29.61■■■□□ 2.33
LIMK1-204ENST00000476792 SBF2Q86WG5 1849 aa29.59■■■□□ 2.33
LIMK1-204ENST00000476792 BCL11BQ9C0K0 894 aaPredicted RBP29.59■■■□□ 2.33
LIMK1-204ENST00000476792 RTL1A6NKG5 1358 aa29.55■■■□□ 2.32
LIMK1-204ENST00000476792 ACSBG1Q96GR2 724 aa29.55■■■□□ 2.32
LIMK1-204ENST00000476792 BCL9O00512 1426 aa29.54■■■□□ 2.32
LIMK1-204ENST00000476792 NBPF14Q5TI25 921 aa29.53■■■□□ 2.32
LIMK1-204ENST00000476792 CGNL1Q0VF96 1302 aa29.52■■■□□ 2.32
LIMK1-204ENST00000476792 KCNQ2O43526 872 aa29.52■■■□□ 2.32
LIMK1-204ENST00000476792 HSP90AB2PQ58FF8 381 aa29.52■■■□□ 2.32
LIMK1-204ENST00000476792 DDX54Q8TDD1 881 aaKnown RBP29.52■■■□□ 2.32
LIMK1-204ENST00000476792 RREB1Q92766 1687 aa29.52■■■□□ 2.32
LIMK1-204ENST00000476792 FAM208AQ9UK61 1670 aaKnown RBP29.52■■■□□ 2.32
LIMK1-204ENST00000476792 RGPD2P0DJD1 1756 aa29.52■■■□□ 2.32
LIMK1-204ENST00000476792 USHBP1Q8N6Y0 703 aa29.51■■■□□ 2.31
LIMK1-204ENST00000476792 KAT6BQ8WYB5 2073 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 PLSCR1O15162 318 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 PPM1GO15355 546 aaPredicted RBP29.5■■■□□ 2.31
LIMK1-204ENST00000476792 NBPF6Q5VWK0 638 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 NBPF4Q96M43 638 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 EMILIN1Q9Y6C2 1016 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 NUP188Q5SRE5 1749 aa29.5■■■□□ 2.31
LIMK1-204ENST00000476792 PANK3Q9H999 370 aa29.49■■■□□ 2.31
LIMK1-204ENST00000476792 SMG6Q86US8 1419 aaKnown RBP29.48■■■□□ 2.31
LIMK1-204ENST00000476792 FLT4P35916 1363 aa29.48■■■□□ 2.31
LIMK1-204ENST00000476792 INSRP06213 1382 aa29.45■■■□□ 2.31
LIMK1-204ENST00000476792 TNNT2P45379 298 aaPredicted RBP29.45■■■□□ 2.31
LIMK1-204ENST00000476792 PROM2Q8N271 834 aa29.44■■■□□ 2.3
LIMK1-204ENST00000476792 ZCRB1Q8TBF4 217 aaKnown RBP29.43■■■□□ 2.3
LIMK1-204ENST00000476792 MEGF6O75095 1541 aa29.42■■■□□ 2.3
LIMK1-204ENST00000476792 KIF24Q5T7B8 1368 aa29.41■■■□□ 2.3
LIMK1-204ENST00000476792 TXNRD1Q16881 649 aa29.41■■■□□ 2.3
LIMK1-204ENST00000476792 RAPGEF4Q8WZA2 1011 aa29.41■■■□□ 2.3
LIMK1-204ENST00000476792 NHSQ6T4R5 1651 aa29.4■■■□□ 2.3
LIMK1-204ENST00000476792 RGPD3A6NKT7 1758 aaPredicted RBP29.4■■■□□ 2.3
LIMK1-204ENST00000476792 RGPD4Q7Z3J3 1758 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms