RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 MMP16P51512 607 aa6.96□□□□□ -1.3
NPHP3-207ENST00000476742 RTL5Q5HYW3 569 aaPredicted RBP6.96□□□□□ -1.3
NPHP3-207ENST00000476742 PRDM9Q9NQV7 894 aa6.96□□□□□ -1.3
NPHP3-207ENST00000476742 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
NPHP3-207ENST00000476742 COL25A1Q9BXS0 654 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-207ENST00000476742 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
NPHP3-207ENST00000476742 RFC5P40937 340 aa6.94□□□□□ -1.3
NPHP3-207ENST00000476742 TMEM259Q4ZIN3 620 aa6.94□□□□□ -1.3
NPHP3-207ENST00000476742 RC3H1Q5TC82 1133 aaKnown RBP6.94□□□□□ -1.3
NPHP3-207ENST00000476742 COBLO75128 1261 aa6.93□□□□□ -1.3
NPHP3-207ENST00000476742 SCARF1Q14162 830 aa6.93□□□□□ -1.3
NPHP3-207ENST00000476742 PTPRNQ16849 979 aa6.93□□□□□ -1.3
NPHP3-207ENST00000476742 CCDC24Q8N4L8 307 aa6.93□□□□□ -1.3
NPHP3-207ENST00000476742 NUDT12Q9BQG2 462 aa6.93□□□□□ -1.3
NPHP3-207ENST00000476742 AP1G2O75843 785 aa6.92□□□□□ -1.3
NPHP3-207ENST00000476742 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
NPHP3-207ENST00000476742 MRPL14Q6P1L8 145 aaKnown RBP6.92□□□□□ -1.3
NPHP3-207ENST00000476742 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
NPHP3-207ENST00000476742 RNFT1Q5M7Z0 435 aa6.9□□□□□ -1.3
NPHP3-207ENST00000476742 FBXO31Q5XUX0 539 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-207ENST00000476742 CTHP32929 405 aa6.89□□□□□ -1.31
NPHP3-207ENST00000476742 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
NPHP3-207ENST00000476742 BANK1Q8NDB2 785 aa6.89□□□□□ -1.31
NPHP3-207ENST00000476742 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
NPHP3-207ENST00000476742 EVA1BQ9NVM1 165 aa6.89□□□□□ -1.31
NPHP3-207ENST00000476742 USP17L8P0C7I0 530 aa6.88□□□□□ -1.31
NPHP3-207ENST00000476742 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
NPHP3-207ENST00000476742 APBB1O00213 710 aa6.87□□□□□ -1.31
NPHP3-207ENST00000476742 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-207ENST00000476742 MAN1A2O60476 641 aa6.87□□□□□ -1.31
NPHP3-207ENST00000476742 WNT7BP56706 349 aa6.87□□□□□ -1.31
NPHP3-207ENST00000476742 ZMYM1Q5SVZ6 1142 aa6.87□□□□□ -1.31
NPHP3-207ENST00000476742 WASF2Q9Y6W5 498 aa6.87□□□□□ -1.31
NPHP3-207ENST00000476742 SKOR1P84550 965 aa6.86□□□□□ -1.31
NPHP3-207ENST00000476742 SIAH2O43255 324 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 ITGB7P26010 798 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 PNMA1Q8ND90 353 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 ARMC2Q8NEN0 867 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 UNC93B1Q9H1C4 597 aa6.85□□□□□ -1.31
NPHP3-207ENST00000476742 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
NPHP3-207ENST00000476742 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
NPHP3-207ENST00000476742 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
NPHP3-207ENST00000476742 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
NPHP3-207ENST00000476742 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
NPHP3-207ENST00000476742 PRM3Q9NNZ6 103 aa6.84□□□□□ -1.31
NPHP3-207ENST00000476742 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
NPHP3-207ENST00000476742 MAP3K10Q02779 954 aa6.83□□□□□ -1.32
NPHP3-207ENST00000476742 BEND7Q8N7W2 519 aaPredicted RBP6.83□□□□□ -1.32
NPHP3-207ENST00000476742 SOCS7O14512 581 aa6.82□□□□□ -1.32
NPHP3-207ENST00000476742 FLIIQ13045 1269 aa6.82□□□□□ -1.32
NPHP3-207ENST00000476742 LYPD4Q6UWN0 246 aa6.82□□□□□ -1.32
NPHP3-207ENST00000476742 NR6A1Q15406 480 aa6.81□□□□□ -1.32
NPHP3-207ENST00000476742 NBPF14Q5TI25 921 aa6.81□□□□□ -1.32
NPHP3-207ENST00000476742 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
NPHP3-207ENST00000476742 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-207ENST00000476742 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
NPHP3-207ENST00000476742 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
NPHP3-207ENST00000476742 BAP1Q92560 729 aa6.8□□□□□ -1.32
NPHP3-207ENST00000476742 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
NPHP3-207ENST00000476742 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
NPHP3-207ENST00000476742 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
NPHP3-207ENST00000476742 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
NPHP3-207ENST00000476742 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
NPHP3-207ENST00000476742 AGERQ15109 404 aa6.79□□□□□ -1.32
NPHP3-207ENST00000476742 ZNF511Q8NB15 262 aa6.79□□□□□ -1.32
NPHP3-207ENST00000476742 MTMR14Q8NCE2 650 aa6.79□□□□□ -1.32
NPHP3-207ENST00000476742 MCM6Q14566 821 aa6.78□□□□□ -1.32
NPHP3-207ENST00000476742 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
NPHP3-207ENST00000476742 PODNQ7Z5L7 613 aa6.78□□□□□ -1.32
NPHP3-207ENST00000476742 NDUFB9Q9Y6M9 179 aa6.78□□□□□ -1.32
NPHP3-207ENST00000476742 CELA2BP08218 269 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-207ENST00000476742 YBX3P16989 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
NPHP3-207ENST00000476742 SH3BP2P78314 561 aa6.77□□□□□ -1.33
NPHP3-207ENST00000476742 BPHLQ86WA6 291 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-207ENST00000476742 EPS8L1Q8TE68 723 aa6.77□□□□□ -1.33
NPHP3-207ENST00000476742 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-207ENST00000476742 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
NPHP3-207ENST00000476742 GTF3C3Q9Y5Q9 886 aa6.77□□□□□ -1.33
NPHP3-207ENST00000476742 SCO2A0A1W2PP80 73 aa6.76□□□□□ -1.33
NPHP3-207ENST00000476742 KRBA1A5PL33 1030 aa6.76□□□□□ -1.33
NPHP3-207ENST00000476742 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
NPHP3-207ENST00000476742 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
NPHP3-207ENST00000476742 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
NPHP3-207ENST00000476742 RAD21O60216 631 aa6.75□□□□□ -1.33
NPHP3-207ENST00000476742 UBTFP17480 764 aaKnown RBP6.75□□□□□ -1.33
NPHP3-207ENST00000476742 PTK2Q05397 1052 aa6.75□□□□□ -1.33
NPHP3-207ENST00000476742 GPSM3Q9Y4H4 160 aa6.75□□□□□ -1.33
NPHP3-207ENST00000476742 VARSP26640 1264 aaKnown RBP6.74□□□□□ -1.33
NPHP3-207ENST00000476742 ZBTB33Q86T24 672 aa6.74□□□□□ -1.33
NPHP3-207ENST00000476742 WWC1Q8IX03 1113 aa6.74□□□□□ -1.33
NPHP3-207ENST00000476742 ARHGAP9Q9BRR9 750 aa6.74□□□□□ -1.33
NPHP3-207ENST00000476742 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
NPHP3-207ENST00000476742 MAGEB6P1A0A0J9YX57 407 aa6.73□□□□□ -1.33
NPHP3-207ENST00000476742 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
NPHP3-207ENST00000476742 FAM174AQ8TBP5 190 aa6.73□□□□□ -1.33
NPHP3-207ENST00000476742 FOXJ1Q92949 421 aa6.73□□□□□ -1.33
NPHP3-207ENST00000476742 TIMP2P16035 220 aa6.72□□□□□ -1.33
NPHP3-207ENST00000476742 ARTNQ5T4W7 220 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms