RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 COG3Q96JB2 828 aa22.49■■□□□ 1.19
SCN5A-212ENST00000476683 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
SCN5A-212ENST00000476683 ABCC6O95255 1503 aa22.46■■□□□ 1.19
SCN5A-212ENST00000476683 BARGINQ6ZT62 677 aa22.45■■□□□ 1.18
SCN5A-212ENST00000476683 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
SCN5A-212ENST00000476683 NSD3Q9BZ95 1437 aa22.45■■□□□ 1.18
SCN5A-212ENST00000476683 CRB1P82279 1406 aa22.44■■□□□ 1.18
SCN5A-212ENST00000476683 USP35Q9P2H5 1018 aa22.44■■□□□ 1.18
SCN5A-212ENST00000476683 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
SCN5A-212ENST00000476683 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
SCN5A-212ENST00000476683 THRAP3Q9Y2W1 955 aaKnown RBP22.43■■□□□ 1.18
SCN5A-212ENST00000476683 BRWD3Q6RI45 1802 aa22.43■■□□□ 1.18
SCN5A-212ENST00000476683 A0A0G2JS52 829 aa22.42■■□□□ 1.18
SCN5A-212ENST00000476683 MYT1Q01538 1121 aa22.42■■□□□ 1.18
SCN5A-212ENST00000476683 KRT27Q7Z3Y8 459 aa22.42■■□□□ 1.18
SCN5A-212ENST00000476683 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
SCN5A-212ENST00000476683 KIF7Q2M1P5 1343 aa22.4■■□□□ 1.18
SCN5A-212ENST00000476683 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
SCN5A-212ENST00000476683 PANK3Q9H999 370 aa22.4■■□□□ 1.18
SCN5A-212ENST00000476683 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
SCN5A-212ENST00000476683 MAP3K19Q56UN5 1328 aa22.39■■□□□ 1.18
SCN5A-212ENST00000476683 FBLN1P23142 703 aa22.39■■□□□ 1.17
SCN5A-212ENST00000476683 IP6K1Q92551 441 aa22.39■■□□□ 1.17
SCN5A-212ENST00000476683 LTN1O94822 1766 aa22.39■■□□□ 1.17
SCN5A-212ENST00000476683 CGNL1Q0VF96 1302 aa22.38■■□□□ 1.17
SCN5A-212ENST00000476683 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
SCN5A-212ENST00000476683 KIF20BQ96Q89 1820 aa22.38■■□□□ 1.17
SCN5A-212ENST00000476683 ERBB3P21860 1342 aa22.37■■□□□ 1.17
SCN5A-212ENST00000476683 CSB-PGBD3P0DP91 1061 aa22.37■■□□□ 1.17
SCN5A-212ENST00000476683 EP400Q96L91 3159 aa22.36■■□□□ 1.17
SCN5A-212ENST00000476683 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
SCN5A-212ENST00000476683 AMPHP49418 695 aa22.34■■□□□ 1.17
SCN5A-212ENST00000476683 CCDC125Q86Z20 511 aa22.34■■□□□ 1.17
SCN5A-212ENST00000476683 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
SCN5A-212ENST00000476683 HOXC9P31274 260 aa22.33■■□□□ 1.17
SCN5A-212ENST00000476683 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
SCN5A-212ENST00000476683 RTL1A6NKG5 1358 aa22.31■■□□□ 1.16
SCN5A-212ENST00000476683 CCDC7Q96M83 1385 aa22.31■■□□□ 1.16
SCN5A-212ENST00000476683 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
SCN5A-212ENST00000476683 PDE3BQ13370 1112 aa22.3■■□□□ 1.16
SCN5A-212ENST00000476683 FAM182BQ5T319 152 aa22.3■■□□□ 1.16
SCN5A-212ENST00000476683 NLRP2Q9NX02 1062 aa22.3■■□□□ 1.16
SCN5A-212ENST00000476683 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
SCN5A-212ENST00000476683 PARP4Q9UKK3 1724 aaKnown RBP22.29■■□□□ 1.16
SCN5A-212ENST00000476683 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
SCN5A-212ENST00000476683 DISP2A7MBM2 1401 aa22.29■■□□□ 1.16
SCN5A-212ENST00000476683 NSD2O96028 1365 aa22.27■■□□□ 1.16
SCN5A-212ENST00000476683 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
SCN5A-212ENST00000476683 DDB1Q16531 1140 aa22.26■■□□□ 1.15
SCN5A-212ENST00000476683 FAM196AQ6ZSG2 479 aa22.26■■□□□ 1.15
SCN5A-212ENST00000476683 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
SCN5A-212ENST00000476683 PER1O15534 1290 aaPredicted RBP22.25■■□□□ 1.15
SCN5A-212ENST00000476683 HSP90AB2PQ58FF8 381 aa22.25■■□□□ 1.15
SCN5A-212ENST00000476683 EMILIN1Q9Y6C2 1016 aa22.25■■□□□ 1.15
SCN5A-212ENST00000476683 INSRP06213 1382 aa22.25■■□□□ 1.15
SCN5A-212ENST00000476683 FLT4P35916 1363 aa22.25■■□□□ 1.15
SCN5A-212ENST00000476683 ANKRD26Q9UPS8 1709 aa22.24■■□□□ 1.15
SCN5A-212ENST00000476683 PEAK1Q9H792 1746 aa22.23■■□□□ 1.15
SCN5A-212ENST00000476683 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
SCN5A-212ENST00000476683 AMER1Q5JTC6 1135 aaPredicted RBP22.23■■□□□ 1.15
SCN5A-212ENST00000476683 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
SCN5A-212ENST00000476683 LRRC37A3O60309 1634 aa22.22■■□□□ 1.15
SCN5A-212ENST00000476683 FAM208AQ9UK61 1670 aaKnown RBP22.22■■□□□ 1.15
SCN5A-212ENST00000476683 EXOC5O00471 708 aa22.21■■□□□ 1.15
SCN5A-212ENST00000476683 IL2RBP14784 551 aa22.21■■□□□ 1.15
SCN5A-212ENST00000476683 TNNT2P45379 298 aaPredicted RBP22.2■■□□□ 1.14
SCN5A-212ENST00000476683 SF3B2Q13435 895 aaKnown RBP22.2■■□□□ 1.14
SCN5A-212ENST00000476683 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
SCN5A-212ENST00000476683 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
SCN5A-212ENST00000476683 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
SCN5A-212ENST00000476683 MARCH10Q8NA82 808 aaPredicted RBP22.19■■□□□ 1.14
SCN5A-212ENST00000476683 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
SCN5A-212ENST00000476683 MAP2P11137 1827 aaKnown RBP22.18■■□□□ 1.14
SCN5A-212ENST00000476683 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
SCN5A-212ENST00000476683 OVOS2A0A0G2JMS6 1433 aa22.17■■□□□ 1.14
SCN5A-212ENST00000476683 DEFB132Q7Z7B7 95 aa22.17■■□□□ 1.14
SCN5A-212ENST00000476683 TNS2Q63HR2 1409 aa22.16■■□□□ 1.14
SCN5A-212ENST00000476683 TRIM37O94972 964 aa22.16■■□□□ 1.14
SCN5A-212ENST00000476683 BCL9O00512 1426 aa22.15■■□□□ 1.14
SCN5A-212ENST00000476683 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
SCN5A-212ENST00000476683 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.14
SCN5A-212ENST00000476683 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
SCN5A-212ENST00000476683 BAG6P46379 1132 aa22.13■■□□□ 1.13
SCN5A-212ENST00000476683 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
SCN5A-212ENST00000476683 TNS1Q9HBL0 1735 aaKnown RBP22.11■■□□□ 1.13
SCN5A-212ENST00000476683 MEGF6O75095 1541 aa22.1■■□□□ 1.13
SCN5A-212ENST00000476683 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
SCN5A-212ENST00000476683 APBA3O96018 575 aa22.09■■□□□ 1.13
SCN5A-212ENST00000476683 EN1Q05925 392 aaPredicted RBP22.09■■□□□ 1.13
SCN5A-212ENST00000476683 EIF4A2Q14240 407 aaKnown RBP22.09■■□□□ 1.13
SCN5A-212ENST00000476683 CC2D1BQ5T0F9 858 aaKnown RBP22.09■■□□□ 1.13
SCN5A-212ENST00000476683 ZEB1P37275 1124 aaPredicted RBP22.08■■□□□ 1.13
SCN5A-212ENST00000476683 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
SCN5A-212ENST00000476683 RAPGEF4Q8WZA2 1011 aa22.08■■□□□ 1.13
SCN5A-212ENST00000476683 EYA1Q99502 592 aa22.08■■□□□ 1.13
SCN5A-212ENST00000476683 BCL11BQ9C0K0 894 aaPredicted RBP22.07■■□□□ 1.12
SCN5A-212ENST00000476683 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
SCN5A-212ENST00000476683 TATP17735 454 aaPredicted RBP22.06■■□□□ 1.12
SCN5A-212ENST00000476683 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
SCN5A-212ENST00000476683 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms