RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
CCM2-208ENST00000476594 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.13
CCM2-208ENST00000476594 EIF4G2P78344 907 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCM2-208ENST00000476594 ARHGEF25Q86VW2 580 aa14.21□□□□□ -0.13
CCM2-208ENST00000476594 USP54Q70EL1 1684 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 BRWD3Q6RI45 1802 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 LARP1Q6PKG0 1096 aaKnown RBP14.2□□□□□ -0.14
CCM2-208ENST00000476594 TOM1L2Q6ZVM7 507 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 NME9Q86XW9 330 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 COG3Q96JB2 828 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 EP400Q96L91 3159 aa14.2□□□□□ -0.14
CCM2-208ENST00000476594 WDR17Q8IZU2 1322 aa14.19□□□□□ -0.14
CCM2-208ENST00000476594 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
CCM2-208ENST00000476594 NFAT5O94916 1531 aa14.18□□□□□ -0.14
CCM2-208ENST00000476594 OVOS2A0A0J9YW53 1432 aa14.17□□□□□ -0.14
CCM2-208ENST00000476594 OVOS2Q6IE36 1432 aa14.17□□□□□ -0.14
CCM2-208ENST00000476594 BAG6P46379 1132 aa14.17□□□□□ -0.14
CCM2-208ENST00000476594 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
CCM2-208ENST00000476594 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
CCM2-208ENST00000476594 CARD10Q9BWT7 1032 aa14.15□□□□□ -0.14
CCM2-208ENST00000476594 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
CCM2-208ENST00000476594 COL18A1P39060 1754 aa14.14□□□□□ -0.15
CCM2-208ENST00000476594 DDB1Q16531 1140 aa14.14□□□□□ -0.15
CCM2-208ENST00000476594 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
CCM2-208ENST00000476594 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
CCM2-208ENST00000476594 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
CCM2-208ENST00000476594 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
CCM2-208ENST00000476594 LTN1O94822 1766 aa14.12□□□□□ -0.15
CCM2-208ENST00000476594 ERBB3P21860 1342 aa14.12□□□□□ -0.15
CCM2-208ENST00000476594 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
CCM2-208ENST00000476594 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
CCM2-208ENST00000476594 HSPA5P11021 654 aaKnown RBP14.11□□□□□ -0.15
CCM2-208ENST00000476594 AMPHP49418 695 aa14.11□□□□□ -0.15
CCM2-208ENST00000476594 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
CCM2-208ENST00000476594 ANKRD24Q8TF21 1146 aa14.1□□□□□ -0.15
CCM2-208ENST00000476594 IP6K1Q92551 441 aa14.1□□□□□ -0.15
CCM2-208ENST00000476594 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
CCM2-208ENST00000476594 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CCM2-208ENST00000476594 NSD3Q9BZ95 1437 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 EXOC5O00471 708 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 FYB1O15117 783 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
CCM2-208ENST00000476594 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.15
CCM2-208ENST00000476594 DISP2A7MBM2 1401 aa14.08□□□□□ -0.15
CCM2-208ENST00000476594 MYOM1P52179 1685 aa14.08□□□□□ -0.16
CCM2-208ENST00000476594 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
CCM2-208ENST00000476594 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
CCM2-208ENST00000476594 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
CCM2-208ENST00000476594 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
CCM2-208ENST00000476594 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
CCM2-208ENST00000476594 TRIM37O94972 964 aa14.07□□□□□ -0.16
CCM2-208ENST00000476594 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
CCM2-208ENST00000476594 LRRC37A3O60309 1634 aa14.07□□□□□ -0.16
CCM2-208ENST00000476594 APBA3O96018 575 aa14.06□□□□□ -0.16
CCM2-208ENST00000476594 IL2RBP14784 551 aa14.06□□□□□ -0.16
CCM2-208ENST00000476594 HOXC9P31274 260 aa14.06□□□□□ -0.16
CCM2-208ENST00000476594 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
CCM2-208ENST00000476594 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
CCM2-208ENST00000476594 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
CCM2-208ENST00000476594 FLT4P35916 1363 aa14.04□□□□□ -0.16
CCM2-208ENST00000476594 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
CCM2-208ENST00000476594 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
CCM2-208ENST00000476594 CARD14Q9BXL6 1004 aa14.03□□□□□ -0.16
CCM2-208ENST00000476594 NSD2O96028 1365 aa14.03□□□□□ -0.16
CCM2-208ENST00000476594 BCL9O00512 1426 aa14.03□□□□□ -0.16
CCM2-208ENST00000476594 INSRP06213 1382 aa14.01□□□□□ -0.17
CCM2-208ENST00000476594 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
CCM2-208ENST00000476594 NBPF14Q5TI25 921 aa14□□□□□ -0.17
CCM2-208ENST00000476594 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
CCM2-208ENST00000476594 PANK3Q9H999 370 aa14□□□□□ -0.17
CCM2-208ENST00000476594 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
CCM2-208ENST00000476594 PEAK1Q9H792 1746 aa13.99□□□□□ -0.17
CCM2-208ENST00000476594 EZH2Q15910 746 aaKnown RBP13.99□□□□□ -0.17
CCM2-208ENST00000476594 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
CCM2-208ENST00000476594 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
CCM2-208ENST00000476594 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
CCM2-208ENST00000476594 PLSCR1O15162 318 aa13.97□□□□□ -0.17
CCM2-208ENST00000476594 FBLN1P23142 703 aa13.97□□□□□ -0.17
CCM2-208ENST00000476594 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
CCM2-208ENST00000476594 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
CCM2-208ENST00000476594 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
CCM2-208ENST00000476594 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.17
CCM2-208ENST00000476594 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
CCM2-208ENST00000476594 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.17
CCM2-208ENST00000476594 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
CCM2-208ENST00000476594 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
CCM2-208ENST00000476594 SBF2Q86WG5 1849 aa13.95□□□□□ -0.18
CCM2-208ENST00000476594 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
CCM2-208ENST00000476594 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
CCM2-208ENST00000476594 NBPF6Q5VWK0 638 aa13.94□□□□□ -0.18
CCM2-208ENST00000476594 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
CCM2-208ENST00000476594 NBPF4Q96M43 638 aa13.94□□□□□ -0.18
CCM2-208ENST00000476594 RREB1Q92766 1687 aa13.94□□□□□ -0.18
CCM2-208ENST00000476594 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
CCM2-208ENST00000476594 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
CCM2-208ENST00000476594 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms