RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 COL18A1P39060 1754 aa17.75■□□□□ 0.43
PSMB4-204ENST00000476467 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
PSMB4-204ENST00000476467 HOXC9P31274 260 aa17.74■□□□□ 0.43
PSMB4-204ENST00000476467 ZBTB7CA1YPR0 619 aa17.73■□□□□ 0.43
PSMB4-204ENST00000476467 IP6K1Q92551 441 aa17.73■□□□□ 0.43
PSMB4-204ENST00000476467 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
PSMB4-204ENST00000476467 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
PSMB4-204ENST00000476467 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
PSMB4-204ENST00000476467 COL14A1Q05707 1796 aaKnown RBP17.72■□□□□ 0.43
PSMB4-204ENST00000476467 NUTM2BA6NNL0 878 aaPredicted RBP17.71■□□□□ 0.43
PSMB4-204ENST00000476467 NUTM2EB1AL46 878 aaPredicted RBP17.71■□□□□ 0.43
PSMB4-204ENST00000476467 NUTM2AQ8IVF1 878 aaPredicted RBP17.71■□□□□ 0.43
PSMB4-204ENST00000476467 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
PSMB4-204ENST00000476467 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
PSMB4-204ENST00000476467 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
PSMB4-204ENST00000476467 LRP6O75581 1613 aa17.69■□□□□ 0.42
PSMB4-204ENST00000476467 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
PSMB4-204ENST00000476467 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
PSMB4-204ENST00000476467 PLCH1Q4KWH8 1693 aa17.68■□□□□ 0.42
PSMB4-204ENST00000476467 CAMTA1Q9Y6Y1 1673 aa17.68■□□□□ 0.42
PSMB4-204ENST00000476467 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
PSMB4-204ENST00000476467 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
PSMB4-204ENST00000476467 IL13P35225 146 aa17.67■□□□□ 0.42
PSMB4-204ENST00000476467 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
PSMB4-204ENST00000476467 AXIN2Q9Y2T1 843 aa17.67■□□□□ 0.42
PSMB4-204ENST00000476467 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
PSMB4-204ENST00000476467 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
PSMB4-204ENST00000476467 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
PSMB4-204ENST00000476467 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
PSMB4-204ENST00000476467 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
PSMB4-204ENST00000476467 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.42
PSMB4-204ENST00000476467 ERBB3P21860 1342 aa17.64■□□□□ 0.41
PSMB4-204ENST00000476467 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
PSMB4-204ENST00000476467 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
PSMB4-204ENST00000476467 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
PSMB4-204ENST00000476467 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
PSMB4-204ENST00000476467 SLIT2O94813 1529 aa17.63■□□□□ 0.41
PSMB4-204ENST00000476467 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
PSMB4-204ENST00000476467 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
PSMB4-204ENST00000476467 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
PSMB4-204ENST00000476467 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
PSMB4-204ENST00000476467 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
PSMB4-204ENST00000476467 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
PSMB4-204ENST00000476467 WDR17Q8IZU2 1322 aa17.6■□□□□ 0.41
PSMB4-204ENST00000476467 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
PSMB4-204ENST00000476467 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.417e-7■■■■□ 21.2
PSMB4-204ENST00000476467 C8orf37Q96NL8 207 aa17.6■□□□□ 0.41
PSMB4-204ENST00000476467 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
PSMB4-204ENST00000476467 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
PSMB4-204ENST00000476467 EYA1Q99502 592 aa17.59■□□□□ 0.41
PSMB4-204ENST00000476467 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
PSMB4-204ENST00000476467 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
PSMB4-204ENST00000476467 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
PSMB4-204ENST00000476467 EVA1CP58658 441 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 KDRP35968 1356 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
PSMB4-204ENST00000476467 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 CRB1P82279 1406 aa17.57■□□□□ 0.4
PSMB4-204ENST00000476467 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
PSMB4-204ENST00000476467 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
PSMB4-204ENST00000476467 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
PSMB4-204ENST00000476467 FCHSD2O94868 740 aa17.55■□□□□ 0.4
PSMB4-204ENST00000476467 HMOX1P09601 288 aa17.55■□□□□ 0.4
PSMB4-204ENST00000476467 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
PSMB4-204ENST00000476467 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
PSMB4-204ENST00000476467 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
PSMB4-204ENST00000476467 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
PSMB4-204ENST00000476467 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
PSMB4-204ENST00000476467 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
PSMB4-204ENST00000476467 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
PSMB4-204ENST00000476467 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
PSMB4-204ENST00000476467 AFF2P51816 1311 aa17.53■□□□□ 0.4
PSMB4-204ENST00000476467 USP21Q9UK80 565 aa17.52■□□□□ 0.39
PSMB4-204ENST00000476467 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
PSMB4-204ENST00000476467 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
PSMB4-204ENST00000476467 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
PSMB4-204ENST00000476467 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
PSMB4-204ENST00000476467 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
PSMB4-204ENST00000476467 WNK3Q9BYP7 1800 aa17.5■□□□□ 0.39
PSMB4-204ENST00000476467 VPS72Q15906 364 aa17.49■□□□□ 0.39
PSMB4-204ENST00000476467 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
PSMB4-204ENST00000476467 PARP4Q9UKK3 1724 aaKnown RBP17.49■□□□□ 0.39
PSMB4-204ENST00000476467 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
PSMB4-204ENST00000476467 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
PSMB4-204ENST00000476467 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
PSMB4-204ENST00000476467 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
PSMB4-204ENST00000476467 MEGF6O75095 1541 aa17.48■□□□□ 0.39
PSMB4-204ENST00000476467 NEFMP07197 916 aa17.48■□□□□ 0.39
PSMB4-204ENST00000476467 ATRNO75882 1429 aa17.48■□□□□ 0.39
PSMB4-204ENST00000476467 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
PSMB4-204ENST00000476467 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
PSMB4-204ENST00000476467 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
PSMB4-204ENST00000476467 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
PSMB4-204ENST00000476467 THRAP3Q9Y2W1 955 aaKnown RBP17.46■□□□□ 0.39
PSMB4-204ENST00000476467 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
PSMB4-204ENST00000476467 DISP2A7MBM2 1401 aa17.46■□□□□ 0.39
PSMB4-204ENST00000476467 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
PSMB4-204ENST00000476467 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms