RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
TMEM254-211ENST00000476173 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
TMEM254-211ENST00000476173 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
TMEM254-211ENST00000476173 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
TMEM254-211ENST00000476173 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
TMEM254-211ENST00000476173 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
TMEM254-211ENST00000476173 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
TMEM254-211ENST00000476173 CPDO75976 1380 aa13.26□□□□□ -0.29
TMEM254-211ENST00000476173 MAP2P11137 1827 aaKnown RBP13.26□□□□□ -0.29
TMEM254-211ENST00000476173 PPP2R1AP30153 589 aa13.26□□□□□ -0.29
TMEM254-211ENST00000476173 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
TMEM254-211ENST00000476173 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
TMEM254-211ENST00000476173 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
TMEM254-211ENST00000476173 MAP3K19Q56UN5 1328 aa13.25□□□□□ -0.29
TMEM254-211ENST00000476173 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
TMEM254-211ENST00000476173 LRP6O75581 1613 aa13.24□□□□□ -0.29
TMEM254-211ENST00000476173 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
TMEM254-211ENST00000476173 MTHFSP49914 203 aa13.24□□□□□ -0.29
TMEM254-211ENST00000476173 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
TMEM254-211ENST00000476173 LTN1O94822 1766 aa13.24□□□□□ -0.29
TMEM254-211ENST00000476173 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
TMEM254-211ENST00000476173 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
TMEM254-211ENST00000476173 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
TMEM254-211ENST00000476173 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
TMEM254-211ENST00000476173 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
TMEM254-211ENST00000476173 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 ZBTB7CA1YPR0 619 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 HOXC9P31274 260 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 AMPHP49418 695 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 IP6K1Q92551 441 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 COL18A1P39060 1754 aa13.22□□□□□ -0.29
TMEM254-211ENST00000476173 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
TMEM254-211ENST00000476173 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
TMEM254-211ENST00000476173 FLT4P35916 1363 aa13.2□□□□□ -0.3
TMEM254-211ENST00000476173 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
TMEM254-211ENST00000476173 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
TMEM254-211ENST00000476173 INSRP06213 1382 aa13.2□□□□□ -0.3
TMEM254-211ENST00000476173 ABCC6O95255 1503 aa13.19□□□□□ -0.3
TMEM254-211ENST00000476173 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
TMEM254-211ENST00000476173 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
TMEM254-211ENST00000476173 MIER1Q8N108 512 aa13.19□□□□□ -0.3
TMEM254-211ENST00000476173 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
TMEM254-211ENST00000476173 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
TMEM254-211ENST00000476173 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
TMEM254-211ENST00000476173 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
TMEM254-211ENST00000476173 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
TMEM254-211ENST00000476173 BLMP54132 1417 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-211ENST00000476173 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
TMEM254-211ENST00000476173 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-211ENST00000476173 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
TMEM254-211ENST00000476173 SLIT2O94813 1529 aa13.17□□□□□ -0.3
TMEM254-211ENST00000476173 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-211ENST00000476173 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
TMEM254-211ENST00000476173 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-211ENST00000476173 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.3
TMEM254-211ENST00000476173 IL13P35225 146 aa13.15□□□□□ -0.3
TMEM254-211ENST00000476173 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
TMEM254-211ENST00000476173 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
TMEM254-211ENST00000476173 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-211ENST00000476173 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
TMEM254-211ENST00000476173 ERBB3P21860 1342 aa13.14□□□□□ -0.31
TMEM254-211ENST00000476173 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
TMEM254-211ENST00000476173 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
TMEM254-211ENST00000476173 EVA1CP58658 441 aa13.14□□□□□ -0.31
TMEM254-211ENST00000476173 AFF2P51816 1311 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
TMEM254-211ENST00000476173 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 STRN4Q9NRL3 753 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 USP21Q9UK80 565 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
TMEM254-211ENST00000476173 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
TMEM254-211ENST00000476173 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
TMEM254-211ENST00000476173 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
TMEM254-211ENST00000476173 EYA1Q99502 592 aa13.11□□□□□ -0.31
TMEM254-211ENST00000476173 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
TMEM254-211ENST00000476173 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
TMEM254-211ENST00000476173 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
TMEM254-211ENST00000476173 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
TMEM254-211ENST00000476173 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
TMEM254-211ENST00000476173 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
TMEM254-211ENST00000476173 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
TMEM254-211ENST00000476173 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
TMEM254-211ENST00000476173 CRB1P82279 1406 aa13.09□□□□□ -0.31
TMEM254-211ENST00000476173 VPS72Q15906 364 aa13.09□□□□□ -0.31
TMEM254-211ENST00000476173 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
TMEM254-211ENST00000476173 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
TMEM254-211ENST00000476173 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.09□□□□□ -0.31
TMEM254-211ENST00000476173 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
TMEM254-211ENST00000476173 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
TMEM254-211ENST00000476173 SPATA31A1Q5TZJ5 1347 aa13.08□□□□□ -0.32
TMEM254-211ENST00000476173 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
TMEM254-211ENST00000476173 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
TMEM254-211ENST00000476173 ATRNO75882 1429 aa13.07□□□□□ -0.32
TMEM254-211ENST00000476173 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
TMEM254-211ENST00000476173 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-211ENST00000476173 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms