RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
NR1H3-219ENST00000476086 DIAPH1O60610 1272 aaKnown RBP25.4■■□□□ 1.66
NR1H3-219ENST00000476086 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
NR1H3-219ENST00000476086 WDR43Q15061 677 aaKnown RBP eCLIP25.39■■□□□ 1.66
NR1H3-219ENST00000476086 PRDM11Q9NQV5 511 aa25.39■■□□□ 1.66
NR1H3-219ENST00000476086 COL18A1P39060 1754 aa25.38■■□□□ 1.65
NR1H3-219ENST00000476086 COL14A1Q05707 1796 aaKnown RBP25.37■■□□□ 1.65
NR1H3-219ENST00000476086 RGPD5Q99666 1765 aa25.37■■□□□ 1.65
NR1H3-219ENST00000476086 PNISRQ8TF01 805 aaKnown RBP25.37■■□□□ 1.65
NR1H3-219ENST00000476086 HSP90AB2PQ58FF8 381 aa25.36■■□□□ 1.65
NR1H3-219ENST00000476086 NUTM2BA6NNL0 878 aaPredicted RBP25.34■■□□□ 1.65
NR1H3-219ENST00000476086 NUTM2EB1AL46 878 aaPredicted RBP25.34■■□□□ 1.65
NR1H3-219ENST00000476086 NUTM2AQ8IVF1 878 aaPredicted RBP25.34■■□□□ 1.65
NR1H3-219ENST00000476086 LMO7Q8WWI1 1683 aa25.33■■□□□ 1.65
NR1H3-219ENST00000476086 FAM208AQ9UK61 1670 aaKnown RBP25.33■■□□□ 1.65
NR1H3-219ENST00000476086 EIF4A2Q14240 407 aaKnown RBP25.32■■□□□ 1.64
NR1H3-219ENST00000476086 CHRNA2Q15822 529 aa25.32■■□□□ 1.64
NR1H3-219ENST00000476086 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
NR1H3-219ENST00000476086 IL13P35225 146 aa25.31■■□□□ 1.64
NR1H3-219ENST00000476086 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
NR1H3-219ENST00000476086 FAM83GA6ND36 823 aa25.29■■□□□ 1.64
NR1H3-219ENST00000476086 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
NR1H3-219ENST00000476086 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
NR1H3-219ENST00000476086 U2AF1Q01081 240 aaKnown RBP eCLIP25.28■■□□□ 1.64
NR1H3-219ENST00000476086 ANKRD24Q8TF21 1146 aa25.28■■□□□ 1.64
NR1H3-219ENST00000476086 PNNQ9H307 717 aaKnown RBP25.28■■□□□ 1.64
NR1H3-219ENST00000476086 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
NR1H3-219ENST00000476086 PLCH1Q4KWH8 1693 aa25.28■■□□□ 1.64
NR1H3-219ENST00000476086 RGPD1P0DJD0 1748 aa25.28■■□□□ 1.64
NR1H3-219ENST00000476086 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
NR1H3-219ENST00000476086 LTV1Q96GA3 475 aaPredicted RBP25.27■■□□□ 1.64
NR1H3-219ENST00000476086 ERBB3P21860 1342 aa25.27■■□□□ 1.64
NR1H3-219ENST00000476086 CAMTA1Q9Y6Y1 1673 aa25.26■■□□□ 1.63
NR1H3-219ENST00000476086 ADAMTS8Q9UP79 889 aa25.25■■□□□ 1.63
NR1H3-219ENST00000476086 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
NR1H3-219ENST00000476086 RGPD2P0DJD1 1756 aa25.23■■□□□ 1.63
NR1H3-219ENST00000476086 COL5A2P05997 1499 aaPredicted RBP25.23■■□□□ 1.63
NR1H3-219ENST00000476086 EVA1CP58658 441 aa25.23■■□□□ 1.63
NR1H3-219ENST00000476086 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
NR1H3-219ENST00000476086 FCHSD2O94868 740 aa25.22■■□□□ 1.63
NR1H3-219ENST00000476086 MEX3CQ5U5Q3 659 aaKnown RBP25.22■■□□□ 1.63
NR1H3-219ENST00000476086 BTG4Q9NY30 223 aa25.22■■□□□ 1.63
NR1H3-219ENST00000476086 NEFMP07197 916 aa25.21■■□□□ 1.63
NR1H3-219ENST00000476086 EYA1Q99502 592 aa25.21■■□□□ 1.63
NR1H3-219ENST00000476086 LRP6O75581 1613 aa25.21■■□□□ 1.63
NR1H3-219ENST00000476086 WDR17Q8IZU2 1322 aa25.2■■□□□ 1.62
NR1H3-219ENST00000476086 NGLY1Q96IV0 654 aa25.19■■□□□ 1.62
NR1H3-219ENST00000476086 NRAPQ86VF7 1730 aa25.18■■□□□ 1.62
NR1H3-219ENST00000476086 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
NR1H3-219ENST00000476086 C8orf37Q96NL8 207 aa25.18■■□□□ 1.62
NR1H3-219ENST00000476086 NLRP2Q9NX02 1062 aa25.18■■□□□ 1.62
NR1H3-219ENST00000476086 SLIT2O94813 1529 aa25.17■■□□□ 1.62
NR1H3-219ENST00000476086 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
NR1H3-219ENST00000476086 KDRP35968 1356 aa25.17■■□□□ 1.62
NR1H3-219ENST00000476086 HMOX1P09601 288 aa25.16■■□□□ 1.62
NR1H3-219ENST00000476086 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
NR1H3-219ENST00000476086 TOM1L2Q6ZVM7 507 aa25.16■■□□□ 1.62
NR1H3-219ENST00000476086 RUNDC1Q96C34 613 aa25.16■■□□□ 1.62
NR1H3-219ENST00000476086 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
NR1H3-219ENST00000476086 NCAPD2Q15021 1401 aa25.15■■□□□ 1.62
NR1H3-219ENST00000476086 RSPH6AQ9H0K4 717 aa25.15■■□□□ 1.62
NR1H3-219ENST00000476086 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.15■■□□□ 1.62
NR1H3-219ENST00000476086 MAPK8IP3Q9UPT6 1336 aa25.14■■□□□ 1.62
NR1H3-219ENST00000476086 CRB1P82279 1406 aa25.14■■□□□ 1.62
NR1H3-219ENST00000476086 FNBP4Q8N3X1 1017 aaPredicted RBP25.13■■□□□ 1.61
NR1H3-219ENST00000476086 CARD10Q9BWT7 1032 aa25.13■■□□□ 1.61
NR1H3-219ENST00000476086 PRKAR2BP31323 418 aa25.12■■□□□ 1.61
NR1H3-219ENST00000476086 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
NR1H3-219ENST00000476086 UNC5CLQ8IV45 518 aa25.11■■□□□ 1.61
NR1H3-219ENST00000476086 PLEKHG2Q9H7P9 1386 aa25.1■■□□□ 1.61
NR1H3-219ENST00000476086 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
NR1H3-219ENST00000476086 CCDC146Q8IYE0 955 aa25.1■■□□□ 1.61
NR1H3-219ENST00000476086 USHBP1Q8N6Y0 703 aa25.1■■□□□ 1.61
NR1H3-219ENST00000476086 PLEKHF1Q96S99 279 aa25.1■■□□□ 1.61
NR1H3-219ENST00000476086 NGEFQ8N5V2 710 aa25.09■■□□□ 1.61
NR1H3-219ENST00000476086 RAPGEF4Q8WZA2 1011 aa25.08■■□□□ 1.61
NR1H3-219ENST00000476086 PARP4Q9UKK3 1724 aaKnown RBP25.07■■□□□ 1.6
NR1H3-219ENST00000476086 USP21Q9UK80 565 aa25.07■■□□□ 1.6
NR1H3-219ENST00000476086 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
NR1H3-219ENST00000476086 HNRNPUQ00839 825 aaKnown RBP eCLIP25.06■■□□□ 1.6
NR1H3-219ENST00000476086 AFF2P51816 1311 aa25.06■■□□□ 1.6
NR1H3-219ENST00000476086 TATP17735 454 aaPredicted RBP25.05■■□□□ 1.6
NR1H3-219ENST00000476086 TCP11L2Q8N4U5 519 aa25.05■■□□□ 1.6
NR1H3-219ENST00000476086 THRAP3Q9Y2W1 955 aaKnown RBP25.05■■□□□ 1.6
NR1H3-219ENST00000476086 APAF1O14727 1248 aa25.04■■□□□ 1.6
NR1H3-219ENST00000476086 VPS72Q15906 364 aa25.04■■□□□ 1.6
NR1H3-219ENST00000476086 YTHDC1Q96MU7 727 aaKnown RBP25.04■■□□□ 1.6
NR1H3-219ENST00000476086 CCDC9Q9Y3X0 531 aaKnown RBP25.04■■□□□ 1.6
NR1H3-219ENST00000476086 AMOTQ4VCS5 1084 aa25.03■■□□□ 1.6
NR1H3-219ENST00000476086 WNK3Q9BYP7 1800 aa25.02■■□□□ 1.6
NR1H3-219ENST00000476086 NCBP3Q53F19 620 aaKnown RBP25.02■■□□□ 1.6
NR1H3-219ENST00000476086 SPATA31A1Q5TZJ5 1347 aa25.02■■□□□ 1.6
NR1H3-219ENST00000476086 IL2RBP14784 551 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 PLEKHO1Q53GL0 409 aaPredicted RBP25.01■■□□□ 1.59
NR1H3-219ENST00000476086 GAS2L2Q8NHY3 880 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 PHACTR3Q96KR7 559 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 SPATA31A5Q5VU36 1347 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 SPATA31A7Q8IWB4 1347 aa25.01■■□□□ 1.59
NR1H3-219ENST00000476086 DLG5Q8TDM6 1919 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms