RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 C1QTNF8P60827 252 aa29.65■■■□□ 2.34
HDAC11-217ENST00000475818 TXNRD1Q16881 649 aa29.65■■■□□ 2.34
HDAC11-217ENST00000475818 STAC3Q96MF2 364 aa29.65■■■□□ 2.34
HDAC11-217ENST00000475818 AATKQ6ZMQ8 1374 aa29.64■■■□□ 2.34
HDAC11-217ENST00000475818 SRPK2P78362 688 aaKnown RBP29.64■■■□□ 2.34
HDAC11-217ENST00000475818 RAB3GAP2Q9H2M9 1393 aa29.64■■■□□ 2.33
HDAC11-217ENST00000475818 NLRP6P59044 892 aa29.63■■■□□ 2.33
HDAC11-217ENST00000475818 SLC15A2Q16348 729 aa29.63■■■□□ 2.33
HDAC11-217ENST00000475818 UTRNP46939 3433 aa29.63■■■□□ 2.33
HDAC11-217ENST00000475818 MTFR1LQ9H019 292 aa29.61■■■□□ 2.33
HDAC11-217ENST00000475818 CABP2Q9NPB3 220 aa29.6■■■□□ 2.33
HDAC11-217ENST00000475818 AXIN2Q9Y2T1 843 aa29.59■■■□□ 2.33
HDAC11-217ENST00000475818 WDR17Q8IZU2 1322 aa29.59■■■□□ 2.33
HDAC11-217ENST00000475818 SLIT3O75094 1523 aa29.57■■■□□ 2.32
HDAC11-217ENST00000475818 BCL9O00512 1426 aa29.57■■■□□ 2.32
HDAC11-217ENST00000475818 SGIP1Q9BQI5 828 aa29.57■■■□□ 2.32
HDAC11-217ENST00000475818 CDCA7Q9BWT1 371 aaPredicted RBP29.56■■■□□ 2.32
HDAC11-217ENST00000475818 WNK3Q9BYP7 1800 aa29.55■■■□□ 2.32
HDAC11-217ENST00000475818 BRD4O60885 1362 aaPredicted RBP29.54■■■□□ 2.32
HDAC11-217ENST00000475818 ARXQ96QS3 562 aa29.54■■■□□ 2.32
HDAC11-217ENST00000475818 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
HDAC11-217ENST00000475818 USP6P35125 1406 aa29.54■■■□□ 2.32
HDAC11-217ENST00000475818 CSB-PGBD3P0DP91 1061 aa29.53■■■□□ 2.32
HDAC11-217ENST00000475818 COL18A1P39060 1754 aa29.52■■■□□ 2.32
HDAC11-217ENST00000475818 CABP1Q9NZU7 370 aa29.52■■■□□ 2.32
HDAC11-217ENST00000475818 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
HDAC11-217ENST00000475818 CHD4Q14839 1912 aa29.5■■■□□ 2.31
HDAC11-217ENST00000475818 EXOC5O00471 708 aa29.5■■■□□ 2.31
HDAC11-217ENST00000475818 SOX12O15370 315 aa29.5■■■□□ 2.31
HDAC11-217ENST00000475818 CPSF1Q10570 1443 aaKnown RBP29.5■■■□□ 2.31
HDAC11-217ENST00000475818 IFFO2Q5TF58 517 aa29.49■■■□□ 2.31
HDAC11-217ENST00000475818 CARD10Q9BWT7 1032 aa29.49■■■□□ 2.31
HDAC11-217ENST00000475818 GPR162Q16538 588 aa29.48■■■□□ 2.31
HDAC11-217ENST00000475818 CENPJQ9HC77 1338 aaPredicted RBP29.47■■■□□ 2.31
HDAC11-217ENST00000475818 ACSBG1Q96GR2 724 aa29.47■■■□□ 2.31
HDAC11-217ENST00000475818 ARHGEF25Q86VW2 580 aa29.46■■■□□ 2.31
HDAC11-217ENST00000475818 PIK3C2AO00443 1686 aa29.46■■■□□ 2.31
HDAC11-217ENST00000475818 GIGYF1O75420 1035 aaPredicted RBP29.44■■■□□ 2.3
HDAC11-217ENST00000475818 KLHL34Q8N239 644 aa29.44■■■□□ 2.3
HDAC11-217ENST00000475818 MAP3K5Q99683 1374 aa29.43■■■□□ 2.3
HDAC11-217ENST00000475818 TNS2Q63HR2 1409 aa29.42■■■□□ 2.3
HDAC11-217ENST00000475818 ZNF827Q17R98 1081 aa29.41■■■□□ 2.3
HDAC11-217ENST00000475818 PELP1Q8IZL8 1130 aaKnown RBP29.41■■■□□ 2.3
HDAC11-217ENST00000475818 KIAA1210Q9ULL0 1709 aa29.41■■■□□ 2.3
HDAC11-217ENST00000475818 RGPD5Q99666 1765 aa29.39■■■□□ 2.3
HDAC11-217ENST00000475818 KCNH5Q8NCM2 988 aa29.39■■■□□ 2.3
HDAC11-217ENST00000475818 NHSQ6T4R5 1651 aa29.39■■■□□ 2.3
HDAC11-217ENST00000475818 CCDC7Q96M83 1385 aa29.39■■■□□ 2.29
HDAC11-217ENST00000475818 PAPPAQ13219 1627 aa29.38■■■□□ 2.29
HDAC11-217ENST00000475818 TTC21BQ7Z4L5 1316 aa29.37■■■□□ 2.29
HDAC11-217ENST00000475818 QRICH2Q9H0J4 1663 aa29.37■■■□□ 2.29
HDAC11-217ENST00000475818 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
HDAC11-217ENST00000475818 LRRC4BQ9NT99 713 aa29.33■■■□□ 2.29
HDAC11-217ENST00000475818 NFAT5O94916 1531 aa29.3■■■□□ 2.28
HDAC11-217ENST00000475818 ABCC6O95255 1503 aa29.3■■■□□ 2.28
HDAC11-217ENST00000475818 NLRP2Q9NX02 1062 aa29.3■■■□□ 2.28
HDAC11-217ENST00000475818 POLD1P28340 1107 aa29.29■■■□□ 2.28
HDAC11-217ENST00000475818 NLGN2Q8NFZ4 835 aa29.28■■■□□ 2.28
HDAC11-217ENST00000475818 BTAF1O14981 1849 aa29.27■■■□□ 2.28
HDAC11-217ENST00000475818 EVC2Q86UK5 1308 aa29.27■■■□□ 2.28
HDAC11-217ENST00000475818 AKT1S1Q96B36 256 aa29.27■■■□□ 2.28
HDAC11-217ENST00000475818 TTC21AQ8NDW8 1320 aa29.26■■■□□ 2.27
HDAC11-217ENST00000475818 ZNF692Q9BU19 519 aaPredicted RBP29.26■■■□□ 2.27
HDAC11-217ENST00000475818 SHANK3Q9BYB0 1731 aa29.25■■■□□ 2.27
HDAC11-217ENST00000475818 IL2RBP14784 551 aa29.25■■■□□ 2.27
HDAC11-217ENST00000475818 SLC16A10Q8TF71 515 aa29.24■■■□□ 2.27
HDAC11-217ENST00000475818 PNPLA7Q6ZV29 1317 aa29.23■■■□□ 2.27
HDAC11-217ENST00000475818 ERBB3P21860 1342 aa29.22■■■□□ 2.27
HDAC11-217ENST00000475818 KCNQ4P56696 695 aa29.2■■■□□ 2.26
HDAC11-217ENST00000475818 TFCP2L1Q9NZI6 479 aa29.2■■■□□ 2.26
HDAC11-217ENST00000475818 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.26
HDAC11-217ENST00000475818 YBX3P16989 372 aaKnown RBP eCLIP29.19■■■□□ 2.26
HDAC11-217ENST00000475818 SLC27A3Q5K4L6 730 aa29.18■■■□□ 2.26
HDAC11-217ENST00000475818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.17■■■□□ 2.26
HDAC11-217ENST00000475818 ANKRD24Q8TF21 1146 aa29.17■■■□□ 2.26
HDAC11-217ENST00000475818 DDX54Q8TDD1 881 aaKnown RBP29.15■■■□□ 2.26
HDAC11-217ENST00000475818 KAT6BQ8WYB5 2073 aa29.14■■■□□ 2.26
HDAC11-217ENST00000475818 GRIN3BO60391 1043 aa29.14■■■□□ 2.26
HDAC11-217ENST00000475818 CEP350Q5VT06 3117 aa29.14■■■□□ 2.25
HDAC11-217ENST00000475818 QSER1Q2KHR3 1735 aa29.13■■■□□ 2.25
HDAC11-217ENST00000475818 GOLGB1Q14789 3259 aaKnown RBP29.13■■■□□ 2.25
HDAC11-217ENST00000475818 ATP10DQ9P241 1426 aa29.12■■■□□ 2.25
HDAC11-217ENST00000475818 COL24A1Q17RW2 1714 aa29.12■■■□□ 2.25
HDAC11-217ENST00000475818 NME9Q86XW9 330 aa29.12■■■□□ 2.25
HDAC11-217ENST00000475818 SYTL4Q96C24 671 aaPredicted RBP29.12■■■□□ 2.25
HDAC11-217ENST00000475818 MSH5O43196 834 aa29.1■■■□□ 2.25
HDAC11-217ENST00000475818 TUBGCP6Q96RT7 1819 aa29.1■■■□□ 2.25
HDAC11-217ENST00000475818 USP31Q70CQ4 1352 aa29.09■■■□□ 2.25
HDAC11-217ENST00000475818 PRIM1P49642 420 aaKnown RBP29.07■■■□□ 2.24
HDAC11-217ENST00000475818 MSL1Q68DK7 614 aa29.06■■■□□ 2.24
HDAC11-217ENST00000475818 LTN1O94822 1766 aa29.06■■■□□ 2.24
HDAC11-217ENST00000475818 GPBP1L1Q9HC44 474 aaPredicted RBP29.05■■■□□ 2.24
HDAC11-217ENST00000475818 MON2Q7Z3U7 1717 aa29.04■■■□□ 2.24
HDAC11-217ENST00000475818 ZNF526Q8TF50 670 aaPredicted RBP29.04■■■□□ 2.24
HDAC11-217ENST00000475818 LTV1Q96GA3 475 aaPredicted RBP29.04■■■□□ 2.24
HDAC11-217ENST00000475818 COL23A1Q86Y22 540 aaPredicted RBP29.03■■■□□ 2.24
HDAC11-217ENST00000475818 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
HDAC11-217ENST00000475818 CCNL1Q9UK58 526 aaPredicted RBP29.02■■■□□ 2.24
HDAC11-217ENST00000475818 ANKRD36BQ8N2N9 1353 aa29.01■■■□□ 2.24
HDAC11-217ENST00000475818 HSPA6P17066 643 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms