RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 ABCC6O95255 1503 aa23.1■■□□□ 1.29
VPS8-222ENST00000475580 KRT27Q7Z3Y8 459 aa23.1■■□□□ 1.29
VPS8-222ENST00000475580 LTN1O94822 1766 aa23.09■■□□□ 1.29
VPS8-222ENST00000475580 CRB1P82279 1406 aa23.09■■□□□ 1.29
VPS8-222ENST00000475580 A0A0G2JS52 829 aa23.09■■□□□ 1.29
VPS8-222ENST00000475580 MYT1Q01538 1121 aa23.09■■□□□ 1.29
VPS8-222ENST00000475580 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
VPS8-222ENST00000475580 BARGINQ6ZT62 677 aa23.08■■□□□ 1.29
VPS8-222ENST00000475580 EP400Q96L91 3159 aa23.07■■□□□ 1.28
VPS8-222ENST00000475580 TCP11L2Q8N4U5 519 aa23.07■■□□□ 1.28
VPS8-222ENST00000475580 WDR17Q8IZU2 1322 aa23.06■■□□□ 1.28
VPS8-222ENST00000475580 CARD14Q9BXL6 1004 aa23.05■■□□□ 1.28
VPS8-222ENST00000475580 KIF20BQ96Q89 1820 aa23.04■■□□□ 1.28
VPS8-222ENST00000475580 FYB1O15117 783 aa23.04■■□□□ 1.28
VPS8-222ENST00000475580 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
VPS8-222ENST00000475580 COG3Q96JB2 828 aa23.03■■□□□ 1.28
VPS8-222ENST00000475580 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
VPS8-222ENST00000475580 PARP4Q9UKK3 1724 aaKnown RBP23.02■■□□□ 1.28
VPS8-222ENST00000475580 BLMP54132 1417 aaPredicted RBP23.01■■□□□ 1.27
VPS8-222ENST00000475580 NSD3Q9BZ95 1437 aa23.01■■□□□ 1.27
VPS8-222ENST00000475580 C11orf95C9JLR9 678 aaPredicted RBP23.01■■□□□ 1.27
VPS8-222ENST00000475580 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
VPS8-222ENST00000475580 FBLN1P23142 703 aa23■■□□□ 1.27
VPS8-222ENST00000475580 FAM182BQ5T319 152 aa23■■□□□ 1.27
VPS8-222ENST00000475580 CCDC125Q86Z20 511 aa23■■□□□ 1.27
VPS8-222ENST00000475580 GGNBP2Q9H3C7 697 aa23■■□□□ 1.27
VPS8-222ENST00000475580 ERBB3P21860 1342 aa22.99■■□□□ 1.27
VPS8-222ENST00000475580 LRRC37A3O60309 1634 aa22.98■■□□□ 1.27
VPS8-222ENST00000475580 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
VPS8-222ENST00000475580 CARD10Q9BWT7 1032 aa22.98■■□□□ 1.27
VPS8-222ENST00000475580 MAP3K19Q56UN5 1328 aa22.97■■□□□ 1.27
VPS8-222ENST00000475580 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
VPS8-222ENST00000475580 DISP2A7MBM2 1401 aa22.96■■□□□ 1.27
VPS8-222ENST00000475580 IP6K1Q92551 441 aa22.95■■□□□ 1.26
VPS8-222ENST00000475580 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
VPS8-222ENST00000475580 RGPD1P0DJD0 1748 aa22.93■■□□□ 1.26
VPS8-222ENST00000475580 CCDC7Q96M83 1385 aa22.92■■□□□ 1.26
VPS8-222ENST00000475580 PEAK1Q9H792 1746 aa22.92■■□□□ 1.26
VPS8-222ENST00000475580 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
VPS8-222ENST00000475580 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
VPS8-222ENST00000475580 HOXC9P31274 260 aa22.91■■□□□ 1.26
VPS8-222ENST00000475580 RRS1Q15050 365 aaKnown RBP22.91■■□□□ 1.26
VPS8-222ENST00000475580 DEFB132Q7Z7B7 95 aa22.91■■□□□ 1.26
VPS8-222ENST00000475580 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
VPS8-222ENST00000475580 FAM196AQ6ZSG2 479 aa22.9■■□□□ 1.26
VPS8-222ENST00000475580 FAM208AQ9UK61 1670 aaKnown RBP22.9■■□□□ 1.26
VPS8-222ENST00000475580 CDCA7Q9BWT1 371 aaPredicted RBP22.89■■□□□ 1.25
VPS8-222ENST00000475580 PANK3Q9H999 370 aa22.89■■□□□ 1.25
VPS8-222ENST00000475580 NLRP2Q9NX02 1062 aa22.89■■□□□ 1.25
VPS8-222ENST00000475580 ANKRD26Q9UPS8 1709 aa22.88■■□□□ 1.25
VPS8-222ENST00000475580 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
VPS8-222ENST00000475580 KIF7Q2M1P5 1343 aa22.88■■□□□ 1.25
VPS8-222ENST00000475580 AMPHP49418 695 aa22.88■■□□□ 1.25
VPS8-222ENST00000475580 DDB1Q16531 1140 aa22.88■■□□□ 1.25
VPS8-222ENST00000475580 SF3B2Q13435 895 aaKnown RBP22.87■■□□□ 1.25
VPS8-222ENST00000475580 RGPD2P0DJD1 1756 aa22.86■■□□□ 1.25
VPS8-222ENST00000475580 LTV1Q96GA3 475 aaPredicted RBP22.85■■□□□ 1.25
VPS8-222ENST00000475580 OVOS2A0A0G2JMS6 1433 aa22.84■■□□□ 1.25
VPS8-222ENST00000475580 TRIM37O94972 964 aa22.84■■□□□ 1.25
VPS8-222ENST00000475580 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
VPS8-222ENST00000475580 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
VPS8-222ENST00000475580 SBF2Q86WG5 1849 aa22.83■■□□□ 1.25
VPS8-222ENST00000475580 KIF24Q5T7B8 1368 aa22.83■■□□□ 1.25
VPS8-222ENST00000475580 FLT4P35916 1363 aa22.82■■□□□ 1.24
VPS8-222ENST00000475580 EMILIN1Q9Y6C2 1016 aa22.82■■□□□ 1.24
VPS8-222ENST00000475580 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
VPS8-222ENST00000475580 INSRP06213 1382 aa22.81■■□□□ 1.24
VPS8-222ENST00000475580 IL2RBP14784 551 aa22.81■■□□□ 1.24
VPS8-222ENST00000475580 BAG6P46379 1132 aa22.81■■□□□ 1.24
VPS8-222ENST00000475580 EXOC5O00471 708 aa22.8■■□□□ 1.24
VPS8-222ENST00000475580 HSP90AB2PQ58FF8 381 aa22.8■■□□□ 1.24
VPS8-222ENST00000475580 BCL9O00512 1426 aa22.8■■□□□ 1.24
VPS8-222ENST00000475580 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
VPS8-222ENST00000475580 NSD2O96028 1365 aa22.77■■□□□ 1.24
VPS8-222ENST00000475580 NBPF6Q5VWK0 638 aa22.77■■□□□ 1.24
VPS8-222ENST00000475580 NBPF4Q96M43 638 aa22.77■■□□□ 1.24
VPS8-222ENST00000475580 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
VPS8-222ENST00000475580 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
VPS8-222ENST00000475580 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
VPS8-222ENST00000475580 APBA3O96018 575 aa22.75■■□□□ 1.23
VPS8-222ENST00000475580 CAMKK2Q96RR4 588 aa22.75■■□□□ 1.23
VPS8-222ENST00000475580 MEGF6O75095 1541 aa22.75■■□□□ 1.23
VPS8-222ENST00000475580 EZH2Q15910 746 aaKnown RBP22.74■■□□□ 1.23
VPS8-222ENST00000475580 PTF1AQ7RTS3 328 aa22.74■■□□□ 1.23
VPS8-222ENST00000475580 SHANK3Q9BYB0 1731 aa22.74■■□□□ 1.23
VPS8-222ENST00000475580 TNNT2P45379 298 aaPredicted RBP22.73■■□□□ 1.23
VPS8-222ENST00000475580 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
VPS8-222ENST00000475580 USHBP1Q8N6Y0 703 aa22.73■■□□□ 1.23
VPS8-222ENST00000475580 KNSTRNQ9Y448 316 aa22.73■■□□□ 1.23
VPS8-222ENST00000475580 RREB1Q92766 1687 aa22.73■■□□□ 1.23
VPS8-222ENST00000475580 PPM1GO15355 546 aaPredicted RBP22.71■■□□□ 1.23
VPS8-222ENST00000475580 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
VPS8-222ENST00000475580 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
VPS8-222ENST00000475580 BCL11BQ9C0K0 894 aaPredicted RBP22.7■■□□□ 1.22
VPS8-222ENST00000475580 PARD3Q8TEW0 1356 aa22.7■■□□□ 1.22
VPS8-222ENST00000475580 NHSQ6T4R5 1651 aa22.7■■□□□ 1.22
VPS8-222ENST00000475580 RGPD3A6NKT7 1758 aaPredicted RBP22.69■■□□□ 1.22
VPS8-222ENST00000475580 RGPD4Q7Z3J3 1758 aa22.69■■□□□ 1.22
VPS8-222ENST00000475580 MORC1Q86VD1 984 aa22.68■■□□□ 1.22
VPS8-222ENST00000475580 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms