RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
FXR1-211ENST00000475315 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
FXR1-211ENST00000475315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■□□□□ 10.9
FXR1-211ENST00000475315 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
FXR1-211ENST00000475315 ABCC11Q96J66 1382 aa14.36□□□□□ -0.11
FXR1-211ENST00000475315 USP32Q8NFA0 1604 aa14.35□□□□□ -0.11
FXR1-211ENST00000475315 ZNF771Q7L3S4 317 aaPredicted RBP14.35□□□□□ -0.11
FXR1-211ENST00000475315 MPNDQ8N594 471 aa14.35□□□□□ -0.11
FXR1-211ENST00000475315 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
FXR1-211ENST00000475315 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
FXR1-211ENST00000475315 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
FXR1-211ENST00000475315 TAF7LQ5H9L4 462 aa14.35□□□□□ -0.11
FXR1-211ENST00000475315 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
FXR1-211ENST00000475315 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
FXR1-211ENST00000475315 PLEKHD1A6NEE1 506 aa14.33□□□□□ -0.11
FXR1-211ENST00000475315 SLC20A2Q08357 652 aa14.33□□□□□ -0.11
FXR1-211ENST00000475315 RSPH4AQ5TD94 716 aa14.33□□□□□ -0.11
FXR1-211ENST00000475315 MORC1Q86VD1 984 aa14.33□□□□□ -0.11
FXR1-211ENST00000475315 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.11
FXR1-211ENST00000475315 CD109Q6YHK3 1445 aa14.33□□□□□ -0.12
FXR1-211ENST00000475315 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
FXR1-211ENST00000475315 KIAA1524Q8TCG1 905 aa14.33□□□□□ -0.12
FXR1-211ENST00000475315 NSD3Q9BZ95 1437 aa14.33□□□□□ -0.12
FXR1-211ENST00000475315 ATP10BO94823 1461 aa14.33□□□□□ -0.12
FXR1-211ENST00000475315 USP25Q9UHP3 1055 aa14.32□□□□□ -0.12
FXR1-211ENST00000475315 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
FXR1-211ENST00000475315 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
FXR1-211ENST00000475315 TRPM2O94759 1503 aa14.32□□□□□ -0.12
FXR1-211ENST00000475315 ADCY5O95622 1261 aa14.32□□□□□ -0.12
FXR1-211ENST00000475315 ANKRD36BQ8N2N9 1353 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
FXR1-211ENST00000475315 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
FXR1-211ENST00000475315 BRD1O95696 1058 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 SYAP1Q96A49 352 aaPredicted RBP14.31□□□□□ -0.12
FXR1-211ENST00000475315 PTPRTO14522 1441 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 MTHFSP49914 203 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 NCBP1Q09161 790 aaKnown RBP14.31□□□□□ -0.12
FXR1-211ENST00000475315 SYCP1Q15431 976 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 SIRT2Q8IXJ6 389 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
FXR1-211ENST00000475315 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 ST18O60284 1047 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 KCNF1Q9H3M0 494 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
FXR1-211ENST00000475315 IL16Q14005 1332 aa14.3□□□□□ -0.12
FXR1-211ENST00000475315 INO80Q9ULG1 1556 aaPredicted RBP14.29□□□□□ -0.12
FXR1-211ENST00000475315 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 TCHHQ07283 1943 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 PLEKHM2Q8IWE5 1019 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 PHF14O94880 888 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 KCNJ4P48050 445 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 PYCARDQ9ULZ3 195 aa14.29□□□□□ -0.12
FXR1-211ENST00000475315 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
FXR1-211ENST00000475315 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
FXR1-211ENST00000475315 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
FXR1-211ENST00000475315 CFAP53Q96M91 514 aa14.28□□□□□ -0.12
FXR1-211ENST00000475315 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.12
FXR1-211ENST00000475315 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.12
FXR1-211ENST00000475315 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.12
FXR1-211ENST00000475315 TTC22Q5TAA0 569 aa14.27□□□□□ -0.12
FXR1-211ENST00000475315 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.12
FXR1-211ENST00000475315 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
FXR1-211ENST00000475315 TERF2Q15554 542 aa14.27□□□□□ -0.13
FXR1-211ENST00000475315 FOXD4L5Q5VV16 416 aaPredicted RBP14.27□□□□□ -0.13
FXR1-211ENST00000475315 FOXD4L4Q8WXT5 416 aaPredicted RBP14.27□□□□□ -0.13
FXR1-211ENST00000475315 KNDC1Q76NI1 1749 aa14.27□□□□□ -0.13
FXR1-211ENST00000475315 TULP2O00295 520 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 GADD45BO75293 160 aaPredicted RBP14.26□□□□□ -0.13
FXR1-211ENST00000475315 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
FXR1-211ENST00000475315 MYOM2P54296 1465 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 KDM4AO75164 1064 aa14.26□□□□□ -0.13
FXR1-211ENST00000475315 U2AF1L5P0DN76 240 aaPredicted RBP14.26□□□□□ -0.13
FXR1-211ENST00000475315 U2AF1Q01081 240 aaKnown RBP eCLIP14.26□□□□□ -0.13
FXR1-211ENST00000475315 INTS3Q68E01 1043 aaKnown RBP14.25□□□□□ -0.13
FXR1-211ENST00000475315 PTCH1Q13635 1447 aa14.25□□□□□ -0.13
FXR1-211ENST00000475315 CUL4AQ13619 759 aa14.25□□□□□ -0.13
FXR1-211ENST00000475315 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
FXR1-211ENST00000475315 NEURL4Q96JN8 1562 aa14.25□□□□□ -0.13
FXR1-211ENST00000475315 AP5Z1O43299 807 aa14.24□□□□□ -0.13
FXR1-211ENST00000475315 TMX3Q96JJ7 454 aa14.24□□□□□ -0.13
FXR1-211ENST00000475315 TIGD1Q96MW7 591 aa14.24□□□□□ -0.13
FXR1-211ENST00000475315 FAM53CQ9NYF3 392 aa14.24□□□□□ -0.13
FXR1-211ENST00000475315 SMARCA5O60264 1052 aaPredicted RBP14.23□□□□□ -0.13
FXR1-211ENST00000475315 TPM3P06753 285 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
FXR1-211ENST00000475315 CAPN2P17655 700 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 KIF18AQ8NI77 898 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 CCDC183Q5T5S1 534 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 FUCA2Q9BTY2 467 aa14.23□□□□□ -0.13
FXR1-211ENST00000475315 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
FXR1-211ENST00000475315 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms