RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
SSR1-205ENST00000475213 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
SSR1-205ENST00000475213 COL5A2P05997 1499 aaPredicted RBP17.28■□□□□ 0.36
SSR1-205ENST00000475213 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
SSR1-205ENST00000475213 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
SSR1-205ENST00000475213 RGPD5Q99666 1765 aa17.26■□□□□ 0.35
SSR1-205ENST00000475213 BARGINQ6ZT62 677 aa17.26■□□□□ 0.35
SSR1-205ENST00000475213 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
SSR1-205ENST00000475213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
SSR1-205ENST00000475213 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
SSR1-205ENST00000475213 SF3B2Q13435 895 aaKnown RBP17.25■□□□□ 0.35
SSR1-205ENST00000475213 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 USP54Q70EL1 1684 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 USP47Q96K76 1375 aa17.25■□□□□ 0.35
SSR1-205ENST00000475213 SOX12O15370 315 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 NFAT5O94916 1531 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
SSR1-205ENST00000475213 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
SSR1-205ENST00000475213 NME9Q86XW9 330 aa17.23■□□□□ 0.35
SSR1-205ENST00000475213 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
SSR1-205ENST00000475213 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
SSR1-205ENST00000475213 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
SSR1-205ENST00000475213 CRB1P82279 1406 aa17.22■□□□□ 0.35
SSR1-205ENST00000475213 RGPD1P0DJD0 1748 aa17.22■□□□□ 0.35
SSR1-205ENST00000475213 ABCB7O75027 752 aa17.22■□□□□ 0.35
SSR1-205ENST00000475213 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
SSR1-205ENST00000475213 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
SSR1-205ENST00000475213 LTN1O94822 1766 aa17.2■□□□□ 0.34
SSR1-205ENST00000475213 TMF1P82094 1093 aa17.19■□□□□ 0.34
SSR1-205ENST00000475213 TOM1L2Q6ZVM7 507 aa17.19■□□□□ 0.34
SSR1-205ENST00000475213 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
SSR1-205ENST00000475213 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
SSR1-205ENST00000475213 ABCC6O95255 1503 aa17.18■□□□□ 0.34
SSR1-205ENST00000475213 BAG6P46379 1132 aa17.18■□□□□ 0.34
SSR1-205ENST00000475213 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
SSR1-205ENST00000475213 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
SSR1-205ENST00000475213 WNK3Q9BYP7 1800 aa17.18■□□□□ 0.34
SSR1-205ENST00000475213 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
SSR1-205ENST00000475213 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
SSR1-205ENST00000475213 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
SSR1-205ENST00000475213 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
SSR1-205ENST00000475213 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
SSR1-205ENST00000475213 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
SSR1-205ENST00000475213 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
SSR1-205ENST00000475213 TRIM37O94972 964 aa17.14■□□□□ 0.33
SSR1-205ENST00000475213 EN1Q05925 392 aaPredicted RBP17.14■□□□□ 0.33
SSR1-205ENST00000475213 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
SSR1-205ENST00000475213 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
SSR1-205ENST00000475213 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
SSR1-205ENST00000475213 PEAK1Q9H792 1746 aa17.11■□□□□ 0.33
SSR1-205ENST00000475213 DDB1Q16531 1140 aa17.11■□□□□ 0.33
SSR1-205ENST00000475213 COG3Q96JB2 828 aa17.11■□□□□ 0.33
SSR1-205ENST00000475213 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
SSR1-205ENST00000475213 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
SSR1-205ENST00000475213 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
SSR1-205ENST00000475213 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SSR1-205ENST00000475213 MYOM1P52179 1685 aa17.1■□□□□ 0.33
SSR1-205ENST00000475213 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
SSR1-205ENST00000475213 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
SSR1-205ENST00000475213 APBA3O96018 575 aa17.08■□□□□ 0.32
SSR1-205ENST00000475213 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
SSR1-205ENST00000475213 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
SSR1-205ENST00000475213 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
SSR1-205ENST00000475213 C11orf95C9JLR9 678 aaPredicted RBP17.07■□□□□ 0.32
SSR1-205ENST00000475213 FYB1O15117 783 aa17.07■□□□□ 0.32
SSR1-205ENST00000475213 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
SSR1-205ENST00000475213 IP6K1Q92551 441 aa17.07■□□□□ 0.32
SSR1-205ENST00000475213 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
SSR1-205ENST00000475213 FBLN1P23142 703 aa17.06■□□□□ 0.32
SSR1-205ENST00000475213 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
SSR1-205ENST00000475213 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
SSR1-205ENST00000475213 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
SSR1-205ENST00000475213 RREB1Q92766 1687 aa17.04■□□□□ 0.32
SSR1-205ENST00000475213 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
SSR1-205ENST00000475213 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
SSR1-205ENST00000475213 EXOC5O00471 708 aa17.04■□□□□ 0.32
SSR1-205ENST00000475213 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
SSR1-205ENST00000475213 HOXC9P31274 260 aa17.03■□□□□ 0.32
SSR1-205ENST00000475213 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
SSR1-205ENST00000475213 BCL9O00512 1426 aa17.03■□□□□ 0.32
SSR1-205ENST00000475213 TNS2Q63HR2 1409 aa17.03■□□□□ 0.32
SSR1-205ENST00000475213 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
SSR1-205ENST00000475213 NUP188Q5SRE5 1749 aa17.02■□□□□ 0.32
SSR1-205ENST00000475213 HSPA5P11021 654 aaKnown RBP17.02■□□□□ 0.32
SSR1-205ENST00000475213 AMPHP49418 695 aa17.02■□□□□ 0.32
SSR1-205ENST00000475213 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSR1-205ENST00000475213 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
SSR1-205ENST00000475213 IL2RBP14784 551 aa17.01■□□□□ 0.31
SSR1-205ENST00000475213 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
SSR1-205ENST00000475213 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
SSR1-205ENST00000475213 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
SSR1-205ENST00000475213 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
SSR1-205ENST00000475213 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms