RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-213ENST00000475211 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
ERGIC3-213ENST00000475211 BCL9LQ86UU0 1499 aa18.67■□□□□ 0.58
ERGIC3-213ENST00000475211 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
ERGIC3-213ENST00000475211 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 FBLN1P23142 703 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 RALBP1Q15311 655 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 ZNF772Q68DY9 489 aaPredicted RBP18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 IP6K1Q92551 441 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 USP21Q9UK80 565 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 EMILIN1Q9Y6C2 1016 aa18.66■□□□□ 0.58
ERGIC3-213ENST00000475211 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
ERGIC3-213ENST00000475211 HOXC9P31274 260 aa18.65■□□□□ 0.58
ERGIC3-213ENST00000475211 PEAK1Q9H792 1746 aa18.64■□□□□ 0.57
ERGIC3-213ENST00000475211 INSRP06213 1382 aa18.64■□□□□ 0.57
ERGIC3-213ENST00000475211 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
ERGIC3-213ENST00000475211 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
ERGIC3-213ENST00000475211 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
ERGIC3-213ENST00000475211 ERBB3P21860 1342 aa18.62■□□□□ 0.57
ERGIC3-213ENST00000475211 ATRNO75882 1429 aa18.62■□□□□ 0.57
ERGIC3-213ENST00000475211 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
ERGIC3-213ENST00000475211 EVA1CP58658 441 aa18.61■□□□□ 0.57
ERGIC3-213ENST00000475211 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
ERGIC3-213ENST00000475211 FAM208AQ9UK61 1670 aaKnown RBP18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 MTHFSP49914 203 aa18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 VPS72Q15906 364 aa18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
ERGIC3-213ENST00000475211 CRB1P82279 1406 aa18.59■□□□□ 0.57
ERGIC3-213ENST00000475211 HSP90AB2PQ58FF8 381 aa18.59■□□□□ 0.57
ERGIC3-213ENST00000475211 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
ERGIC3-213ENST00000475211 RGPD5Q99666 1765 aa18.59■□□□□ 0.57
ERGIC3-213ENST00000475211 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
ERGIC3-213ENST00000475211 CSB-PGBD3P0DP91 1061 aa18.58■□□□□ 0.56
ERGIC3-213ENST00000475211 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.56
ERGIC3-213ENST00000475211 ANP32CO43423 234 aa18.57■□□□□ 0.56
ERGIC3-213ENST00000475211 LARP1Q6PKG0 1096 aaKnown RBP18.56■□□□□ 0.56
ERGIC3-213ENST00000475211 CFAP53Q96M91 514 aa18.56■□□□□ 0.56
ERGIC3-213ENST00000475211 QTRT2Q9H974 415 aaKnown RBP18.56■□□□□ 0.56
ERGIC3-213ENST00000475211 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
ERGIC3-213ENST00000475211 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
ERGIC3-213ENST00000475211 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
ERGIC3-213ENST00000475211 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
ERGIC3-213ENST00000475211 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
ERGIC3-213ENST00000475211 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
ERGIC3-213ENST00000475211 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-213ENST00000475211 GJD4Q96KN9 370 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-213ENST00000475211 GLI3P10071 1580 aa18.53■□□□□ 0.56
ERGIC3-213ENST00000475211 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
ERGIC3-213ENST00000475211 EIF4A2Q14240 407 aaKnown RBP18.53■□□□□ 0.56
ERGIC3-213ENST00000475211 CARD10Q9BWT7 1032 aa18.53■□□□□ 0.56
ERGIC3-213ENST00000475211 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
ERGIC3-213ENST00000475211 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.56
ERGIC3-213ENST00000475211 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
ERGIC3-213ENST00000475211 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
ERGIC3-213ENST00000475211 NCAPD2Q15021 1401 aa18.5■□□□□ 0.55
ERGIC3-213ENST00000475211 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
ERGIC3-213ENST00000475211 RXRBP28702 533 aa18.5■□□□□ 0.55
ERGIC3-213ENST00000475211 IL13P35225 146 aa18.49■□□□□ 0.55
ERGIC3-213ENST00000475211 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
ERGIC3-213ENST00000475211 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
ERGIC3-213ENST00000475211 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
ERGIC3-213ENST00000475211 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
ERGIC3-213ENST00000475211 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
ERGIC3-213ENST00000475211 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
ERGIC3-213ENST00000475211 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
ERGIC3-213ENST00000475211 EYA1Q99502 592 aa18.47■□□□□ 0.55
ERGIC3-213ENST00000475211 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
ERGIC3-213ENST00000475211 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
ERGIC3-213ENST00000475211 WNK3Q9BYP7 1800 aa18.46■□□□□ 0.55
ERGIC3-213ENST00000475211 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
ERGIC3-213ENST00000475211 ONECUT3O60422 494 aaPredicted RBP18.46■□□□□ 0.55
ERGIC3-213ENST00000475211 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
ERGIC3-213ENST00000475211 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
ERGIC3-213ENST00000475211 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
ERGIC3-213ENST00000475211 FAM98CQ17RN3 349 aaKnown RBP18.45■□□□□ 0.54
ERGIC3-213ENST00000475211 IL2RBP14784 551 aa18.44■□□□□ 0.54
ERGIC3-213ENST00000475211 KDRP35968 1356 aa18.43■□□□□ 0.54
ERGIC3-213ENST00000475211 RGS12O14924 1447 aa18.43■□□□□ 0.54
ERGIC3-213ENST00000475211 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
ERGIC3-213ENST00000475211 PARP4Q9UKK3 1724 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-213ENST00000475211 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
ERGIC3-213ENST00000475211 MEGF6O75095 1541 aa18.41■□□□□ 0.54
ERGIC3-213ENST00000475211 A0A0G2JS52 829 aa18.41■□□□□ 0.54
ERGIC3-213ENST00000475211 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-213ENST00000475211 MYT1Q01538 1121 aa18.41■□□□□ 0.54
ERGIC3-213ENST00000475211 OVOS2A0A0G2JMS6 1433 aa18.4■□□□□ 0.54
ERGIC3-213ENST00000475211 SEPT12Q8IYM1 358 aa18.4■□□□□ 0.54
ERGIC3-213ENST00000475211 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
ERGIC3-213ENST00000475211 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
ERGIC3-213ENST00000475211 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.53
ERGIC3-213ENST00000475211 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
ERGIC3-213ENST00000475211 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-213ENST00000475211 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
ERGIC3-213ENST00000475211 DDB1Q16531 1140 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms