RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 WDR17Q8IZU2 1322 aa35.64■■■■□ 3.3
TMEM54-205ENST00000475208 WNK3Q9BYP7 1800 aa35.63■■■■□ 3.29
TMEM54-205ENST00000475208 DDB1Q16531 1140 aa35.63■■■■□ 3.29
TMEM54-205ENST00000475208 KCNH5Q8NCM2 988 aa35.63■■■■□ 3.29
TMEM54-205ENST00000475208 TTC21AQ8NDW8 1320 aa35.62■■■■□ 3.29
TMEM54-205ENST00000475208 ARHGEF25Q86VW2 580 aa35.62■■■■□ 3.29
TMEM54-205ENST00000475208 SOX12O15370 315 aa35.61■■■■□ 3.29
TMEM54-205ENST00000475208 KTN1Q86UP2 1357 aaKnown RBP35.58■■■■□ 3.29
TMEM54-205ENST00000475208 NFAT5O94916 1531 aa35.57■■■■□ 3.29
TMEM54-205ENST00000475208 SBF2Q86WG5 1849 aa35.57■■■■□ 3.29
TMEM54-205ENST00000475208 RGPD5Q99666 1765 aa35.56■■■■□ 3.28
TMEM54-205ENST00000475208 RGPD3A6NKT7 1758 aaPredicted RBP35.56■■■■□ 3.28
TMEM54-205ENST00000475208 RGPD4Q7Z3J3 1758 aa35.56■■■■□ 3.28
TMEM54-205ENST00000475208 CSB-PGBD3P0DP91 1061 aa35.54■■■■□ 3.28
TMEM54-205ENST00000475208 CDCA7Q9BWT1 371 aaPredicted RBP35.54■■■■□ 3.28
TMEM54-205ENST00000475208 MON2Q7Z3U7 1717 aa35.54■■■■□ 3.28
TMEM54-205ENST00000475208 SBNO2Q9Y2G9 1366 aa35.52■■■■□ 3.28
TMEM54-205ENST00000475208 CARD10Q9BWT7 1032 aa35.52■■■■□ 3.28
TMEM54-205ENST00000475208 MARCH10Q8NA82 808 aaPredicted RBP35.51■■■■□ 3.28
TMEM54-205ENST00000475208 PLSCR1O15162 318 aa35.5■■■■□ 3.27
TMEM54-205ENST00000475208 ABCC6O95255 1503 aa35.49■■■■□ 3.27
TMEM54-205ENST00000475208 PTF1AQ7RTS3 328 aa35.49■■■■□ 3.27
TMEM54-205ENST00000475208 BCL11BQ9C0K0 894 aaPredicted RBP35.49■■■■□ 3.27
TMEM54-205ENST00000475208 BCL9O00512 1426 aa35.48■■■■□ 3.27
TMEM54-205ENST00000475208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.46■■■■□ 3.27
TMEM54-205ENST00000475208 CARD11Q9BXL7 1154 aa35.46■■■■□ 3.27
TMEM54-205ENST00000475208 CD163L1Q9NR16 1453 aa35.44■■■■□ 3.26
TMEM54-205ENST00000475208 USP31Q70CQ4 1352 aa35.44■■■■□ 3.26
TMEM54-205ENST00000475208 CCDC7Q96M83 1385 aa35.44■■■■□ 3.26
TMEM54-205ENST00000475208 SPON1Q9HCB6 807 aa35.44■■■■□ 3.26
TMEM54-205ENST00000475208 USP54Q70EL1 1684 aa35.43■■■■□ 3.26
TMEM54-205ENST00000475208 ANO8Q9HCE9 1232 aaPredicted RBP35.42■■■■□ 3.26
TMEM54-205ENST00000475208 KCNQ2O43526 872 aa35.41■■■■□ 3.26
TMEM54-205ENST00000475208 EXOC5O00471 708 aa35.4■■■■□ 3.26
TMEM54-205ENST00000475208 NME9Q86XW9 330 aa35.4■■■■□ 3.26
TMEM54-205ENST00000475208 TMC1Q8TDI8 760 aa35.4■■■■□ 3.26
TMEM54-205ENST00000475208 PPP1R1BQ9UD71 204 aaPredicted RBP35.4■■■■□ 3.26
TMEM54-205ENST00000475208 TNS2Q63HR2 1409 aa35.4■■■■□ 3.26
TMEM54-205ENST00000475208 HDGFL2Q7Z4V5 671 aaPredicted RBP35.36■■■■□ 3.25
TMEM54-205ENST00000475208 PROM2Q8N271 834 aa35.36■■■■□ 3.25
TMEM54-205ENST00000475208 ERBB3P21860 1342 aa35.35■■■■□ 3.25
TMEM54-205ENST00000475208 SLC12A5Q9H2X9 1139 aa35.35■■■■□ 3.25
TMEM54-205ENST00000475208 CASZ1Q86V15 1759 aa35.35■■■■□ 3.25
TMEM54-205ENST00000475208 LTN1O94822 1766 aa35.34■■■■□ 3.25
TMEM54-205ENST00000475208 TONSLQ96HA7 1378 aa35.34■■■■□ 3.25
TMEM54-205ENST00000475208 EDC4Q6P2E9 1401 aaKnown RBP35.33■■■■□ 3.25
TMEM54-205ENST00000475208 NLRP2Q9NX02 1062 aa35.32■■■■□ 3.24
TMEM54-205ENST00000475208 NINLQ9Y2I6 1382 aa35.3■■■■□ 3.24
TMEM54-205ENST00000475208 TXNRD1Q16881 649 aa35.3■■■■□ 3.24
TMEM54-205ENST00000475208 A0A1W2PP64 1363 aa35.29■■■■□ 3.24
TMEM54-205ENST00000475208 NHSQ6T4R5 1651 aa35.28■■■■□ 3.24
TMEM54-205ENST00000475208 PDGFDQ9GZP0 370 aaPredicted RBP35.28■■■■□ 3.24
TMEM54-205ENST00000475208 TERF2IPQ9NYB0 399 aa35.28■■■■□ 3.24
TMEM54-205ENST00000475208 ANKRD24Q8TF21 1146 aa35.26■■■■□ 3.24
TMEM54-205ENST00000475208 IL2RBP14784 551 aa35.25■■■■□ 3.23
TMEM54-205ENST00000475208 STK32BQ9NY57 414 aa35.25■■■■□ 3.23
TMEM54-205ENST00000475208 PUS7Q96PZ0 661 aaKnown RBP35.24■■■■□ 3.23
TMEM54-205ENST00000475208 ACSBG1Q96GR2 724 aa35.23■■■■□ 3.23
TMEM54-205ENST00000475208 ZBTB7AO95365 584 aa35.22■■■■□ 3.23
TMEM54-205ENST00000475208 SLC15A2Q16348 729 aa35.2■■■■□ 3.23
TMEM54-205ENST00000475208 YY1P25490 414 aa35.19■■■■□ 3.22
TMEM54-205ENST00000475208 DCAF8L1A6NGE4 600 aa35.17■■■■□ 3.22
TMEM54-205ENST00000475208 TESK2Q96S53 571 aa35.16■■■■□ 3.22
TMEM54-205ENST00000475208 MYOM1P52179 1685 aa35.16■■■■□ 3.22
TMEM54-205ENST00000475208 PTGER2P43116 358 aa35.14■■■■□ 3.22
TMEM54-205ENST00000475208 IP6K1Q92551 441 aa35.14■■■■□ 3.22
TMEM54-205ENST00000475208 ATF5Q9Y2D1 282 aaPredicted RBP35.14■■■■□ 3.22
TMEM54-205ENST00000475208 BTAF1O14981 1849 aa35.13■■■■□ 3.21
TMEM54-205ENST00000475208 ST20-MTHFSA0A0A6YYL1 179 aa35.13■■■■□ 3.21
TMEM54-205ENST00000475208 FAM208AQ9UK61 1670 aaKnown RBP35.12■■■■□ 3.21
TMEM54-205ENST00000475208 PAPPAQ13219 1627 aa35.11■■■■□ 3.21
TMEM54-205ENST00000475208 LTV1Q96GA3 475 aaPredicted RBP35.11■■■■□ 3.21
TMEM54-205ENST00000475208 COG3Q96JB2 828 aa35.08■■■■□ 3.21
TMEM54-205ENST00000475208 MTFR1LQ9H019 292 aa35.08■■■■□ 3.21
TMEM54-205ENST00000475208 MAP3K19Q56UN5 1328 aa35.06■■■■□ 3.2
TMEM54-205ENST00000475208 KAT6BQ8WYB5 2073 aa35.04■■■■□ 3.2
TMEM54-205ENST00000475208 SLC24A1O60721 1099 aa35.04■■■■□ 3.2
TMEM54-205ENST00000475208 DDX54Q8TDD1 881 aaKnown RBP35.04■■■■□ 3.2
TMEM54-205ENST00000475208 HOXC9P31274 260 aa35.03■■■■□ 3.2
TMEM54-205ENST00000475208 ANKRD36BQ8N2N9 1353 aa35.02■■■■□ 3.2
TMEM54-205ENST00000475208 AMPHP49418 695 aa35.01■■■■□ 3.2
TMEM54-205ENST00000475208 FBLN1P23142 703 aa35■■■■□ 3.19
TMEM54-205ENST00000475208 ZNF827Q17R98 1081 aa35■■■■□ 3.19
TMEM54-205ENST00000475208 SGIP1Q9BQI5 828 aa35■■■■□ 3.19
TMEM54-205ENST00000475208 FHDC1Q9C0D6 1143 aaPredicted RBP35■■■■□ 3.19
TMEM54-205ENST00000475208 LRRC4BQ9NT99 713 aa35■■■■□ 3.19
TMEM54-205ENST00000475208 SYT17Q9BSW7 474 aa34.96■■■■□ 3.19
TMEM54-205ENST00000475208 RGPD2P0DJD1 1756 aa34.95■■■■□ 3.19
TMEM54-205ENST00000475208 RTL1A6NKG5 1358 aa34.95■■■■□ 3.19
TMEM54-205ENST00000475208 MEGF6O75095 1541 aa34.94■■■■□ 3.18
TMEM54-205ENST00000475208 DOT1LQ8TEK3 1739 aa34.94■■■■□ 3.18
TMEM54-205ENST00000475208 SLC27A3Q5K4L6 730 aa34.93■■■■□ 3.18
TMEM54-205ENST00000475208 SHANK3Q9BYB0 1731 aa34.92■■■■□ 3.18
TMEM54-205ENST00000475208 USP47Q96K76 1375 aa34.92■■■■□ 3.18
TMEM54-205ENST00000475208 TMF1P82094 1093 aa34.92■■■■□ 3.18
TMEM54-205ENST00000475208 SYTL4Q96C24 671 aaPredicted RBP34.92■■■■□ 3.18
TMEM54-205ENST00000475208 ARXQ96QS3 562 aa34.92■■■■□ 3.18
TMEM54-205ENST00000475208 RRS1Q15050 365 aaKnown RBP34.91■■■■□ 3.18
TMEM54-205ENST00000475208 AKT1S1Q96B36 256 aa34.91■■■■□ 3.18
TMEM54-205ENST00000475208 PRIM1P49642 420 aaKnown RBP34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms