RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 ANP32CO43423 234 aa13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 IP6K1Q92551 441 aa13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 KIF24Q5T7B8 1368 aa13.8□□□□□ -0.2
TSPAN1-206ENST00000475163 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 HOXC9P31274 260 aa13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 EVA1CP58658 441 aa13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 FNBP4Q8N3X1 1017 aaPredicted RBP13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 ABCC6O95255 1503 aa13.79□□□□□ -0.2
TSPAN1-206ENST00000475163 MTHFSP49914 203 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 USP21Q9UK80 565 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 AFF2P51816 1311 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 FLT4P35916 1363 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 SLIT2O94813 1529 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 COL18A1P39060 1754 aa13.78□□□□□ -0.2
TSPAN1-206ENST00000475163 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 HSP90AB2PQ58FF8 381 aa13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 CAMTA1Q9Y6Y1 1673 aa13.77□□□□□ -0.21
TSPAN1-206ENST00000475163 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
TSPAN1-206ENST00000475163 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
TSPAN1-206ENST00000475163 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
TSPAN1-206ENST00000475163 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
TSPAN1-206ENST00000475163 STRN4Q9NRL3 753 aa13.76□□□□□ -0.21
TSPAN1-206ENST00000475163 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 INSRP06213 1382 aa13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 LTV1Q96GA3 475 aaPredicted RBP13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 CFAP53Q96M91 514 aa13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 RGPD5Q99666 1765 aa13.75□□□□□ -0.21
TSPAN1-206ENST00000475163 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
TSPAN1-206ENST00000475163 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
TSPAN1-206ENST00000475163 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 ERBB3P21860 1342 aa13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
TSPAN1-206ENST00000475163 VPS72Q15906 364 aa13.72□□□□□ -0.21
TSPAN1-206ENST00000475163 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-206ENST00000475163 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-206ENST00000475163 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-206ENST00000475163 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-206ENST00000475163 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-206ENST00000475163 QTRT2Q9H974 415 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-206ENST00000475163 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
TSPAN1-206ENST00000475163 ATRNO75882 1429 aa13.7□□□□□ -0.22
TSPAN1-206ENST00000475163 CRB1P82279 1406 aa13.7□□□□□ -0.22
TSPAN1-206ENST00000475163 IL13P35225 146 aa13.69□□□□□ -0.22
TSPAN1-206ENST00000475163 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
TSPAN1-206ENST00000475163 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
TSPAN1-206ENST00000475163 SPATA31A5Q5VU36 1347 aa13.68□□□□□ -0.22
TSPAN1-206ENST00000475163 SPATA31A7Q8IWB4 1347 aa13.68□□□□□ -0.22
TSPAN1-206ENST00000475163 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
TSPAN1-206ENST00000475163 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
TSPAN1-206ENST00000475163 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
TSPAN1-206ENST00000475163 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 EYA1Q99502 592 aa13.67□□□□□ -0.22
TSPAN1-206ENST00000475163 RGS12O14924 1447 aa13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 RXRBP28702 533 aa13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
TSPAN1-206ENST00000475163 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
TSPAN1-206ENST00000475163 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
TSPAN1-206ENST00000475163 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
TSPAN1-206ENST00000475163 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
TSPAN1-206ENST00000475163 GLI3P10071 1580 aa13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 SULT6B1Q6IMI4 303 aa13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 MIER1Q8N108 512 aa13.63□□□□□ -0.23
TSPAN1-206ENST00000475163 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 IL2RBP14784 551 aa13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
TSPAN1-206ENST00000475163 A0A0G2JS52 829 aa13.61□□□□□ -0.23
TSPAN1-206ENST00000475163 HMOX1P09601 288 aa13.61□□□□□ -0.23
TSPAN1-206ENST00000475163 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
TSPAN1-206ENST00000475163 MYT1Q01538 1121 aa13.61□□□□□ -0.23
TSPAN1-206ENST00000475163 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms