RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 WHAMMQ8TF30 809 aa2.52□□□□□ -2.01
HDAC9-222ENST00000474742 BCANQ96GW7 911 aa2.52□□□□□ -2.01
HDAC9-222ENST00000474742 POLMQ9NP87 494 aaPredicted RBP2.52□□□□□ -2.01
HDAC9-222ENST00000474742 ITGA6P23229 1130 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 RELBQ01201 579 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 RNFT1Q5M7Z0 435 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 FOXR1Q6PIV2 292 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 BEGAINQ9BUH8 593 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 TBC1D2Q9BYX2 928 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 SLC24A3Q9HC58 644 aa2.51□□□□□ -2.01
HDAC9-222ENST00000474742 ATP1B4Q9UN42 357 aaPredicted RBP2.51□□□□□ -2.01
HDAC9-222ENST00000474742 CFAP99D6REC4 459 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 ADAMTS2O95450 1211 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 SLURP2P0DP57 97 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 HRCP23327 699 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 GRM5P41594 1212 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 DHX9Q08211 1270 aaKnown RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 CBLBQ13191 982 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 C4orf48Q5BLP8 95 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 PPP1R26Q5T8A7 1209 aaPredicted RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 RSBN1LQ6PCB5 846 aaPredicted RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 GIGYF2Q6Y7W6 1299 aaKnown RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 RIC3Q7Z5B4 369 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 SH3RF1Q7Z6J0 888 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 ZBTB33Q86T24 672 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 BEND7Q8N7W2 519 aaPredicted RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 HELBQ8NG08 1087 aaPredicted RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 NANOS1Q8WY41 292 aaKnown RBP2.5□□□□□ -2.01
HDAC9-222ENST00000474742 SLC10A4Q96EP9 437 aa2.5□□□□□ -2.01
HDAC9-222ENST00000474742 SLC35F4A4IF30 521 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 TRIM66O15016 1216 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 PER1O15534 1290 aaPredicted RBP2.49□□□□□ -2.01
HDAC9-222ENST00000474742 SPINT1O43278 529 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 ADAM23O75077 832 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 ARHGEF15O94989 841 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 F12P00748 615 aaPredicted RBP2.49□□□□□ -2.01
HDAC9-222ENST00000474742 PRKCSHP14314 528 aaPredicted RBP2.49□□□□□ -2.01
HDAC9-222ENST00000474742 GJA5P36382 358 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 RAB15P59190 212 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 XP32Q5T750 250 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 RIPOR1Q6ZS17 1223 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 CABLES1Q8TDN4 633 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 AGBL1Q96MI9 1066 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 INSM2Q96T92 566 aaPredicted RBP2.49□□□□□ -2.01
HDAC9-222ENST00000474742 ARHGAP9Q9BRR9 750 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 ZNF395Q9H8N7 513 aaPredicted RBP2.49□□□□□ -2.01
HDAC9-222ENST00000474742 MAP4K5Q9Y4K4 846 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 PCDHB15Q9Y5E8 787 aa2.49□□□□□ -2.01
HDAC9-222ENST00000474742 CNTNAP5Q8WYK1 1306 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 K7ELQ4 463 aaPredicted RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 CELA2BP08218 269 aaPredicted RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 CTSOP43234 321 aaPredicted RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 SRSF11Q05519 484 aaKnown RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 AMHR2Q16671 573 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 PLA2G4EQ3MJ16 856 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 PRPF38BQ5VTL8 546 aaKnown RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 LYPD4Q6UWN0 246 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 PARP9Q8IXQ6 854 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 TRIM52Q96A61 297 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 DCAF5Q96JK2 942 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 TRERF1Q96PN7 1200 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 KCTD15Q96SI1 283 aaPredicted RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 SPOCK3Q9BQ16 436 aa2.48□□□□□ -2.01
HDAC9-222ENST00000474742 CDV3Q9UKY7 258 aaKnown RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 NSFL1CQ9UNZ2 370 aaKnown RBP2.48□□□□□ -2.01
HDAC9-222ENST00000474742 Q6ZVU0 165 aa2.47□□□□□ -2.01
HDAC9-222ENST00000474742 LYSMD3Q7Z3D4 306 aa2.47□□□□□ -2.01
HDAC9-222ENST00000474742 PRICKLE2Q7Z3G6 844 aa2.47□□□□□ -2.01
HDAC9-222ENST00000474742 TRMT44Q8IYL2 757 aaKnown RBP2.47□□□□□ -2.01
HDAC9-222ENST00000474742 GPKOWQ92917 476 aaPredicted RBP eCLIP2.47□□□□□ -2.01
HDAC9-222ENST00000474742 C1QTNF2Q9BXJ5 285 aa2.47□□□□□ -2.01
HDAC9-222ENST00000474742 RRAGCQ9HB90 399 aa2.47□□□□□ -2.01
HDAC9-222ENST00000474742 H7C1W4 665 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 GPR25O00155 361 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 BCRP11274 1271 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 RHOQP17081 205 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 MX2P20592 715 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 PDE4DQ08499 809 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 ERFEQ4G0M1 354 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 TPRNQ4KMQ1 711 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 SH3BP5LQ7L8J4 393 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 PNMA1Q8ND90 353 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 RNF217Q8TC41 542 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 AK7Q96M32 723 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 GAS2L1Q99501 681 aaPredicted RBP2.46□□□□□ -2.02
HDAC9-222ENST00000474742 GPBP1L1Q9HC44 474 aaPredicted RBP2.46□□□□□ -2.02
HDAC9-222ENST00000474742 MBIPQ9NS73 344 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 IGF1RP08069 1367 aa2.46□□□□□ -2.02
HDAC9-222ENST00000474742 MEN1O00255 615 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 AMPD1P23109 780 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 PTK2Q05397 1052 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 NBPF20Q3BBV1 942 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 SLC27A3Q5K4L6 730 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 FBXO31Q5XUX0 539 aaPredicted RBP2.45□□□□□ -2.02
HDAC9-222ENST00000474742 PDXDC2PQ6P474 469 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 DZIP3Q86Y13 1208 aaKnown RBP2.45□□□□□ -2.02
HDAC9-222ENST00000474742 GMCL1Q96IK5 515 aa2.45□□□□□ -2.02
HDAC9-222ENST00000474742 ESF1Q9H501 851 aaKnown RBP2.45□□□□□ -2.02
HDAC9-222ENST00000474742 ADH1AP07327 375 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 FURINP09958 794 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms