RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 TCP11L2Q8N4U5 519 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 COG3Q96JB2 828 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 BRWD3Q6RI45 1802 aa22.23■■□□□ 1.15
ITGB1-210ENST00000474568 FBLN1P23142 703 aa22.22■■□□□ 1.15
ITGB1-210ENST00000474568 CARD14Q9BXL6 1004 aa22.21■■□□□ 1.15
ITGB1-210ENST00000474568 CRB1P82279 1406 aa22.21■■□□□ 1.15
ITGB1-210ENST00000474568 COL18A1P39060 1754 aa22.2■■□□□ 1.14
ITGB1-210ENST00000474568 FYB1O15117 783 aa22.2■■□□□ 1.14
ITGB1-210ENST00000474568 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
ITGB1-210ENST00000474568 WDR17Q8IZU2 1322 aa22.2■■□□□ 1.14
ITGB1-210ENST00000474568 NSD3Q9BZ95 1437 aa22.2■■□□□ 1.14
ITGB1-210ENST00000474568 THSD7AQ9UPZ6 1657 aa22.19■■□□□ 1.14
ITGB1-210ENST00000474568 USP54Q70EL1 1684 aa22.18■■□□□ 1.14
ITGB1-210ENST00000474568 MYOM1P52179 1685 aa22.17■■□□□ 1.14
ITGB1-210ENST00000474568 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
ITGB1-210ENST00000474568 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
ITGB1-210ENST00000474568 EP400Q96L91 3159 aa22.15■■□□□ 1.14
ITGB1-210ENST00000474568 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
ITGB1-210ENST00000474568 LTV1Q96GA3 475 aaPredicted RBP22.15■■□□□ 1.14
ITGB1-210ENST00000474568 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.14
ITGB1-210ENST00000474568 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
ITGB1-210ENST00000474568 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
ITGB1-210ENST00000474568 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.13
ITGB1-210ENST00000474568 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
ITGB1-210ENST00000474568 DEFB132Q7Z7B7 95 aa22.13■■□□□ 1.13
ITGB1-210ENST00000474568 CCDC125Q86Z20 511 aa22.13■■□□□ 1.13
ITGB1-210ENST00000474568 CARD10Q9BWT7 1032 aa22.13■■□□□ 1.13
ITGB1-210ENST00000474568 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
ITGB1-210ENST00000474568 RGPD5Q99666 1765 aa22.12■■□□□ 1.13
ITGB1-210ENST00000474568 AMPHP49418 695 aa22.12■■□□□ 1.13
ITGB1-210ENST00000474568 ERBB3P21860 1342 aa22.11■■□□□ 1.13
ITGB1-210ENST00000474568 IP6K1Q92551 441 aa22.11■■□□□ 1.13
ITGB1-210ENST00000474568 ABCC6O95255 1503 aa22.11■■□□□ 1.13
ITGB1-210ENST00000474568 LTN1O94822 1766 aa22.1■■□□□ 1.13
ITGB1-210ENST00000474568 PANK3Q9H999 370 aa22.1■■□□□ 1.13
ITGB1-210ENST00000474568 HOXC9P31274 260 aa22.09■■□□□ 1.13
ITGB1-210ENST00000474568 DDB1Q16531 1140 aa22.08■■□□□ 1.13
ITGB1-210ENST00000474568 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
ITGB1-210ENST00000474568 FAM196AQ6ZSG2 479 aa22.07■■□□□ 1.12
ITGB1-210ENST00000474568 KIF7Q2M1P5 1343 aa22.06■■□□□ 1.12
ITGB1-210ENST00000474568 TRIM37O94972 964 aa22.06■■□□□ 1.12
ITGB1-210ENST00000474568 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
ITGB1-210ENST00000474568 KIF20BQ96Q89 1820 aa22.06■■□□□ 1.12
ITGB1-210ENST00000474568 CDCA7Q9BWT1 371 aaPredicted RBP22.04■■□□□ 1.12
ITGB1-210ENST00000474568 DISP2A7MBM2 1401 aa22.04■■□□□ 1.12
ITGB1-210ENST00000474568 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
ITGB1-210ENST00000474568 BAG6P46379 1132 aa22.03■■□□□ 1.12
ITGB1-210ENST00000474568 EMILIN1Q9Y6C2 1016 aa22.03■■□□□ 1.12
ITGB1-210ENST00000474568 PARP4Q9UKK3 1724 aaKnown RBP22.03■■□□□ 1.12
ITGB1-210ENST00000474568 PPM1GO15355 546 aaPredicted RBP22.02■■□□□ 1.12
ITGB1-210ENST00000474568 LRRC37A3O60309 1634 aa22.02■■□□□ 1.11
ITGB1-210ENST00000474568 RTL1A6NKG5 1358 aa22.01■■□□□ 1.11
ITGB1-210ENST00000474568 EXOC5O00471 708 aa22.01■■□□□ 1.11
ITGB1-210ENST00000474568 EN1Q05925 392 aaPredicted RBP22.01■■□□□ 1.11
ITGB1-210ENST00000474568 HSP90AB2PQ58FF8 381 aa22.01■■□□□ 1.11
ITGB1-210ENST00000474568 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
ITGB1-210ENST00000474568 IL2RBP14784 551 aa22■■□□□ 1.11
ITGB1-210ENST00000474568 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
ITGB1-210ENST00000474568 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
ITGB1-210ENST00000474568 APBA3O96018 575 aa21.98■■□□□ 1.11
ITGB1-210ENST00000474568 WNK3Q9BYP7 1800 aa21.97■■□□□ 1.11
ITGB1-210ENST00000474568 KNSTRNQ9Y448 316 aa21.97■■□□□ 1.11
ITGB1-210ENST00000474568 FLT4P35916 1363 aa21.97■■□□□ 1.11
ITGB1-210ENST00000474568 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
ITGB1-210ENST00000474568 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
ITGB1-210ENST00000474568 PEAK1Q9H792 1746 aa21.96■■□□□ 1.11
ITGB1-210ENST00000474568 TNS2Q63HR2 1409 aa21.96■■□□□ 1.11
ITGB1-210ENST00000474568 EZH2Q15910 746 aaKnown RBP21.95■■□□□ 1.1
ITGB1-210ENST00000474568 INSRP06213 1382 aa21.95■■□□□ 1.1
ITGB1-210ENST00000474568 SMG6Q86US8 1419 aaKnown RBP21.95■■□□□ 1.1
ITGB1-210ENST00000474568 RGPD1P0DJD0 1748 aa21.94■■□□□ 1.1
ITGB1-210ENST00000474568 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
ITGB1-210ENST00000474568 PTF1AQ7RTS3 328 aa21.93■■□□□ 1.1
ITGB1-210ENST00000474568 MORC1Q86VD1 984 aa21.93■■□□□ 1.1
ITGB1-210ENST00000474568 POLKQ9UBT6 870 aa21.93■■□□□ 1.1
ITGB1-210ENST00000474568 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
ITGB1-210ENST00000474568 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
ITGB1-210ENST00000474568 DDX54Q8TDD1 881 aaKnown RBP21.91■■□□□ 1.1
ITGB1-210ENST00000474568 NSD2O96028 1365 aa21.9■■□□□ 1.1
ITGB1-210ENST00000474568 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
ITGB1-210ENST00000474568 ACSBG1Q96GR2 724 aa21.9■■□□□ 1.1
ITGB1-210ENST00000474568 CAMKK2Q96RR4 588 aa21.89■■□□□ 1.09
ITGB1-210ENST00000474568 MEGF6O75095 1541 aa21.89■■□□□ 1.09
ITGB1-210ENST00000474568 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
ITGB1-210ENST00000474568 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
ITGB1-210ENST00000474568 RGPD2P0DJD1 1756 aa21.88■■□□□ 1.09
ITGB1-210ENST00000474568 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
ITGB1-210ENST00000474568 BCL11BQ9C0K0 894 aaPredicted RBP21.87■■□□□ 1.09
ITGB1-210ENST00000474568 PSDA5PKW4 1024 aaPredicted RBP21.86■■□□□ 1.09
ITGB1-210ENST00000474568 KCNQ2O43526 872 aa21.86■■□□□ 1.09
ITGB1-210ENST00000474568 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
ITGB1-210ENST00000474568 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
ITGB1-210ENST00000474568 TATP17735 454 aaPredicted RBP21.85■■□□□ 1.09
ITGB1-210ENST00000474568 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
ITGB1-210ENST00000474568 BCL9O00512 1426 aa21.84■■□□□ 1.09
ITGB1-210ENST00000474568 PER1O15534 1290 aaPredicted RBP21.84■■□□□ 1.09
ITGB1-210ENST00000474568 EIF4A2Q14240 407 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms