RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 FBLN1P23142 703 aa11.21□□□□□ -0.61
CNN3-205ENST00000474409 MTHFSP49914 203 aa11.21□□□□□ -0.61
CNN3-205ENST00000474409 EMILIN1Q9Y6C2 1016 aa11.21□□□□□ -0.61
CNN3-205ENST00000474409 BLMP54132 1417 aaPredicted RBP11.2□□□□□ -0.62
CNN3-205ENST00000474409 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
CNN3-205ENST00000474409 HSPA1LP34931 641 aa11.2□□□□□ -0.62
CNN3-205ENST00000474409 AMPHP49418 695 aa11.2□□□□□ -0.62
CNN3-205ENST00000474409 CPDO75976 1380 aa11.19□□□□□ -0.62
CNN3-205ENST00000474409 ZC3H6P61129 1189 aaKnown RBP11.19□□□□□ -0.62
CNN3-205ENST00000474409 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
CNN3-205ENST00000474409 LRP6O75581 1613 aa11.18□□□□□ -0.62
CNN3-205ENST00000474409 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
CNN3-205ENST00000474409 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
CNN3-205ENST00000474409 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
CNN3-205ENST00000474409 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
CNN3-205ENST00000474409 INSRP06213 1382 aa11.16□□□□□ -0.62
CNN3-205ENST00000474409 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
CNN3-205ENST00000474409 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
CNN3-205ENST00000474409 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
CNN3-205ENST00000474409 HOXC9P31274 260 aa11.16□□□□□ -0.62
CNN3-205ENST00000474409 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
CNN3-205ENST00000474409 ARHGEF25Q86VW2 580 aa11.16□□□□□ -0.62
CNN3-205ENST00000474409 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
CNN3-205ENST00000474409 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
CNN3-205ENST00000474409 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
CNN3-205ENST00000474409 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
CNN3-205ENST00000474409 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
CNN3-205ENST00000474409 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
CNN3-205ENST00000474409 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
CNN3-205ENST00000474409 HSP90AB2PQ58FF8 381 aa11.14□□□□□ -0.63
CNN3-205ENST00000474409 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
CNN3-205ENST00000474409 IP6K1Q92551 441 aa11.14□□□□□ -0.63
CNN3-205ENST00000474409 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
CNN3-205ENST00000474409 ADAMTS2O95450 1211 aa11.13□□□□□ -0.63
CNN3-205ENST00000474409 LTV1Q96GA3 475 aaPredicted RBP11.13□□□□□ -0.63
CNN3-205ENST00000474409 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
CNN3-205ENST00000474409 ERBB3P21860 1342 aa11.12□□□□□ -0.63
CNN3-205ENST00000474409 EIF4A2Q14240 407 aaKnown RBP11.12□□□□□ -0.63
CNN3-205ENST00000474409 MEX3CQ5U5Q3 659 aaKnown RBP11.12□□□□□ -0.63
CNN3-205ENST00000474409 SLIT2O94813 1529 aa11.11□□□□□ -0.63
CNN3-205ENST00000474409 LRRC37A3O60309 1634 aa11.11□□□□□ -0.63
CNN3-205ENST00000474409 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
CNN3-205ENST00000474409 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
CNN3-205ENST00000474409 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
CNN3-205ENST00000474409 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
CNN3-205ENST00000474409 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
CNN3-205ENST00000474409 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
CNN3-205ENST00000474409 IL13P35225 146 aa11.1□□□□□ -0.63
CNN3-205ENST00000474409 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
CNN3-205ENST00000474409 CRB1P82279 1406 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 FAM83GA6ND36 823 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 BTG4Q9NY30 223 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 ITGB4P16144 1822 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
CNN3-205ENST00000474409 EVA1CP58658 441 aa11.08□□□□□ -0.64
CNN3-205ENST00000474409 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
CNN3-205ENST00000474409 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
CNN3-205ENST00000474409 DOT1LQ8TEK3 1739 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 KDRP35968 1356 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 NEFMP07197 916 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 HMOX1P09601 288 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 NLRP2Q9NX02 1062 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 ADAMTS8Q9UP79 889 aa11.07□□□□□ -0.64
CNN3-205ENST00000474409 MEGF6O75095 1541 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
CNN3-205ENST00000474409 EYA1Q99502 592 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
CNN3-205ENST00000474409 GLI3P10071 1580 aa11.06□□□□□ -0.64
CNN3-205ENST00000474409 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
CNN3-205ENST00000474409 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
CNN3-205ENST00000474409 AEBP1Q8IUX7 1158 aa11.05□□□□□ -0.64
CNN3-205ENST00000474409 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
CNN3-205ENST00000474409 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
CNN3-205ENST00000474409 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
CNN3-205ENST00000474409 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
CNN3-205ENST00000474409 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
CNN3-205ENST00000474409 NBPF4Q96M43 638 aa11.04□□□□□ -0.64
CNN3-205ENST00000474409 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
CNN3-205ENST00000474409 AFF2P51816 1311 aa11.04□□□□□ -0.64
CNN3-205ENST00000474409 FCHSD2O94868 740 aa11.03□□□□□ -0.64
CNN3-205ENST00000474409 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNN3-205ENST00000474409 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
CNN3-205ENST00000474409 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
CNN3-205ENST00000474409 KDM3BQ7LBC6 1761 aa11.03□□□□□ -0.64
CNN3-205ENST00000474409 OVOS2A0A0G2JMS6 1433 aa11.02□□□□□ -0.64
CNN3-205ENST00000474409 UNC5CLQ8IV45 518 aa11.02□□□□□ -0.65
CNN3-205ENST00000474409 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
CNN3-205ENST00000474409 CARD10Q9BWT7 1032 aa11.02□□□□□ -0.65
CNN3-205ENST00000474409 USP35Q9P2H5 1018 aa11.02□□□□□ -0.65
CNN3-205ENST00000474409 USP21Q9UK80 565 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms