RNA–Protein interactions for RNA: ENST00000474370.1

RP9-203, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 2

Gene RP9, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-203ENST00000474370 PARD3Q8TEW0 1356 aa36.01■■■■□ 3.35
RP9-203ENST00000474370 CD163L1Q9NR16 1453 aa36■■■■□ 3.35
RP9-203ENST00000474370 R3HDM1Q15032 1099 aaKnown RBP36■■■■□ 3.35
RP9-203ENST00000474370 USP54Q70EL1 1684 aa35.98■■■■□ 3.35
RP9-203ENST00000474370 KCNH5Q8NCM2 988 aa35.98■■■■□ 3.35
RP9-203ENST00000474370 WDR17Q8IZU2 1322 aa35.98■■■■□ 3.35
RP9-203ENST00000474370 NUP188Q5SRE5 1749 aa35.97■■■■□ 3.35
RP9-203ENST00000474370 TOM1L2Q6ZVM7 507 aa35.96■■■■□ 3.35
RP9-203ENST00000474370 SBF2Q86WG5 1849 aa35.95■■■■□ 3.35
RP9-203ENST00000474370 TONSLQ96HA7 1378 aa35.94■■■■□ 3.34
RP9-203ENST00000474370 SOX12O15370 315 aa35.93■■■■□ 3.34
RP9-203ENST00000474370 OVOS2A0A0G2JMS6 1433 aa35.92■■■■□ 3.34
RP9-203ENST00000474370 OVOS2A0A0J9YW53 1432 aa35.92■■■■□ 3.34
RP9-203ENST00000474370 OVOS2Q6IE36 1432 aa35.92■■■■□ 3.34
RP9-203ENST00000474370 USP31Q70CQ4 1352 aa35.92■■■■□ 3.34
RP9-203ENST00000474370 ABCC6O95255 1503 aa35.91■■■■□ 3.34
RP9-203ENST00000474370 C11orf95C9JLR9 678 aaPredicted RBP35.89■■■■□ 3.34
RP9-203ENST00000474370 DDB1Q16531 1140 aa35.89■■■■□ 3.34
RP9-203ENST00000474370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.88■■■■□ 3.33
RP9-203ENST00000474370 CARD10Q9BWT7 1032 aa35.86■■■■□ 3.33
RP9-203ENST00000474370 SLC12A5Q9H2X9 1139 aa35.86■■■■□ 3.33
RP9-203ENST00000474370 NME9Q86XW9 330 aa35.85■■■■□ 3.33
RP9-203ENST00000474370 RGPD3A6NKT7 1758 aaPredicted RBP35.84■■■■□ 3.33
RP9-203ENST00000474370 RGPD4Q7Z3J3 1758 aa35.84■■■■□ 3.33
RP9-203ENST00000474370 MARCH10Q8NA82 808 aaPredicted RBP35.83■■■■□ 3.33
RP9-203ENST00000474370 CDCA7Q9BWT1 371 aaPredicted RBP35.83■■■■□ 3.33
RP9-203ENST00000474370 LTN1O94822 1766 aa35.82■■■■□ 3.33
RP9-203ENST00000474370 TMC1Q8TDI8 760 aa35.82■■■■□ 3.32
RP9-203ENST00000474370 PUS7Q96PZ0 661 aaKnown RBP35.81■■■■□ 3.32
RP9-203ENST00000474370 BCL9O00512 1426 aa35.81■■■■□ 3.32
RP9-203ENST00000474370 EDC4Q6P2E9 1401 aaKnown RBP35.81■■■■□ 3.32
RP9-203ENST00000474370 A0A1W2PP64 1363 aa35.8■■■■□ 3.32
RP9-203ENST00000474370 CSB-PGBD3P0DP91 1061 aa35.8■■■■□ 3.32
RP9-203ENST00000474370 PTF1AQ7RTS3 328 aa35.8■■■■□ 3.32
RP9-203ENST00000474370 TESK2Q96S53 571 aa35.79■■■■□ 3.32
RP9-203ENST00000474370 HDGFL2Q7Z4V5 671 aaPredicted RBP35.78■■■■□ 3.32
RP9-203ENST00000474370 CCDC7Q96M83 1385 aa35.77■■■■□ 3.32
RP9-203ENST00000474370 PLSCR1O15162 318 aa35.75■■■■□ 3.31
RP9-203ENST00000474370 BCL11BQ9C0K0 894 aaPredicted RBP35.75■■■■□ 3.31
RP9-203ENST00000474370 NBPF14Q5TI25 921 aa35.74■■■■□ 3.31
RP9-203ENST00000474370 ERBB3P21860 1342 aa35.74■■■■□ 3.31
RP9-203ENST00000474370 TERF2IPQ9NYB0 399 aa35.73■■■■□ 3.31
RP9-203ENST00000474370 ST20-MTHFSA0A0A6YYL1 179 aa35.72■■■■□ 3.31
RP9-203ENST00000474370 TNS2Q63HR2 1409 aa35.71■■■■□ 3.31
RP9-203ENST00000474370 EXOC5O00471 708 aa35.69■■■■□ 3.3
RP9-203ENST00000474370 TRIM26Q12899 539 aaPredicted RBP35.68■■■■□ 3.3
RP9-203ENST00000474370 NINLQ9Y2I6 1382 aa35.66■■■■□ 3.3
RP9-203ENST00000474370 PROM2Q8N271 834 aa35.66■■■■□ 3.3
RP9-203ENST00000474370 ANO8Q9HCE9 1232 aaPredicted RBP35.64■■■■□ 3.3
RP9-203ENST00000474370 NLRP2Q9NX02 1062 aa35.64■■■■□ 3.3
RP9-203ENST00000474370 ANKRD24Q8TF21 1146 aa35.63■■■■□ 3.29
RP9-203ENST00000474370 NHSQ6T4R5 1651 aa35.62■■■■□ 3.29
RP9-203ENST00000474370 CASZ1Q86V15 1759 aa35.59■■■■□ 3.29
RP9-203ENST00000474370 KCNQ2O43526 872 aa35.57■■■■□ 3.28
RP9-203ENST00000474370 SLC24A1O60721 1099 aa35.57■■■■□ 3.28
RP9-203ENST00000474370 IL2RBP14784 551 aa35.57■■■■□ 3.28
RP9-203ENST00000474370 IP6K1Q92551 441 aa35.57■■■■□ 3.28
RP9-203ENST00000474370 FAM208AQ9UK61 1670 aaKnown RBP35.56■■■■□ 3.28
RP9-203ENST00000474370 ANKRD36BQ8N2N9 1353 aa35.54■■■■□ 3.28
RP9-203ENST00000474370 USP47Q96K76 1375 aa35.53■■■■□ 3.28
RP9-203ENST00000474370 SPON1Q9HCB6 807 aa35.53■■■■□ 3.28
RP9-203ENST00000474370 TXNRD1Q16881 649 aa35.52■■■■□ 3.28
RP9-203ENST00000474370 FBLN1P23142 703 aa35.5■■■■□ 3.27
RP9-203ENST00000474370 COG3Q96JB2 828 aa35.5■■■■□ 3.27
RP9-203ENST00000474370 MAP3K19Q56UN5 1328 aa35.5■■■■□ 3.27
RP9-203ENST00000474370 ACSBG1Q96GR2 724 aa35.49■■■■□ 3.27
RP9-203ENST00000474370 PDGFDQ9GZP0 370 aaPredicted RBP35.49■■■■□ 3.27
RP9-203ENST00000474370 BTAF1O14981 1849 aa35.48■■■■□ 3.27
RP9-203ENST00000474370 RGPD2P0DJD1 1756 aa35.47■■■■□ 3.27
RP9-203ENST00000474370 HOXC9P31274 260 aa35.45■■■■□ 3.27
RP9-203ENST00000474370 TMF1P82094 1093 aa35.45■■■■□ 3.27
RP9-203ENST00000474370 LTV1Q96GA3 475 aaPredicted RBP35.44■■■■□ 3.26
RP9-203ENST00000474370 PAPPAQ13219 1627 aa35.43■■■■□ 3.26
RP9-203ENST00000474370 FYB1O15117 783 aa35.42■■■■□ 3.26
RP9-203ENST00000474370 SLC15A2Q16348 729 aa35.41■■■■□ 3.26
RP9-203ENST00000474370 SHANK3Q9BYB0 1731 aa35.4■■■■□ 3.26
RP9-203ENST00000474370 KAT6BQ8WYB5 2073 aa35.39■■■■□ 3.26
RP9-203ENST00000474370 STK32BQ9NY57 414 aa35.39■■■■□ 3.26
RP9-203ENST00000474370 MYOM1P52179 1685 aa35.38■■■■□ 3.25
RP9-203ENST00000474370 AMPHP49418 695 aa35.38■■■■□ 3.25
RP9-203ENST00000474370 GGNBP2Q9H3C7 697 aa35.38■■■■□ 3.25
RP9-203ENST00000474370 PPP1R1BQ9UD71 204 aaPredicted RBP35.38■■■■□ 3.25
RP9-203ENST00000474370 KIF20BQ96Q89 1820 aa35.38■■■■□ 3.25
RP9-203ENST00000474370 RTL1A6NKG5 1358 aa35.38■■■■□ 3.25
RP9-203ENST00000474370 RRS1Q15050 365 aaKnown RBP35.36■■■■□ 3.25
RP9-203ENST00000474370 ZBTB7AO95365 584 aa35.35■■■■□ 3.25
RP9-203ENST00000474370 MEGF6O75095 1541 aa35.34■■■■□ 3.25
RP9-203ENST00000474370 PTGER2P43116 358 aa35.34■■■■□ 3.25
RP9-203ENST00000474370 DDX54Q8TDD1 881 aaKnown RBP35.34■■■■□ 3.25
RP9-203ENST00000474370 DOT1LQ8TEK3 1739 aa35.3■■■■□ 3.24
RP9-203ENST00000474370 LRRC4BQ9NT99 713 aa35.3■■■■□ 3.24
RP9-203ENST00000474370 CDCA8Q53HL2 280 aa35.29■■■■□ 3.24
RP9-203ENST00000474370 NBPF6Q5VWK0 638 aa35.29■■■■□ 3.24
RP9-203ENST00000474370 NBPF4Q96M43 638 aa35.29■■■■□ 3.24
RP9-203ENST00000474370 TIMELESSQ9UNS1 1208 aa35.29■■■■□ 3.24
RP9-203ENST00000474370 CARD14Q9BXL6 1004 aa35.28■■■■□ 3.24
RP9-203ENST00000474370 ATF5Q9Y2D1 282 aaPredicted RBP35.28■■■■□ 3.24
RP9-203ENST00000474370 ZNF827Q17R98 1081 aa35.26■■■■□ 3.24
RP9-203ENST00000474370 ZCRB1Q8TBF4 217 aaKnown RBP35.25■■■■□ 3.23
RP9-203ENST00000474370 NSD2O96028 1365 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms