RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CTHP32929 405 aa4.73□□□□□ -1.65
CALD1-216ENST00000473714 GRM5P41594 1212 aa4.73□□□□□ -1.65
CALD1-216ENST00000473714 LYPD4Q6UWN0 246 aa4.73□□□□□ -1.65
CALD1-216ENST00000473714 BEND7Q8N7W2 519 aaPredicted RBP4.73□□□□□ -1.65
CALD1-216ENST00000473714 SCRIBQ14160 1630 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 ITGA6P23229 1130 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 AGERQ15109 404 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 PODNQ7Z5L7 613 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 FOXJ1Q92949 421 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 PCDHGC3Q9UN70 934 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 KIF21AQ7Z4S6 1674 aa4.72□□□□□ -1.65
CALD1-216ENST00000473714 PROCP04070 461 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 CELA2BP08218 269 aaPredicted RBP4.71□□□□□ -1.66
CALD1-216ENST00000473714 SRSF11Q05519 484 aaKnown RBP4.71□□□□□ -1.66
CALD1-216ENST00000473714 TPRNQ4KMQ1 711 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 DESI1Q6ICB0 168 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 GPIHBP1Q8IV16 184 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 PRR7Q8TB68 274 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 EMILIN1Q9Y6C2 1016 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 CNTNAP5Q8WYK1 1306 aa4.71□□□□□ -1.66
CALD1-216ENST00000473714 NCAPD3P42695 1498 aa4.7□□□□□ -1.66
CALD1-216ENST00000473714 SLC35F4A4IF30 521 aa4.7□□□□□ -1.66
CALD1-216ENST00000473714 SPDYE5A6NIY4 337 aa4.7□□□□□ -1.66
CALD1-216ENST00000473714 SH3RF1Q7Z6J0 888 aa4.69□□□□□ -1.66
CALD1-216ENST00000473714 BPHLQ86WA6 291 aaPredicted RBP4.69□□□□□ -1.66
CALD1-216ENST00000473714 KRTAP1-3Q8IUG1 177 aa4.69□□□□□ -1.66
CALD1-216ENST00000473714 NEDD1Q8NHV4 660 aa4.69□□□□□ -1.66
CALD1-216ENST00000473714 IRF6O14896 467 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 ITGB2P05107 769 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 CLCN1P35523 988 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 BAG6P46379 1132 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 MAP2K5Q13163 448 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 KRI1Q8N9T8 703 aaKnown RBP4.68□□□□□ -1.66
CALD1-216ENST00000473714 GPCPD1Q9NPB8 672 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 FAM217BQ9NTX9 383 aaPredicted RBP4.68□□□□□ -1.66
CALD1-216ENST00000473714 KDM2AQ9Y2K7 1162 aa4.68□□□□□ -1.66
CALD1-216ENST00000473714 HECW2Q9P2P5 1572 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 LAMC3Q9Y6N6 1575 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 PDS5BQ9NTI5 1447 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 SPINT1O43278 529 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 FSHRP23945 695 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 MTMR2Q13614 643 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 LYPD8Q6UX82 237 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 CCDC116Q8IYX3 515 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 WDR62O43379 1518 aa4.67□□□□□ -1.66
CALD1-216ENST00000473714 FURINP09958 794 aa4.66□□□□□ -1.66
CALD1-216ENST00000473714 VASH1Q7L8A9 365 aaPredicted RBP4.66□□□□□ -1.66
CALD1-216ENST00000473714 PGPEP1Q9NXJ5 209 aa4.66□□□□□ -1.66
CALD1-216ENST00000473714 MINK1Q8N4C8 1332 aaPredicted RBP4.66□□□□□ -1.66
CALD1-216ENST00000473714 MRC2Q9UBG0 1479 aa4.65□□□□□ -1.66
CALD1-216ENST00000473714 NDUFV2P19404 249 aa4.65□□□□□ -1.67
CALD1-216ENST00000473714 C4orf48Q5BLP8 95 aa4.65□□□□□ -1.67
CALD1-216ENST00000473714 MAP4K5Q9Y4K4 846 aa4.65□□□□□ -1.67
CALD1-216ENST00000473714 BCRP11274 1271 aa4.64□□□□□ -1.67
CALD1-216ENST00000473714 CBLBQ13191 982 aa4.64□□□□□ -1.67
CALD1-216ENST00000473714 SPIRE2Q8WWL2 714 aa4.64□□□□□ -1.67
CALD1-216ENST00000473714 MAP10Q9P2G4 905 aa4.64□□□□□ -1.67
CALD1-216ENST00000473714 RSF1Q96T23 1441 aaPredicted RBP4.63□□□□□ -1.67
CALD1-216ENST00000473714 SYNJ2O15056 1496 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 MOXD2PA6NHM9 499 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 CTSOP43234 321 aaPredicted RBP4.63□□□□□ -1.67
CALD1-216ENST00000473714 GAS6Q14393 721 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 FOXR1Q6PIV2 292 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 Q6ZVU0 165 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 ARMC2Q8NEN0 867 aa4.63□□□□□ -1.67
CALD1-216ENST00000473714 PPP1R26Q5T8A7 1209 aaPredicted RBP4.62□□□□□ -1.67
CALD1-216ENST00000473714 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
CALD1-216ENST00000473714 C1QTNF2Q9BXJ5 285 aa4.62□□□□□ -1.67
CALD1-216ENST00000473714 POLMQ9NP87 494 aaPredicted RBP4.62□□□□□ -1.67
CALD1-216ENST00000473714 MBIPQ9NS73 344 aa4.62□□□□□ -1.67
CALD1-216ENST00000473714 SENP3-EIF4A1A0A087X0R7 540 aa4.61□□□□□ -1.67
CALD1-216ENST00000473714 MAGEB6P1A0A0J9YX57 407 aa4.61□□□□□ -1.67
CALD1-216ENST00000473714 F12P00748 615 aaPredicted RBP4.61□□□□□ -1.67
CALD1-216ENST00000473714 SSTR3P32745 418 aaPredicted RBP4.61□□□□□ -1.67
CALD1-216ENST00000473714 TRMT44Q8IYL2 757 aaKnown RBP4.61□□□□□ -1.67
CALD1-216ENST00000473714 CCDC102AQ96A19 550 aa4.61□□□□□ -1.67
CALD1-216ENST00000473714 INSM2Q96T92 566 aaPredicted RBP4.61□□□□□ -1.67
CALD1-216ENST00000473714 IGF1RP08069 1367 aa4.61□□□□□ -1.67
CALD1-216ENST00000473714 KRBA1A5PL33 1030 aa4.6□□□□□ -1.67
CALD1-216ENST00000473714 BTBD11A6QL63 1104 aa4.6□□□□□ -1.67
CALD1-216ENST00000473714 RELBQ01201 579 aa4.6□□□□□ -1.67
CALD1-216ENST00000473714 ALYREFQ86V81 257 aaKnown RBP4.6□□□□□ -1.67
CALD1-216ENST00000473714 GMCL1Q96IK5 515 aa4.6□□□□□ -1.67
CALD1-216ENST00000473714 AGBL1Q96MI9 1066 aa4.6□□□□□ -1.67
CALD1-216ENST00000473714 NBPF14Q5TI25 921 aa4.59□□□□□ -1.67
CALD1-216ENST00000473714 SPATA31D1Q6ZQQ2 1576 aa4.59□□□□□ -1.67
CALD1-216ENST00000473714 RNF217Q8TC41 542 aa4.59□□□□□ -1.67
CALD1-216ENST00000473714 LRRC4BQ9NT99 713 aa4.59□□□□□ -1.67
CALD1-216ENST00000473714 CUEDC1Q9NWM3 386 aaPredicted RBP4.59□□□□□ -1.67
CALD1-216ENST00000473714 NSFL1CQ9UNZ2 370 aaKnown RBP4.59□□□□□ -1.67
CALD1-216ENST00000473714 HMGXB3Q12766 1538 aa4.58□□□□□ -1.68
CALD1-216ENST00000473714 CFAP99D6REC4 459 aa4.58□□□□□ -1.68
CALD1-216ENST00000473714 DHX9Q08211 1270 aaKnown RBP4.58□□□□□ -1.68
CALD1-216ENST00000473714 ACDQ96AP0 544 aa4.58□□□□□ -1.68
CALD1-216ENST00000473714 CARD14Q9BXL6 1004 aa4.58□□□□□ -1.68
CALD1-216ENST00000473714 ZNF395Q9H8N7 513 aaPredicted RBP4.58□□□□□ -1.68
CALD1-216ENST00000473714 MKL2Q9ULH7 1088 aa4.58□□□□□ -1.68
CALD1-216ENST00000473714 ATAD2BQ9ULI0 1458 aa4.57□□□□□ -1.68
CALD1-216ENST00000473714 GPR25O00155 361 aa4.57□□□□□ -1.68
CALD1-216ENST00000473714 GJA5P36382 358 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms