RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 RGPD1P0DJD0 1748 aa29.2■■■□□ 2.27
IMP4-213ENST00000473689 ST20-MTHFSA0A0A6YYL1 179 aa29.2■■■□□ 2.26
IMP4-213ENST00000473689 APBA3O96018 575 aa29.19■■■□□ 2.26
IMP4-213ENST00000473689 HDGFL2Q7Z4V5 671 aaPredicted RBP29.19■■■□□ 2.26
IMP4-213ENST00000473689 NME9Q86XW9 330 aa29.19■■■□□ 2.26
IMP4-213ENST00000473689 NFAT5O94916 1531 aa29.17■■■□□ 2.26
IMP4-213ENST00000473689 PSDA5PKW4 1024 aaPredicted RBP29.17■■■□□ 2.26
IMP4-213ENST00000473689 C11orf95C9JLR9 678 aaPredicted RBP29.16■■■□□ 2.26
IMP4-213ENST00000473689 CARD10Q9BWT7 1032 aa29.16■■■□□ 2.26
IMP4-213ENST00000473689 TERF2IPQ9NYB0 399 aa29.16■■■□□ 2.26
IMP4-213ENST00000473689 TNS1Q9HBL0 1735 aaKnown RBP29.15■■■□□ 2.26
IMP4-213ENST00000473689 SLC24A1O60721 1099 aa29.14■■■□□ 2.26
IMP4-213ENST00000473689 DDB1Q16531 1140 aa29.14■■■□□ 2.26
IMP4-213ENST00000473689 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.25
IMP4-213ENST00000473689 EDC4Q6P2E9 1401 aaKnown RBP29.13■■■□□ 2.25
IMP4-213ENST00000473689 CDCA7Q9BWT1 371 aaPredicted RBP29.13■■■□□ 2.25
IMP4-213ENST00000473689 A0A1W2PP64 1363 aa29.13■■■□□ 2.25
IMP4-213ENST00000473689 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
IMP4-213ENST00000473689 PARP4Q9UKK3 1724 aaKnown RBP29.12■■■□□ 2.25
IMP4-213ENST00000473689 CSB-PGBD3P0DP91 1061 aa29.11■■■□□ 2.25
IMP4-213ENST00000473689 R3HDM1Q15032 1099 aaKnown RBP29.1■■■□□ 2.25
IMP4-213ENST00000473689 NINLQ9Y2I6 1382 aa29.08■■■□□ 2.25
IMP4-213ENST00000473689 OVOS2A0A0G2JMS6 1433 aa29.08■■■□□ 2.25
IMP4-213ENST00000473689 OVOS2A0A0J9YW53 1432 aa29.08■■■□□ 2.25
IMP4-213ENST00000473689 OVOS2Q6IE36 1432 aa29.08■■■□□ 2.25
IMP4-213ENST00000473689 ABCC6O95255 1503 aa29.08■■■□□ 2.25
IMP4-213ENST00000473689 MARCH10Q8NA82 808 aaPredicted RBP29.07■■■□□ 2.24
IMP4-213ENST00000473689 USP54Q70EL1 1684 aa29.05■■■□□ 2.24
IMP4-213ENST00000473689 CCDC7Q96M83 1385 aa29.05■■■□□ 2.24
IMP4-213ENST00000473689 ERBB3P21860 1342 aa29.04■■■□□ 2.24
IMP4-213ENST00000473689 BCL9O00512 1426 aa29.03■■■□□ 2.24
IMP4-213ENST00000473689 PEAK1Q9H792 1746 aa29.03■■■□□ 2.24
IMP4-213ENST00000473689 LRRC37A3O60309 1634 aa29.03■■■□□ 2.24
IMP4-213ENST00000473689 EXOC5O00471 708 aa29.02■■■□□ 2.24
IMP4-213ENST00000473689 TIMELESSQ9UNS1 1208 aa29.02■■■□□ 2.24
IMP4-213ENST00000473689 PLSCR1O15162 318 aa29.01■■■□□ 2.23
IMP4-213ENST00000473689 PTF1AQ7RTS3 328 aa29.01■■■□□ 2.23
IMP4-213ENST00000473689 BCL11BQ9C0K0 894 aaPredicted RBP29.01■■■□□ 2.23
IMP4-213ENST00000473689 USP47Q96K76 1375 aa29.01■■■□□ 2.23
IMP4-213ENST00000473689 RGPD5Q99666 1765 aa28.99■■■□□ 2.23
IMP4-213ENST00000473689 TMF1P82094 1093 aa28.99■■■□□ 2.23
IMP4-213ENST00000473689 LRP5O75197 1615 aa28.98■■■□□ 2.23
IMP4-213ENST00000473689 ANKRD24Q8TF21 1146 aa28.98■■■□□ 2.23
IMP4-213ENST00000473689 NLRP2Q9NX02 1062 aa28.98■■■□□ 2.23
IMP4-213ENST00000473689 NBPF14Q5TI25 921 aa28.97■■■□□ 2.23
IMP4-213ENST00000473689 IP6K1Q92551 441 aa28.97■■■□□ 2.23
IMP4-213ENST00000473689 ANKRD36BQ8N2N9 1353 aa28.97■■■□□ 2.23
IMP4-213ENST00000473689 CLSPNQ9HAW4 1339 aa28.95■■■□□ 2.23
IMP4-213ENST00000473689 COG3Q96JB2 828 aa28.95■■■□□ 2.22
IMP4-213ENST00000473689 RREB1Q92766 1687 aa28.93■■■□□ 2.22
IMP4-213ENST00000473689 IL2RBP14784 551 aa28.92■■■□□ 2.22
IMP4-213ENST00000473689 PROM2Q8N271 834 aa28.92■■■□□ 2.22
IMP4-213ENST00000473689 WNK3Q9BYP7 1800 aa28.92■■■□□ 2.22
IMP4-213ENST00000473689 FBLN1P23142 703 aa28.91■■■□□ 2.22
IMP4-213ENST00000473689 TNS2Q63HR2 1409 aa28.91■■■□□ 2.22
IMP4-213ENST00000473689 FYB1O15117 783 aa28.9■■■□□ 2.22
IMP4-213ENST00000473689 PCGF6Q9BYE7 350 aa28.9■■■□□ 2.22
IMP4-213ENST00000473689 MAP3K19Q56UN5 1328 aa28.9■■■□□ 2.22
IMP4-213ENST00000473689 CDCA8Q53HL2 280 aa28.89■■■□□ 2.22
IMP4-213ENST00000473689 NUP188Q5SRE5 1749 aa28.88■■■□□ 2.21
IMP4-213ENST00000473689 KCNQ2O43526 872 aa28.87■■■□□ 2.21
IMP4-213ENST00000473689 HOXC9P31274 260 aa28.87■■■□□ 2.21
IMP4-213ENST00000473689 SBF2Q86WG5 1849 aa28.86■■■□□ 2.21
IMP4-213ENST00000473689 LTN1O94822 1766 aa28.85■■■□□ 2.21
IMP4-213ENST00000473689 LTV1Q96GA3 475 aaPredicted RBP28.84■■■□□ 2.21
IMP4-213ENST00000473689 GGNBP2Q9H3C7 697 aa28.84■■■□□ 2.21
IMP4-213ENST00000473689 AMPHP49418 695 aa28.83■■■□□ 2.21
IMP4-213ENST00000473689 ANO8Q9HCE9 1232 aaPredicted RBP28.82■■■□□ 2.2
IMP4-213ENST00000473689 TXNRD1Q16881 649 aa28.81■■■□□ 2.2
IMP4-213ENST00000473689 CARD14Q9BXL6 1004 aa28.81■■■□□ 2.2
IMP4-213ENST00000473689 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
IMP4-213ENST00000473689 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
IMP4-213ENST00000473689 RRS1Q15050 365 aaKnown RBP28.79■■■□□ 2.2
IMP4-213ENST00000473689 ACSBG1Q96GR2 724 aa28.79■■■□□ 2.2
IMP4-213ENST00000473689 RTL1A6NKG5 1358 aa28.76■■■□□ 2.2
IMP4-213ENST00000473689 SPON1Q9HCB6 807 aa28.75■■■□□ 2.19
IMP4-213ENST00000473689 NBPF6Q5VWK0 638 aa28.73■■■□□ 2.19
IMP4-213ENST00000473689 DDX54Q8TDD1 881 aaKnown RBP28.73■■■□□ 2.19
IMP4-213ENST00000473689 NBPF4Q96M43 638 aa28.73■■■□□ 2.19
IMP4-213ENST00000473689 PDGFDQ9GZP0 370 aaPredicted RBP28.71■■■□□ 2.19
IMP4-213ENST00000473689 SLC15A2Q16348 729 aa28.7■■■□□ 2.18
IMP4-213ENST00000473689 HSP90AB2PQ58FF8 381 aa28.69■■■□□ 2.18
IMP4-213ENST00000473689 ZCRB1Q8TBF4 217 aaKnown RBP28.69■■■□□ 2.18
IMP4-213ENST00000473689 NHSQ6T4R5 1651 aa28.69■■■□□ 2.18
IMP4-213ENST00000473689 STK32BQ9NY57 414 aa28.68■■■□□ 2.18
IMP4-213ENST00000473689 FAM208AQ9UK61 1670 aaKnown RBP28.67■■■□□ 2.18
IMP4-213ENST00000473689 INSRP06213 1382 aa28.67■■■□□ 2.18
IMP4-213ENST00000473689 KIF24Q5T7B8 1368 aa28.67■■■□□ 2.18
IMP4-213ENST00000473689 NSD3Q9BZ95 1437 aa28.67■■■□□ 2.18
IMP4-213ENST00000473689 MEGF6O75095 1541 aa28.64■■■□□ 2.18
IMP4-213ENST00000473689 FLT4P35916 1363 aa28.63■■■□□ 2.17
IMP4-213ENST00000473689 USHBP1Q8N6Y0 703 aa28.63■■■□□ 2.17
IMP4-213ENST00000473689 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
IMP4-213ENST00000473689 LRRC4BQ9NT99 713 aa28.63■■■□□ 2.17
IMP4-213ENST00000473689 MYOM1P52179 1685 aa28.63■■■□□ 2.17
IMP4-213ENST00000473689 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
IMP4-213ENST00000473689 PRIM1P49642 420 aaKnown RBP28.62■■■□□ 2.17
IMP4-213ENST00000473689 EIF4G2P78344 907 aaKnown RBP eCLIP28.62■■■□□ 2.17
IMP4-213ENST00000473689 EMILIN1Q9Y6C2 1016 aa28.62■■■□□ 2.17
IMP4-213ENST00000473689 SMG6Q86US8 1419 aaKnown RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms