RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
SMG5-203ENST00000473643 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
SMG5-203ENST00000473643 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
SMG5-203ENST00000473643 THRAP3Q9Y2W1 955 aaKnown RBP12.44□□□□□ -0.42
SMG5-203ENST00000473643 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 A0A0G2JS52 829 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 MYT1Q01538 1121 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 NME9Q86XW9 330 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 BLMP54132 1417 aaPredicted RBP12.43□□□□□ -0.42
SMG5-203ENST00000473643 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
SMG5-203ENST00000473643 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
SMG5-203ENST00000473643 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
SMG5-203ENST00000473643 FYB1O15117 783 aa12.42□□□□□ -0.42
SMG5-203ENST00000473643 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
SMG5-203ENST00000473643 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
SMG5-203ENST00000473643 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
SMG5-203ENST00000473643 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
SMG5-203ENST00000473643 SOX12O15370 315 aa12.41□□□□□ -0.42
SMG5-203ENST00000473643 NSD2O96028 1365 aa12.41□□□□□ -0.42
SMG5-203ENST00000473643 FAM182BQ5T319 152 aa12.4□□□□□ -0.42
SMG5-203ENST00000473643 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
SMG5-203ENST00000473643 BRWD3Q6RI45 1802 aa12.39□□□□□ -0.43
SMG5-203ENST00000473643 CRB1P82279 1406 aa12.39□□□□□ -0.43
SMG5-203ENST00000473643 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
SMG5-203ENST00000473643 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 NFAT5O94916 1531 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
SMG5-203ENST00000473643 FAM196AQ6ZSG2 479 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 TOM1L2Q6ZVM7 507 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
SMG5-203ENST00000473643 RALBP1Q15311 655 aa12.37□□□□□ -0.43
SMG5-203ENST00000473643 PRKRIP1Q9H875 184 aaPredicted RBP12.37□□□□□ -0.43
SMG5-203ENST00000473643 COL18A1P39060 1754 aa12.37□□□□□ -0.43
SMG5-203ENST00000473643 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
SMG5-203ENST00000473643 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
SMG5-203ENST00000473643 ANP32CO43423 234 aa12.36□□□□□ -0.43
SMG5-203ENST00000473643 CC2D1BQ5T0F9 858 aaKnown RBP12.36□□□□□ -0.43
SMG5-203ENST00000473643 CDCA7Q9BWT1 371 aaPredicted RBP12.36□□□□□ -0.43
SMG5-203ENST00000473643 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
SMG5-203ENST00000473643 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
SMG5-203ENST00000473643 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
SMG5-203ENST00000473643 COG3Q96JB2 828 aa12.35□□□□□ -0.43
SMG5-203ENST00000473643 BAG6P46379 1132 aa12.34□□□□□ -0.43
SMG5-203ENST00000473643 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
SMG5-203ENST00000473643 IP6K1Q92551 441 aa12.34□□□□□ -0.43
SMG5-203ENST00000473643 ERBB3P21860 1342 aa12.34□□□□□ -0.43
SMG5-203ENST00000473643 ABCC6O95255 1503 aa12.33□□□□□ -0.44
SMG5-203ENST00000473643 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
SMG5-203ENST00000473643 TRIM37O94972 964 aa12.33□□□□□ -0.44
SMG5-203ENST00000473643 DDB1Q16531 1140 aa12.33□□□□□ -0.44
SMG5-203ENST00000473643 FBLN1P23142 703 aa12.32□□□□□ -0.44
SMG5-203ENST00000473643 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
SMG5-203ENST00000473643 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
SMG5-203ENST00000473643 MAP3K19Q56UN5 1328 aa12.32□□□□□ -0.44
SMG5-203ENST00000473643 DISP2A7MBM2 1401 aa12.31□□□□□ -0.44
SMG5-203ENST00000473643 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
SMG5-203ENST00000473643 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
SMG5-203ENST00000473643 EXOC5O00471 708 aa12.3□□□□□ -0.44
SMG5-203ENST00000473643 PPP2R1AP30153 589 aa12.3□□□□□ -0.44
SMG5-203ENST00000473643 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
SMG5-203ENST00000473643 APBA3O96018 575 aa12.29□□□□□ -0.44
SMG5-203ENST00000473643 HOXC9P31274 260 aa12.29□□□□□ -0.44
SMG5-203ENST00000473643 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
SMG5-203ENST00000473643 BCL9O00512 1426 aa12.28□□□□□ -0.44
SMG5-203ENST00000473643 AMPHP49418 695 aa12.28□□□□□ -0.44
SMG5-203ENST00000473643 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
SMG5-203ENST00000473643 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
SMG5-203ENST00000473643 MIER1Q8N108 512 aa12.28□□□□□ -0.44
SMG5-203ENST00000473643 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
SMG5-203ENST00000473643 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
SMG5-203ENST00000473643 IL2RBP14784 551 aa12.27□□□□□ -0.45
SMG5-203ENST00000473643 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
SMG5-203ENST00000473643 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
SMG5-203ENST00000473643 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
SMG5-203ENST00000473643 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
SMG5-203ENST00000473643 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
SMG5-203ENST00000473643 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
SMG5-203ENST00000473643 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
SMG5-203ENST00000473643 INSRP06213 1382 aa12.26□□□□□ -0.45
SMG5-203ENST00000473643 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
SMG5-203ENST00000473643 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 PLSCR1O15162 318 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 MTHFSP49914 203 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
SMG5-203ENST00000473643 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
SMG5-203ENST00000473643 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
SMG5-203ENST00000473643 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 NBPF6Q5VWK0 638 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 NBPF4Q96M43 638 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 EMILIN1Q9Y6C2 1016 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 LTN1O94822 1766 aa12.23□□□□□ -0.45
SMG5-203ENST00000473643 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms