RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 PHRF1Q9P1Y6 1649 aaKnown RBP12.97□□□□□ -0.33
DUBR-203ENST00000473550 CCDC184Q52MB2 194 aa12.96□□□□□ -0.33
DUBR-203ENST00000473550 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
DUBR-203ENST00000473550 ZRANB1Q9UGI0 708 aa12.96□□□□□ -0.33
DUBR-203ENST00000473550 FLT4P35916 1363 aa12.95□□□□□ -0.34
DUBR-203ENST00000473550 ABCC6O95255 1503 aa12.95□□□□□ -0.34
DUBR-203ENST00000473550 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
DUBR-203ENST00000473550 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
DUBR-203ENST00000473550 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
DUBR-203ENST00000473550 NFAT5O94916 1531 aa12.94□□□□□ -0.34
DUBR-203ENST00000473550 UBAP1LF5GYI3 381 aa12.94□□□□□ -0.34
DUBR-203ENST00000473550 GCP02774 474 aa12.94□□□□□ -0.34
DUBR-203ENST00000473550 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
DUBR-203ENST00000473550 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
DUBR-203ENST00000473550 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
DUBR-203ENST00000473550 AMPHP49418 695 aa12.93□□□□□ -0.34
DUBR-203ENST00000473550 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
DUBR-203ENST00000473550 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
DUBR-203ENST00000473550 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
DUBR-203ENST00000473550 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
DUBR-203ENST00000473550 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
DUBR-203ENST00000473550 BLMP54132 1417 aaPredicted RBP12.91□□□□□ -0.34
DUBR-203ENST00000473550 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
DUBR-203ENST00000473550 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
DUBR-203ENST00000473550 LTN1O94822 1766 aa12.91□□□□□ -0.34
DUBR-203ENST00000473550 CPDO75976 1380 aa12.91□□□□□ -0.34
DUBR-203ENST00000473550 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
DUBR-203ENST00000473550 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
DUBR-203ENST00000473550 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
DUBR-203ENST00000473550 IP6K1Q92551 441 aa12.9□□□□□ -0.34
DUBR-203ENST00000473550 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
DUBR-203ENST00000473550 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
DUBR-203ENST00000473550 NEFMP07197 916 aa12.89□□□□□ -0.35
DUBR-203ENST00000473550 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
DUBR-203ENST00000473550 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
DUBR-203ENST00000473550 FCHSD2O94868 740 aa12.88□□□□□ -0.35
DUBR-203ENST00000473550 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
DUBR-203ENST00000473550 U2AF1L5P0DN76 240 aaPredicted RBP12.88□□□□□ -0.35
DUBR-203ENST00000473550 HOXC9P31274 260 aa12.88□□□□□ -0.35
DUBR-203ENST00000473550 IL13P35225 146 aa12.88□□□□□ -0.35
DUBR-203ENST00000473550 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
DUBR-203ENST00000473550 U2AF1Q01081 240 aaKnown RBP eCLIP12.88□□□□□ -0.35
DUBR-203ENST00000473550 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
DUBR-203ENST00000473550 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
DUBR-203ENST00000473550 SOX12O15370 315 aa12.87□□□□□ -0.35
DUBR-203ENST00000473550 PIP4K2BP78356 416 aa12.87□□□□□ -0.35
DUBR-203ENST00000473550 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
DUBR-203ENST00000473550 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
DUBR-203ENST00000473550 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
DUBR-203ENST00000473550 FBLN1P23142 703 aa12.86□□□□□ -0.35
DUBR-203ENST00000473550 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
DUBR-203ENST00000473550 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
DUBR-203ENST00000473550 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
DUBR-203ENST00000473550 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
DUBR-203ENST00000473550 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
DUBR-203ENST00000473550 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
DUBR-203ENST00000473550 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
DUBR-203ENST00000473550 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
DUBR-203ENST00000473550 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
DUBR-203ENST00000473550 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
DUBR-203ENST00000473550 KDRP35968 1356 aa12.82□□□□□ -0.36
DUBR-203ENST00000473550 JCADQ9P266 1359 aa12.82□□□□□ -0.36
DUBR-203ENST00000473550 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
DUBR-203ENST00000473550 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
DUBR-203ENST00000473550 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
DUBR-203ENST00000473550 KIAA0232Q92628 1395 aa12.81□□□□□ -0.36
DUBR-203ENST00000473550 COL18A1P39060 1754 aa12.81□□□□□ -0.36
DUBR-203ENST00000473550 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
DUBR-203ENST00000473550 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
DUBR-203ENST00000473550 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
DUBR-203ENST00000473550 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 ANKRD24Q8TF21 1146 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 ERBB3P21860 1342 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
DUBR-203ENST00000473550 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
DUBR-203ENST00000473550 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
DUBR-203ENST00000473550 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
DUBR-203ENST00000473550 EYA1Q99502 592 aa12.79□□□□□ -0.36
DUBR-203ENST00000473550 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
DUBR-203ENST00000473550 LMOD3Q0VAK6 560 aa12.78□□□□□ -0.36
DUBR-203ENST00000473550 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
DUBR-203ENST00000473550 APAF1O14727 1248 aa12.77□□□□□ -0.37
DUBR-203ENST00000473550 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
DUBR-203ENST00000473550 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
DUBR-203ENST00000473550 HMOX1P09601 288 aa12.76□□□□□ -0.37
DUBR-203ENST00000473550 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
DUBR-203ENST00000473550 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
DUBR-203ENST00000473550 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
DUBR-203ENST00000473550 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
DUBR-203ENST00000473550 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
DUBR-203ENST00000473550 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
DUBR-203ENST00000473550 CSB-PGBD3P0DP91 1061 aa12.75□□□□□ -0.37
DUBR-203ENST00000473550 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
DUBR-203ENST00000473550 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
DUBR-203ENST00000473550 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
DUBR-203ENST00000473550 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms