RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
BBX-223ENST00000473542 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.89
BBX-223ENST00000473542 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
BBX-223ENST00000473542 CBLBQ13191 982 aa9.51□□□□□ -0.89
BBX-223ENST00000473542 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
BBX-223ENST00000473542 CCDC116Q8IYX3 515 aa9.51□□□□□ -0.89
BBX-223ENST00000473542 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
BBX-223ENST00000473542 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
BBX-223ENST00000473542 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
BBX-223ENST00000473542 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
BBX-223ENST00000473542 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
BBX-223ENST00000473542 FIGNL2A6NMB9 653 aa9.49□□□□□ -0.89
BBX-223ENST00000473542 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
BBX-223ENST00000473542 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
BBX-223ENST00000473542 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
BBX-223ENST00000473542 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
BBX-223ENST00000473542 GSK3AP49840 483 aa9.48□□□□□ -0.89
BBX-223ENST00000473542 PPP1R26Q5T8A7 1209 aaPredicted RBP9.48□□□□□ -0.89
BBX-223ENST00000473542 PTSQ03393 145 aa9.47□□□□□ -0.89
BBX-223ENST00000473542 C14orf37Q86TY3 774 aa9.47□□□□□ -0.89
BBX-223ENST00000473542 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
BBX-223ENST00000473542 CNTNAP3BQ96NU0 1288 aa9.46□□□□□ -0.9
BBX-223ENST00000473542 CNTNAP3Q9BZ76 1288 aa9.46□□□□□ -0.9
BBX-223ENST00000473542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
BBX-223ENST00000473542 Q6ZVU0 165 aa9.45□□□□□ -0.9
BBX-223ENST00000473542 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
BBX-223ENST00000473542 LOC100996750A0A140TA64 210 aa9.43□□□□□ -0.9
BBX-223ENST00000473542 SPINT1O43278 529 aa9.43□□□□□ -0.9
BBX-223ENST00000473542 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
BBX-223ENST00000473542 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
BBX-223ENST00000473542 ARHGAP9Q9BRR9 750 aa9.43□□□□□ -0.9
BBX-223ENST00000473542 KRTAP4-6Q9BYQ5 205 aa9.43□□□□□ -0.9
BBX-223ENST00000473542 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
BBX-223ENST00000473542 NR6A1Q15406 480 aa9.42□□□□□ -0.9
BBX-223ENST00000473542 RNFT1Q5M7Z0 435 aa9.42□□□□□ -0.9
BBX-223ENST00000473542 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
BBX-223ENST00000473542 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
BBX-223ENST00000473542 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
BBX-223ENST00000473542 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
BBX-223ENST00000473542 CCDC155Q8N6L0 562 aa9.41□□□□□ -0.9
BBX-223ENST00000473542 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
BBX-223ENST00000473542 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
BBX-223ENST00000473542 CTSOP43234 321 aaPredicted RBP9.4□□□□□ -0.9
BBX-223ENST00000473542 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
BBX-223ENST00000473542 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.9
BBX-223ENST00000473542 RELBQ01201 579 aa9.39□□□□□ -0.91
BBX-223ENST00000473542 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
BBX-223ENST00000473542 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
BBX-223ENST00000473542 SLC35F4A4IF30 521 aa9.38□□□□□ -0.91
BBX-223ENST00000473542 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
BBX-223ENST00000473542 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
BBX-223ENST00000473542 NANOS1Q8WY41 292 aaKnown RBP9.38□□□□□ -0.91
BBX-223ENST00000473542 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
BBX-223ENST00000473542 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
BBX-223ENST00000473542 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
BBX-223ENST00000473542 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
BBX-223ENST00000473542 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
BBX-223ENST00000473542 TMPRSS4Q9NRS4 437 aa9.37□□□□□ -0.91
BBX-223ENST00000473542 VWA5B2Q8N398 1253 aa9.36□□□□□ -0.91
BBX-223ENST00000473542 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
BBX-223ENST00000473542 ITGA6P23229 1130 aa9.35□□□□□ -0.91
BBX-223ENST00000473542 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
BBX-223ENST00000473542 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
BBX-223ENST00000473542 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
BBX-223ENST00000473542 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
BBX-223ENST00000473542 CDC14CA4D256 554 aa9.34□□□□□ -0.91
BBX-223ENST00000473542 RAB15P59190 212 aa9.34□□□□□ -0.91
BBX-223ENST00000473542 RASSF7Q02833 373 aa9.34□□□□□ -0.91
BBX-223ENST00000473542 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
BBX-223ENST00000473542 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
BBX-223ENST00000473542 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 ZNF784Q8NCA9 323 aaPredicted RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 CDV3Q9UKY7 258 aaKnown RBP9.33□□□□□ -0.92
BBX-223ENST00000473542 GDF11O95390 407 aa9.32□□□□□ -0.92
BBX-223ENST00000473542 ADD1P35611 737 aaKnown RBP9.32□□□□□ -0.92
BBX-223ENST00000473542 TMEM151AQ8N4L1 468 aa9.32□□□□□ -0.92
BBX-223ENST00000473542 SVOPQ8N4V2 548 aa9.32□□□□□ -0.92
BBX-223ENST00000473542 KDF1Q8NAX2 398 aaPredicted RBP9.32□□□□□ -0.92
BBX-223ENST00000473542 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
BBX-223ENST00000473542 AP1G2O75843 785 aa9.31□□□□□ -0.92
BBX-223ENST00000473542 PTK2Q05397 1052 aa9.31□□□□□ -0.92
BBX-223ENST00000473542 FLIIQ13045 1269 aa9.31□□□□□ -0.92
BBX-223ENST00000473542 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
BBX-223ENST00000473542 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
BBX-223ENST00000473542 LILRA1O75019 489 aa9.3□□□□□ -0.92
BBX-223ENST00000473542 ARHGEF15O94989 841 aa9.3□□□□□ -0.92
BBX-223ENST00000473542 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
BBX-223ENST00000473542 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
BBX-223ENST00000473542 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
BBX-223ENST00000473542 CUEDC1Q9NWM3 386 aaPredicted RBP9.29□□□□□ -0.92
BBX-223ENST00000473542 ADH1AP07327 375 aa9.28□□□□□ -0.92
BBX-223ENST00000473542 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
BBX-223ENST00000473542 GPSM3Q9Y4H4 160 aa9.27□□□□□ -0.93
BBX-223ENST00000473542 USP17L8P0C7I0 530 aa9.26□□□□□ -0.93
BBX-223ENST00000473542 NBPF20Q3BBV1 942 aa9.26□□□□□ -0.93
BBX-223ENST00000473542 ZMYND15Q9H091 742 aa9.26□□□□□ -0.93
BBX-223ENST00000473542 IRS1P35568 1242 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms