RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 RGPD5Q99666 1765 aa31.56■■■□□ 2.64
PTP4A1-203ENST00000473334 ABCC6O95255 1503 aa31.55■■■□□ 2.64
PTP4A1-203ENST00000473334 CDCA8Q53HL2 280 aa31.55■■■□□ 2.64
PTP4A1-203ENST00000473334 TCP11L2Q8N4U5 519 aa31.55■■■□□ 2.64
PTP4A1-203ENST00000473334 ANKRD36BQ8N2N9 1353 aa31.55■■■□□ 2.64
PTP4A1-203ENST00000473334 THRAP3Q9Y2W1 955 aaKnown RBP31.54■■■□□ 2.64
PTP4A1-203ENST00000473334 OVOS2A0A0J9YW53 1432 aa31.53■■■□□ 2.64
PTP4A1-203ENST00000473334 OVOS2Q6IE36 1432 aa31.53■■■□□ 2.64
PTP4A1-203ENST00000473334 AXIN2Q9Y2T1 843 aa31.53■■■□□ 2.64
PTP4A1-203ENST00000473334 LTN1O94822 1766 aa31.51■■■□□ 2.64
PTP4A1-203ENST00000473334 WDR17Q8IZU2 1322 aa31.49■■■□□ 2.63
PTP4A1-203ENST00000473334 SF3B2Q13435 895 aaKnown RBP31.49■■■□□ 2.63
PTP4A1-203ENST00000473334 PARP4Q9UKK3 1724 aaKnown RBP31.49■■■□□ 2.63
PTP4A1-203ENST00000473334 FAM182BQ5T319 152 aa31.47■■■□□ 2.63
PTP4A1-203ENST00000473334 TOM1L2Q6ZVM7 507 aa31.47■■■□□ 2.63
PTP4A1-203ENST00000473334 MYOM1P52179 1685 aa31.47■■■□□ 2.63
PTP4A1-203ENST00000473334 RGPD1P0DJD0 1748 aa31.46■■■□□ 2.63
PTP4A1-203ENST00000473334 WNK3Q9BYP7 1800 aa31.45■■■□□ 2.63
PTP4A1-203ENST00000473334 CSB-PGBD3P0DP91 1061 aa31.42■■■□□ 2.62
PTP4A1-203ENST00000473334 PDE3BQ13370 1112 aa31.42■■■□□ 2.62
PTP4A1-203ENST00000473334 COG3Q96JB2 828 aa31.42■■■□□ 2.62
PTP4A1-203ENST00000473334 DEFB132Q7Z7B7 95 aa31.41■■■□□ 2.62
PTP4A1-203ENST00000473334 LRRC37A3O60309 1634 aa31.4■■■□□ 2.62
PTP4A1-203ENST00000473334 EIF4G2P78344 907 aaKnown RBP eCLIP31.4■■■□□ 2.62
PTP4A1-203ENST00000473334 TNS1Q9HBL0 1735 aaKnown RBP31.39■■■□□ 2.62
PTP4A1-203ENST00000473334 FAM196AQ6ZSG2 479 aa31.39■■■□□ 2.62
PTP4A1-203ENST00000473334 CARD10Q9BWT7 1032 aa31.39■■■□□ 2.62
PTP4A1-203ENST00000473334 KIF20BQ96Q89 1820 aa31.38■■■□□ 2.61
PTP4A1-203ENST00000473334 ERBB3P21860 1342 aa31.36■■■□□ 2.61
PTP4A1-203ENST00000473334 BAG6P46379 1132 aa31.36■■■□□ 2.61
PTP4A1-203ENST00000473334 HSPA5P11021 654 aaKnown RBP31.35■■■□□ 2.61
PTP4A1-203ENST00000473334 CCDC7Q96M83 1385 aa31.34■■■□□ 2.61
PTP4A1-203ENST00000473334 CDCA7Q9BWT1 371 aaPredicted RBP31.34■■■□□ 2.61
PTP4A1-203ENST00000473334 FYB1O15117 783 aa31.33■■■□□ 2.61
PTP4A1-203ENST00000473334 DISP2A7MBM2 1401 aa31.32■■■□□ 2.6
PTP4A1-203ENST00000473334 DDB1Q16531 1140 aa31.31■■■□□ 2.6
PTP4A1-203ENST00000473334 GGNBP2Q9H3C7 697 aa31.31■■■□□ 2.6
PTP4A1-203ENST00000473334 ANKRD24Q8TF21 1146 aa31.3■■■□□ 2.6
PTP4A1-203ENST00000473334 IP6K1Q92551 441 aa31.3■■■□□ 2.6
PTP4A1-203ENST00000473334 NSD3Q9BZ95 1437 aa31.3■■■□□ 2.6
PTP4A1-203ENST00000473334 PEAK1Q9H792 1746 aa31.29■■■□□ 2.6
PTP4A1-203ENST00000473334 TRIM37O94972 964 aa31.29■■■□□ 2.6
PTP4A1-203ENST00000473334 OVOS2A0A0G2JMS6 1433 aa31.29■■■□□ 2.6
PTP4A1-203ENST00000473334 FAM208AQ9UK61 1670 aaKnown RBP31.29■■■□□ 2.6
PTP4A1-203ENST00000473334 MAP3K19Q56UN5 1328 aa31.28■■■□□ 2.6
PTP4A1-203ENST00000473334 CARD14Q9BXL6 1004 aa31.28■■■□□ 2.6
PTP4A1-203ENST00000473334 C11orf95C9JLR9 678 aaPredicted RBP31.27■■■□□ 2.6
PTP4A1-203ENST00000473334 POLR3GLQ9BT43 218 aa31.27■■■□□ 2.6
PTP4A1-203ENST00000473334 NLRP2Q9NX02 1062 aa31.27■■■□□ 2.6
PTP4A1-203ENST00000473334 FBLN1P23142 703 aa31.25■■■□□ 2.59
PTP4A1-203ENST00000473334 EN1Q05925 392 aaPredicted RBP31.25■■■□□ 2.59
PTP4A1-203ENST00000473334 RTL1A6NKG5 1358 aa31.23■■■□□ 2.59
PTP4A1-203ENST00000473334 HOXC9P31274 260 aa31.23■■■□□ 2.59
PTP4A1-203ENST00000473334 AMPHP49418 695 aa31.23■■■□□ 2.59
PTP4A1-203ENST00000473334 SBF2Q86WG5 1849 aa31.22■■■□□ 2.59
PTP4A1-203ENST00000473334 TNS2Q63HR2 1409 aa31.22■■■□□ 2.59
PTP4A1-203ENST00000473334 EXOC5O00471 708 aa31.19■■■□□ 2.58
PTP4A1-203ENST00000473334 APBA3O96018 575 aa31.19■■■□□ 2.58
PTP4A1-203ENST00000473334 RRS1Q15050 365 aaKnown RBP31.19■■■□□ 2.58
PTP4A1-203ENST00000473334 LTV1Q96GA3 475 aaPredicted RBP31.19■■■□□ 2.58
PTP4A1-203ENST00000473334 MARCH10Q8NA82 808 aaPredicted RBP31.18■■■□□ 2.58
PTP4A1-203ENST00000473334 IL2RBP14784 551 aa31.17■■■□□ 2.58
PTP4A1-203ENST00000473334 CGNL1Q0VF96 1302 aa31.17■■■□□ 2.58
PTP4A1-203ENST00000473334 BCL9O00512 1426 aa31.16■■■□□ 2.58
PTP4A1-203ENST00000473334 EZH2Q15910 746 aaKnown RBP31.16■■■□□ 2.58
PTP4A1-203ENST00000473334 PARD3Q8TEW0 1356 aa31.16■■■□□ 2.58
PTP4A1-203ENST00000473334 CAMKK2Q96RR4 588 aa31.15■■■□□ 2.58
PTP4A1-203ENST00000473334 RGPD2P0DJD1 1756 aa31.15■■■□□ 2.58
PTP4A1-203ENST00000473334 RREB1Q92766 1687 aa31.13■■■□□ 2.57
PTP4A1-203ENST00000473334 ANKRD26Q9UPS8 1709 aa31.13■■■□□ 2.57
PTP4A1-203ENST00000473334 KIF24Q5T7B8 1368 aa31.13■■■□□ 2.57
PTP4A1-203ENST00000473334 FLT4P35916 1363 aa31.11■■■□□ 2.57
PTP4A1-203ENST00000473334 SMG6Q86US8 1419 aaKnown RBP31.1■■■□□ 2.57
PTP4A1-203ENST00000473334 RGPD3A6NKT7 1758 aaPredicted RBP31.09■■■□□ 2.57
PTP4A1-203ENST00000473334 RGPD4Q7Z3J3 1758 aa31.09■■■□□ 2.57
PTP4A1-203ENST00000473334 INSRP06213 1382 aa31.08■■■□□ 2.57
PTP4A1-203ENST00000473334 BCL11BQ9C0K0 894 aaPredicted RBP31.08■■■□□ 2.57
PTP4A1-203ENST00000473334 PANK3Q9H999 370 aa31.08■■■□□ 2.57
PTP4A1-203ENST00000473334 NUP188Q5SRE5 1749 aa31.07■■■□□ 2.56
PTP4A1-203ENST00000473334 MAP2P11137 1827 aaKnown RBP31.05■■■□□ 2.56
PTP4A1-203ENST00000473334 HSP90AB2PQ58FF8 381 aa31.04■■■□□ 2.56
PTP4A1-203ENST00000473334 EMILIN1Q9Y6C2 1016 aa31.04■■■□□ 2.56
PTP4A1-203ENST00000473334 NHSQ6T4R5 1651 aa31.03■■■□□ 2.56
PTP4A1-203ENST00000473334 NBPF6Q5VWK0 638 aa31.02■■■□□ 2.56
PTP4A1-203ENST00000473334 PTF1AQ7RTS3 328 aa31.02■■■□□ 2.56
PTP4A1-203ENST00000473334 NBPF4Q96M43 638 aa31.02■■■□□ 2.56
PTP4A1-203ENST00000473334 PSDA5PKW4 1024 aaPredicted RBP31.01■■■□□ 2.55
PTP4A1-203ENST00000473334 PLSCR1O15162 318 aa31.01■■■□□ 2.55
PTP4A1-203ENST00000473334 KIF7Q2M1P5 1343 aa31■■■□□ 2.55
PTP4A1-203ENST00000473334 MEGF6O75095 1541 aa31■■■□□ 2.55
PTP4A1-203ENST00000473334 NSD2O96028 1365 aa31■■■□□ 2.55
PTP4A1-203ENST00000473334 SRCAPQ6ZRS2 3230 aa30.99■■■□□ 2.55
PTP4A1-203ENST00000473334 SHANK3Q9BYB0 1731 aa30.98■■■□□ 2.55
PTP4A1-203ENST00000473334 PPM1GO15355 546 aaPredicted RBP30.97■■■□□ 2.55
PTP4A1-203ENST00000473334 R3HDM1Q15032 1099 aaKnown RBP30.97■■■□□ 2.55
PTP4A1-203ENST00000473334 USHBP1Q8N6Y0 703 aa30.97■■■□□ 2.55
PTP4A1-203ENST00000473334 DDX54Q8TDD1 881 aaKnown RBP30.95■■■□□ 2.55
PTP4A1-203ENST00000473334 ACSBG1Q96GR2 724 aa30.95■■■□□ 2.55
PTP4A1-203ENST00000473334 POLKQ9UBT6 870 aa30.95■■■□□ 2.55
PTP4A1-203ENST00000473334 WASHC2AQ641Q2 1341 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms