RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 FSHRP23945 695 aa9.1□□□□□ -0.95
CCDC66-215ENST00000473322 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
CCDC66-215ENST00000473322 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
CCDC66-215ENST00000473322 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
CCDC66-215ENST00000473322 NBPF20Q3BBV1 942 aa9.09□□□□□ -0.95
CCDC66-215ENST00000473322 KCTD15Q96SI1 283 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-215ENST00000473322 GPR37L1O60883 481 aa9.08□□□□□ -0.96
CCDC66-215ENST00000473322 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
CCDC66-215ENST00000473322 EMILIN1Q9Y6C2 1016 aa9.08□□□□□ -0.96
CCDC66-215ENST00000473322 ZIC2O95409 532 aaPredicted RBP9.07□□□□□ -0.96
CCDC66-215ENST00000473322 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
CCDC66-215ENST00000473322 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
CCDC66-215ENST00000473322 ITPKCQ96DU7 683 aa9.07□□□□□ -0.96
CCDC66-215ENST00000473322 TRIM47Q96LD4 638 aa9.07□□□□□ -0.96
CCDC66-215ENST00000473322 PRM3Q9NNZ6 103 aa9.07□□□□□ -0.96
CCDC66-215ENST00000473322 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
CCDC66-215ENST00000473322 FBXO45P0C2W1 286 aa9.06□□□□□ -0.96
CCDC66-215ENST00000473322 DHX9Q08211 1270 aaKnown RBP9.06□□□□□ -0.96
CCDC66-215ENST00000473322 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
CCDC66-215ENST00000473322 MCCD1P59942 119 aaPredicted RBP9.05□□□□□ -0.96
CCDC66-215ENST00000473322 NR1H3Q13133 447 aa9.05□□□□□ -0.96
CCDC66-215ENST00000473322 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
CCDC66-215ENST00000473322 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
CCDC66-215ENST00000473322 ESPNB1AK53 854 aa9.04□□□□□ -0.96
CCDC66-215ENST00000473322 BMP1P13497 986 aa9.04□□□□□ -0.96
CCDC66-215ENST00000473322 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
CCDC66-215ENST00000473322 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
CCDC66-215ENST00000473322 MRPL14Q6P1L8 145 aaKnown RBP9.03□□□□□ -0.96
CCDC66-215ENST00000473322 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
CCDC66-215ENST00000473322 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
CCDC66-215ENST00000473322 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
CCDC66-215ENST00000473322 MCM6Q14566 821 aa9.02□□□□□ -0.97
CCDC66-215ENST00000473322 CCDC125Q86Z20 511 aa9.02□□□□□ -0.97
CCDC66-215ENST00000473322 MEIOBQ8N635 442 aa9.02□□□□□ -0.97
CCDC66-215ENST00000473322 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
CCDC66-215ENST00000473322 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.97
CCDC66-215ENST00000473322 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
CCDC66-215ENST00000473322 SCARF1Q14162 830 aa9.01□□□□□ -0.97
CCDC66-215ENST00000473322 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
CCDC66-215ENST00000473322 Q6ZVU0 165 aa9□□□□□ -0.97
CCDC66-215ENST00000473322 ZFP42Q96MM3 310 aa9□□□□□ -0.97
CCDC66-215ENST00000473322 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
CCDC66-215ENST00000473322 UPP2O95045 317 aa8.99□□□□□ -0.97
CCDC66-215ENST00000473322 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-215ENST00000473322 TSEN34Q9BSV6 310 aaKnown RBP8.99□□□□□ -0.97
CCDC66-215ENST00000473322 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
CCDC66-215ENST00000473322 IRF5Q13568 498 aa8.98□□□□□ -0.97
CCDC66-215ENST00000473322 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
CCDC66-215ENST00000473322 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
CCDC66-215ENST00000473322 FLIIQ13045 1269 aa8.97□□□□□ -0.97
CCDC66-215ENST00000473322 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
CCDC66-215ENST00000473322 PURBQ96QR8 312 aaKnown RBP8.97□□□□□ -0.97
CCDC66-215ENST00000473322 GIGYF1O75420 1035 aaPredicted RBP8.96□□□□□ -0.98
CCDC66-215ENST00000473322 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.98
CCDC66-215ENST00000473322 ZNF784Q8NCA9 323 aaPredicted RBP8.95□□□□□ -0.98
CCDC66-215ENST00000473322 LILRA1O75019 489 aa8.94□□□□□ -0.98
CCDC66-215ENST00000473322 BMP2P12643 396 aa8.94□□□□□ -0.98
CCDC66-215ENST00000473322 EIF4G2P78344 907 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC66-215ENST00000473322 CBLBQ13191 982 aa8.94□□□□□ -0.98
CCDC66-215ENST00000473322 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
CCDC66-215ENST00000473322 TMPRSS4Q9NRS4 437 aa8.94□□□□□ -0.98
CCDC66-215ENST00000473322 RAB15P59190 212 aa8.93□□□□□ -0.98
CCDC66-215ENST00000473322 C6orf118Q5T5N4 469 aa8.93□□□□□ -0.98
CCDC66-215ENST00000473322 SPINT1O43278 529 aa8.92□□□□□ -0.98
CCDC66-215ENST00000473322 ABL2P42684 1182 aa8.92□□□□□ -0.98
CCDC66-215ENST00000473322 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
CCDC66-215ENST00000473322 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
CCDC66-215ENST00000473322 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
CCDC66-215ENST00000473322 ADH1AP07327 375 aa8.9□□□□□ -0.98
CCDC66-215ENST00000473322 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
CCDC66-215ENST00000473322 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
CCDC66-215ENST00000473322 NPAS3Q8IXF0 933 aa8.9□□□□□ -0.98
CCDC66-215ENST00000473322 SOX11P35716 441 aa8.89□□□□□ -0.99
CCDC66-215ENST00000473322 ERVK-9P63128 1117 aa8.89□□□□□ -0.99
CCDC66-215ENST00000473322 VAC14Q08AM6 782 aa8.89□□□□□ -0.99
CCDC66-215ENST00000473322 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
CCDC66-215ENST00000473322 MAN1A2O60476 641 aa8.88□□□□□ -0.99
CCDC66-215ENST00000473322 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
CCDC66-215ENST00000473322 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
CCDC66-215ENST00000473322 KDF1Q8NAX2 398 aaPredicted RBP8.88□□□□□ -0.99
CCDC66-215ENST00000473322 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
CCDC66-215ENST00000473322 CYLDQ9NQC7 956 aa8.88□□□□□ -0.99
CCDC66-215ENST00000473322 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
CCDC66-215ENST00000473322 TTLL8A6PVC2 850 aa8.87□□□□□ -0.99
CCDC66-215ENST00000473322 RAD21O60216 631 aa8.87□□□□□ -0.99
CCDC66-215ENST00000473322 NFX1Q12986 1120 aaKnown RBP8.87□□□□□ -0.99
CCDC66-215ENST00000473322 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
CCDC66-215ENST00000473322 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
CCDC66-215ENST00000473322 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
CCDC66-215ENST00000473322 PTGIRP43119 386 aa8.86□□□□□ -0.99
CCDC66-215ENST00000473322 RELBQ01201 579 aa8.86□□□□□ -0.99
CCDC66-215ENST00000473322 DNMT3LQ9UJW3 386 aa8.86□□□□□ -0.99
CCDC66-215ENST00000473322 PCDHB11Q9Y5F2 797 aa8.86□□□□□ -0.99
CCDC66-215ENST00000473322 WFS1O76024 890 aa8.85□□□□□ -0.99
CCDC66-215ENST00000473322 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.99
CCDC66-215ENST00000473322 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
CCDC66-215ENST00000473322 SOBPA7XYQ1 873 aa8.84□□□□□ -0.99
CCDC66-215ENST00000473322 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
CCDC66-215ENST00000473322 SEMA3FQ13275 785 aa8.84□□□□□ -0.99
CCDC66-215ENST00000473322 SLFNL1Q499Z3 407 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms