RNA–Protein interactions for RNA: ENST00000473002.1

ITGA4-206, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-206ENST00000473002 ITPKCQ96DU7 683 aa10.22□□□□□ -0.77
ITGA4-206ENST00000473002 ZFAND3Q9H8U3 227 aa10.22□□□□□ -0.77
ITGA4-206ENST00000473002 SNRPBP14678 240 aaKnown RBP10.21□□□□□ -0.77
ITGA4-206ENST00000473002 KIFC2Q96AC6 838 aa10.21□□□□□ -0.77
ITGA4-206ENST00000473002 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
ITGA4-206ENST00000473002 CCDC116Q8IYX3 515 aa10.19□□□□□ -0.78
ITGA4-206ENST00000473002 KCTD15Q96SI1 283 aaPredicted RBP10.19□□□□□ -0.78
ITGA4-206ENST00000473002 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
ITGA4-206ENST00000473002 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
ITGA4-206ENST00000473002 SOCS7O14512 581 aa10.17□□□□□ -0.78
ITGA4-206ENST00000473002 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
ITGA4-206ENST00000473002 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
ITGA4-206ENST00000473002 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
ITGA4-206ENST00000473002 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
ITGA4-206ENST00000473002 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
ITGA4-206ENST00000473002 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
ITGA4-206ENST00000473002 ZBBXA8MT70 800 aa10.14□□□□□ -0.79
ITGA4-206ENST00000473002 SCARF1Q14162 830 aa10.14□□□□□ -0.79
ITGA4-206ENST00000473002 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
ITGA4-206ENST00000473002 INTS6LQ5JSJ4 861 aaKnown RBP10.14□□□□□ -0.79
ITGA4-206ENST00000473002 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
ITGA4-206ENST00000473002 MEIOBQ8N635 442 aa10.14□□□□□ -0.79
ITGA4-206ENST00000473002 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
ITGA4-206ENST00000473002 NDUFB9Q9Y6M9 179 aa10.13□□□□□ -0.79
ITGA4-206ENST00000473002 APBB1O00213 710 aa10.12□□□□□ -0.79
ITGA4-206ENST00000473002 GPR37L1O60883 481 aa10.12□□□□□ -0.79
ITGA4-206ENST00000473002 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
ITGA4-206ENST00000473002 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
ITGA4-206ENST00000473002 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
ITGA4-206ENST00000473002 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
ITGA4-206ENST00000473002 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
ITGA4-206ENST00000473002 UPP2O95045 317 aa10.09□□□□□ -0.79
ITGA4-206ENST00000473002 RAB15P59190 212 aa10.09□□□□□ -0.79
ITGA4-206ENST00000473002 CBLBQ13191 982 aa10.09□□□□□ -0.79
ITGA4-206ENST00000473002 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
ITGA4-206ENST00000473002 PCDHB9Q9Y5E1 797 aa10.09□□□□□ -0.79
ITGA4-206ENST00000473002 ESPNB1AK53 854 aa10.08□□□□□ -0.8
ITGA4-206ENST00000473002 BMP2P12643 396 aa10.08□□□□□ -0.8
ITGA4-206ENST00000473002 NR1H3Q13133 447 aa10.08□□□□□ -0.8
ITGA4-206ENST00000473002 Q6ZVU0 165 aa10.07□□□□□ -0.8
ITGA4-206ENST00000473002 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
ITGA4-206ENST00000473002 TMPRSS4Q9NRS4 437 aa10.07□□□□□ -0.8
ITGA4-206ENST00000473002 ERVH48-1M5A8F1 160 aa10.06□□□□□ -0.8
ITGA4-206ENST00000473002 TERTO14746 1132 aaKnown RBP10.06□□□□□ -0.8
ITGA4-206ENST00000473002 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
ITGA4-206ENST00000473002 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
ITGA4-206ENST00000473002 TBC1D2BQ9UPU7 963 aa10.06□□□□□ -0.8
ITGA4-206ENST00000473002 SOBPA7XYQ1 873 aa10.05□□□□□ -0.8
ITGA4-206ENST00000473002 WFS1O76024 890 aa10.05□□□□□ -0.8
ITGA4-206ENST00000473002 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
ITGA4-206ENST00000473002 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
ITGA4-206ENST00000473002 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
ITGA4-206ENST00000473002 PRM3Q9NNZ6 103 aa10.03□□□□□ -0.8
ITGA4-206ENST00000473002 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
ITGA4-206ENST00000473002 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
ITGA4-206ENST00000473002 MAN1A2O60476 641 aa10.02□□□□□ -0.81
ITGA4-206ENST00000473002 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
ITGA4-206ENST00000473002 LILRA1O75019 489 aa10.01□□□□□ -0.81
ITGA4-206ENST00000473002 MCCD1P59942 119 aaPredicted RBP10.01□□□□□ -0.81
ITGA4-206ENST00000473002 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
ITGA4-206ENST00000473002 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
ITGA4-206ENST00000473002 SPINT1O43278 529 aa10□□□□□ -0.81
ITGA4-206ENST00000473002 RELBQ01201 579 aa10□□□□□ -0.81
ITGA4-206ENST00000473002 MCM6Q14566 821 aa10□□□□□ -0.81
ITGA4-206ENST00000473002 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
ITGA4-206ENST00000473002 DNMT3LQ9UJW3 386 aa9.99□□□□□ -0.81
ITGA4-206ENST00000473002 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 ADH1AP07327 375 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 IRF5Q13568 498 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 RNF20Q5VTR2 975 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 GDPD2Q9HCC8 539 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 CYLDQ9NQC7 956 aa9.98□□□□□ -0.81
ITGA4-206ENST00000473002 VEGFBP49765 207 aa9.97□□□□□ -0.81
ITGA4-206ENST00000473002 CCDC125Q86Z20 511 aa9.97□□□□□ -0.81
ITGA4-206ENST00000473002 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
ITGA4-206ENST00000473002 TRIM52Q96A61 297 aa9.96□□□□□ -0.82
ITGA4-206ENST00000473002 ZNF395Q9H8N7 513 aaPredicted RBP9.96□□□□□ -0.82
ITGA4-206ENST00000473002 FIGNL2A6NMB9 653 aa9.95□□□□□ -0.82
ITGA4-206ENST00000473002 H3BM21 787 aa9.95□□□□□ -0.82
ITGA4-206ENST00000473002 ABL2P42684 1182 aa9.95□□□□□ -0.82
ITGA4-206ENST00000473002 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
ITGA4-206ENST00000473002 INSM2Q96T92 566 aaPredicted RBP9.95□□□□□ -0.82
ITGA4-206ENST00000473002 NACADO15069 1562 aa9.95□□□□□ -0.82
ITGA4-206ENST00000473002 PTGIRP43119 386 aa9.94□□□□□ -0.82
ITGA4-206ENST00000473002 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
ITGA4-206ENST00000473002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
ITGA4-206ENST00000473002 ERVK-9P63128 1117 aa9.93□□□□□ -0.82
ITGA4-206ENST00000473002 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
ITGA4-206ENST00000473002 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
ITGA4-206ENST00000473002 CEP126Q9P2H0 1117 aa9.93□□□□□ -0.82
ITGA4-206ENST00000473002 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
ITGA4-206ENST00000473002 VAC14Q08AM6 782 aa9.92□□□□□ -0.82
ITGA4-206ENST00000473002 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
ITGA4-206ENST00000473002 IRF7Q92985 503 aa9.92□□□□□ -0.82
ITGA4-206ENST00000473002 WIPF1O43516 503 aa9.91□□□□□ -0.82
ITGA4-206ENST00000473002 SCTRP47872 440 aa9.91□□□□□ -0.82
ITGA4-206ENST00000473002 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
ITGA4-206ENST00000473002 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms