RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
HDAC1-205ENST00000472928 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
HDAC1-205ENST00000472928 PARD3Q8TEW0 1356 aa9.24□□□□□ -0.93
HDAC1-205ENST00000472928 TRIM37O94972 964 aa9.23□□□□□ -0.93
HDAC1-205ENST00000472928 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
HDAC1-205ENST00000472928 UTRNP46939 3433 aa9.23□□□□□ -0.93
HDAC1-205ENST00000472928 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
HDAC1-205ENST00000472928 ANKARQ7Z5J8 1434 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 PCDHB13Q9Y5F0 798 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 SPATA31A1Q5TZJ5 1347 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 ACIN1Q9UKV3 1341 aaKnown RBP9.22□□□□□ -0.93
HDAC1-205ENST00000472928 RREB1Q92766 1687 aa9.22□□□□□ -0.93
HDAC1-205ENST00000472928 APBA3O96018 575 aa9.21□□□□□ -0.94
HDAC1-205ENST00000472928 FAM196AQ6ZSG2 479 aa9.21□□□□□ -0.94
HDAC1-205ENST00000472928 PRAM1Q96QH2 718 aa9.21□□□□□ -0.94
HDAC1-205ENST00000472928 C14orf93Q9H972 538 aaKnown RBP9.21□□□□□ -0.94
HDAC1-205ENST00000472928 NUP188Q5SRE5 1749 aa9.21□□□□□ -0.94
HDAC1-205ENST00000472928 CRYBG1Q9Y4K1 1723 aa9.21□□□□□ -0.94
HDAC1-205ENST00000472928 SAFB2Q14151 953 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC1-205ENST00000472928 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
HDAC1-205ENST00000472928 ZNF579Q8NAF0 562 aaKnown RBP9.2□□□□□ -0.94
HDAC1-205ENST00000472928 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
HDAC1-205ENST00000472928 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
HDAC1-205ENST00000472928 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
HDAC1-205ENST00000472928 PRDM11Q9NQV5 511 aa9.19□□□□□ -0.94
HDAC1-205ENST00000472928 KCNQ2O43526 872 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 CFAP70Q5T0N1 1121 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 KIAA0232Q92628 1395 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 DLC1Q96QB1 1528 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 SPON1Q9HCB6 807 aa9.18□□□□□ -0.94
HDAC1-205ENST00000472928 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-205ENST00000472928 PSEN1P49768 467 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 NBR1Q14596 966 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 CHRNA2Q15822 529 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 NBPF8Q3BBV2 869 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 NBPF14Q5TI25 921 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 MPHOSPH9Q99550 1183 aa9.17□□□□□ -0.94
HDAC1-205ENST00000472928 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-205ENST00000472928 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
HDAC1-205ENST00000472928 ZNF784Q8NCA9 323 aaPredicted RBP9.16□□□□□ -0.94
HDAC1-205ENST00000472928 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
HDAC1-205ENST00000472928 STRN4Q9NRL3 753 aa9.16□□□□□ -0.94
HDAC1-205ENST00000472928 ADGRB1O14514 1584 aa9.16□□□□□ -0.94
HDAC1-205ENST00000472928 CEP350Q5VT06 3117 aa9.16□□□□□ -0.94
HDAC1-205ENST00000472928 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.94
HDAC1-205ENST00000472928 SSH2Q76I76 1423 aa9.15□□□□□ -0.94
HDAC1-205ENST00000472928 ANO8Q9HCE9 1232 aaPredicted RBP9.15□□□□□ -0.94
HDAC1-205ENST00000472928 POGKQ9P215 609 aa9.15□□□□□ -0.94
HDAC1-205ENST00000472928 PDE3BQ13370 1112 aa9.14□□□□□ -0.95
HDAC1-205ENST00000472928 USP35Q9P2H5 1018 aa9.14□□□□□ -0.95
HDAC1-205ENST00000472928 EIF3AQ14152 1382 aaKnown RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 PHRF1Q9P1Y6 1649 aaKnown RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 NRKQ7Z2Y5 1582 aa9.13□□□□□ -0.95
HDAC1-205ENST00000472928 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
HDAC1-205ENST00000472928 TCP11L2Q8N4U5 519 aa9.13□□□□□ -0.95
HDAC1-205ENST00000472928 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
HDAC1-205ENST00000472928 PDGFDQ9GZP0 370 aaPredicted RBP9.13□□□□□ -0.95
HDAC1-205ENST00000472928 CASZ1Q86V15 1759 aa9.13□□□□□ -0.95
HDAC1-205ENST00000472928 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
HDAC1-205ENST00000472928 MAP3K13O43283 966 aa9.12□□□□□ -0.95
HDAC1-205ENST00000472928 NEUROD1Q13562 356 aa9.12□□□□□ -0.95
HDAC1-205ENST00000472928 NGDNQ8NEJ9 315 aaKnown RBP9.12□□□□□ -0.95
HDAC1-205ENST00000472928 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
HDAC1-205ENST00000472928 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
HDAC1-205ENST00000472928 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 ATP7BP35670 1465 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 SENP3-EIF4A1A0A087X0R7 540 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 PTGER2P43116 358 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 NUTM2GQ5VZR2 741 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 PTF1AQ7RTS3 328 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 TRAK1Q9UPV9 953 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 CPDO75976 1380 aa9.11□□□□□ -0.95
HDAC1-205ENST00000472928 LMO7Q8WWI1 1683 aa9.1□□□□□ -0.95
HDAC1-205ENST00000472928 RGPD3A6NKT7 1758 aaPredicted RBP9.1□□□□□ -0.95
HDAC1-205ENST00000472928 RGPD4Q7Z3J3 1758 aa9.1□□□□□ -0.95
HDAC1-205ENST00000472928 PARP4Q9UKK3 1724 aaKnown RBP9.1□□□□□ -0.95
HDAC1-205ENST00000472928 MYOM1P52179 1685 aa9.1□□□□□ -0.95
HDAC1-205ENST00000472928 USP19O94966 1318 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 OVOS2A0A0G2JMS6 1433 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 OVOS2A0A0J9YW53 1432 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 OVOS2Q6IE36 1432 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 PLSCR1O15162 318 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 ZBTB7AO95365 584 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 EVA1CP58658 441 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 IFFO2Q5TF58 517 aa9.09□□□□□ -0.95
HDAC1-205ENST00000472928 THRAP3Q9Y2W1 955 aaKnown RBP9.09□□□□□ -0.95
HDAC1-205ENST00000472928 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
HDAC1-205ENST00000472928 POLR3AO14802 1390 aaPredicted RBP9.08□□□□□ -0.96
HDAC1-205ENST00000472928 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
HDAC1-205ENST00000472928 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms