RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 MAP3K19Q56UN5 1328 aa27.2■■□□□ 1.95
SF1-213ENST00000472725 IP6K1Q92551 441 aa27.2■■□□□ 1.94
SF1-213ENST00000472725 ATRNO75882 1429 aa27.19■■□□□ 1.94
SF1-213ENST00000472725 ZBTB7CA1YPR0 619 aa27.18■■□□□ 1.94
SF1-213ENST00000472725 VPS72Q15906 364 aa27.18■■□□□ 1.94
SF1-213ENST00000472725 CC2D1BQ5T0F9 858 aaKnown RBP27.18■■□□□ 1.94
SF1-213ENST00000472725 QTRT2Q9H974 415 aaKnown RBP27.18■■□□□ 1.94
SF1-213ENST00000472725 COL5A2P05997 1499 aaPredicted RBP27.18■■□□□ 1.94
SF1-213ENST00000472725 AMPHP49418 695 aa27.17■■□□□ 1.94
SF1-213ENST00000472725 EVA1CP58658 441 aa27.17■■□□□ 1.94
SF1-213ENST00000472725 FLT4P35916 1363 aa27.16■■□□□ 1.94
SF1-213ENST00000472725 RGPD5Q99666 1765 aa27.16■■□□□ 1.94
SF1-213ENST00000472725 RRS1Q15050 365 aaKnown RBP27.15■■□□□ 1.94
SF1-213ENST00000472725 AXIN2Q9Y2T1 843 aa27.15■■□□□ 1.94
SF1-213ENST00000472725 FBLN1P23142 703 aa27.14■■□□□ 1.94
SF1-213ENST00000472725 HOXC9P31274 260 aa27.14■■□□□ 1.94
SF1-213ENST00000472725 POLKQ9UBT6 870 aa27.14■■□□□ 1.94
SF1-213ENST00000472725 SMG6Q86US8 1419 aaKnown RBP27.14■■□□□ 1.93
SF1-213ENST00000472725 RBM6P78332 1123 aaKnown RBP27.12■■□□□ 1.93
SF1-213ENST00000472725 POTEAQ6S8J7 498 aa27.12■■□□□ 1.93
SF1-213ENST00000472725 WDR17Q8IZU2 1322 aa27.12■■□□□ 1.93
SF1-213ENST00000472725 INSRP06213 1382 aa27.11■■□□□ 1.93
SF1-213ENST00000472725 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
SF1-213ENST00000472725 GJD4Q96KN9 370 aaPredicted RBP27.11■■□□□ 1.93
SF1-213ENST00000472725 STRN4Q9NRL3 753 aa27.11■■□□□ 1.93
SF1-213ENST00000472725 ERBB3P21860 1342 aa27.11■■□□□ 1.93
SF1-213ENST00000472725 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
SF1-213ENST00000472725 PEAK1Q9H792 1746 aa27.1■■□□□ 1.93
SF1-213ENST00000472725 EMILIN1Q9Y6C2 1016 aa27.1■■□□□ 1.93
SF1-213ENST00000472725 CRB1P82279 1406 aa27.09■■□□□ 1.93
SF1-213ENST00000472725 RXRBP28702 533 aa27.09■■□□□ 1.93
SF1-213ENST00000472725 SPATA31A5Q5VU36 1347 aa27.09■■□□□ 1.93
SF1-213ENST00000472725 SPATA31A7Q8IWB4 1347 aa27.09■■□□□ 1.93
SF1-213ENST00000472725 CDK12Q9NYV4 1490 aaPredicted RBP27.07■■□□□ 1.92
SF1-213ENST00000472725 ANKRD24Q8TF21 1146 aa27.07■■□□□ 1.92
SF1-213ENST00000472725 THRAP3Q9Y2W1 955 aaKnown RBP27.07■■□□□ 1.92
SF1-213ENST00000472725 CCDC9Q9Y3X0 531 aaKnown RBP27.07■■□□□ 1.92
SF1-213ENST00000472725 PARD3Q8TEW0 1356 aa27.07■■□□□ 1.92
SF1-213ENST00000472725 LARP1Q6PKG0 1096 aaKnown RBP27.06■■□□□ 1.92
SF1-213ENST00000472725 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
SF1-213ENST00000472725 CSB-PGBD3P0DP91 1061 aa27.05■■□□□ 1.92
SF1-213ENST00000472725 RALBP1Q15311 655 aa27.05■■□□□ 1.92
SF1-213ENST00000472725 GLI3P10071 1580 aa27.05■■□□□ 1.92
SF1-213ENST00000472725 PPM1GO15355 546 aaPredicted RBP27.04■■□□□ 1.92
SF1-213ENST00000472725 HSP90AB2PQ58FF8 381 aa27.04■■□□□ 1.92
SF1-213ENST00000472725 TOM1L2Q6ZVM7 507 aa27.04■■□□□ 1.92
SF1-213ENST00000472725 CARD10Q9BWT7 1032 aa27.04■■□□□ 1.92
SF1-213ENST00000472725 ONECUT3O60422 494 aaPredicted RBP27.02■■□□□ 1.92
SF1-213ENST00000472725 BARGINQ6ZT62 677 aa27.02■■□□□ 1.92
SF1-213ENST00000472725 MTHFSP49914 203 aa27.01■■□□□ 1.91
SF1-213ENST00000472725 TCP11L2Q8N4U5 519 aa27.01■■□□□ 1.91
SF1-213ENST00000472725 CNGB1Q14028 1251 aaPredicted RBP26.99■■□□□ 1.91
SF1-213ENST00000472725 PPP2R1AP30153 589 aa26.98■■□□□ 1.91
SF1-213ENST00000472725 NLRP2Q9NX02 1062 aa26.98■■□□□ 1.91
SF1-213ENST00000472725 LTV1Q96GA3 475 aaPredicted RBP26.97■■□□□ 1.91
SF1-213ENST00000472725 CDCA7Q9BWT1 371 aaPredicted RBP26.97■■□□□ 1.91
SF1-213ENST00000472725 CFAP53Q96M91 514 aa26.94■■□□□ 1.9
SF1-213ENST00000472725 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
SF1-213ENST00000472725 WNK3Q9BYP7 1800 aa26.93■■□□□ 1.9
SF1-213ENST00000472725 THSD7AQ9UPZ6 1657 aa26.93■■□□□ 1.9
SF1-213ENST00000472725 EIF4A2Q14240 407 aaKnown RBP26.93■■□□□ 1.9
SF1-213ENST00000472725 FAM98CQ17RN3 349 aaKnown RBP26.93■■□□□ 1.9
SF1-213ENST00000472725 PRKRIP1Q9H875 184 aaPredicted RBP26.93■■□□□ 1.9
SF1-213ENST00000472725 RGPD2P0DJD1 1756 aa26.93■■□□□ 1.9
SF1-213ENST00000472725 RGS12O14924 1447 aa26.91■■□□□ 1.9
SF1-213ENST00000472725 NCAPD2Q15021 1401 aa26.91■■□□□ 1.9
SF1-213ENST00000472725 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
SF1-213ENST00000472725 NBPF6Q5VWK0 638 aa26.9■■□□□ 1.9
SF1-213ENST00000472725 NBPF4Q96M43 638 aa26.9■■□□□ 1.9
SF1-213ENST00000472725 PARP4Q9UKK3 1724 aaKnown RBP26.9■■□□□ 1.9
SF1-213ENST00000472725 DIAPH1O60610 1272 aaKnown RBP26.89■■□□□ 1.9
SF1-213ENST00000472725 SEPT12Q8IYM1 358 aa26.89■■□□□ 1.9
SF1-213ENST00000472725 DISP2A7MBM2 1401 aa26.89■■□□□ 1.89
SF1-213ENST00000472725 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
SF1-213ENST00000472725 IL13P35225 146 aa26.88■■□□□ 1.89
SF1-213ENST00000472725 PLEKHG2Q9H7P9 1386 aa26.87■■□□□ 1.89
SF1-213ENST00000472725 IL2RBP14784 551 aa26.87■■□□□ 1.89
SF1-213ENST00000472725 EYA1Q99502 592 aa26.87■■□□□ 1.89
SF1-213ENST00000472725 IGSF1Q8N6C5 1336 aa26.87■■□□□ 1.89
SF1-213ENST00000472725 RGPD1P0DJD0 1748 aa26.86■■□□□ 1.89
SF1-213ENST00000472725 ANP32CO43423 234 aa26.85■■□□□ 1.89
SF1-213ENST00000472725 A0A0G2JS52 829 aa26.84■■□□□ 1.89
SF1-213ENST00000472725 MYT1Q01538 1121 aa26.84■■□□□ 1.89
SF1-213ENST00000472725 NUDCQ9Y266 331 aa26.83■■□□□ 1.89
SF1-213ENST00000472725 BRWD3Q6RI45 1802 aa26.83■■□□□ 1.89
SF1-213ENST00000472725 RAPGEF4Q8WZA2 1011 aa26.82■■□□□ 1.88
SF1-213ENST00000472725 DDB1Q16531 1140 aa26.81■■□□□ 1.88
SF1-213ENST00000472725 LRRC37A3O60309 1634 aa26.8■■□□□ 1.88
SF1-213ENST00000472725 EXOC5O00471 708 aa26.8■■□□□ 1.88
SF1-213ENST00000472725 ILDR2Q71H61 639 aa26.8■■□□□ 1.88
SF1-213ENST00000472725 KDRP35968 1356 aa26.8■■□□□ 1.88
SF1-213ENST00000472725 TATP17735 454 aaPredicted RBP26.79■■□□□ 1.88
SF1-213ENST00000472725 KRT27Q7Z3Y8 459 aa26.79■■□□□ 1.88
SF1-213ENST00000472725 USHBP1Q8N6Y0 703 aa26.79■■□□□ 1.88
SF1-213ENST00000472725 OVOS2A0A0G2JMS6 1433 aa26.79■■□□□ 1.88
SF1-213ENST00000472725 PDE3BQ13370 1112 aa26.78■■□□□ 1.88
SF1-213ENST00000472725 TNS2Q63HR2 1409 aa26.78■■□□□ 1.88
SF1-213ENST00000472725 MEGF6O75095 1541 aa26.76■■□□□ 1.87
SF1-213ENST00000472725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.76■■□□□ 1.87
SF1-213ENST00000472725 SULT6B1Q6IMI4 303 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms