RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 AATKQ6ZMQ8 1374 aa8.87□□□□□ -0.99
SIK3-208ENST00000472648 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
SIK3-208ENST00000472648 POLD1P28340 1107 aa8.87□□□□□ -0.99
SIK3-208ENST00000472648 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
SIK3-208ENST00000472648 ZNF526Q8TF50 670 aaPredicted RBP8.87□□□□□ -0.99
SIK3-208ENST00000472648 PCNTO95613 3336 aa8.87□□□□□ -0.99
SIK3-208ENST00000472648 APLP1P51693 650 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 PRELPP51888 382 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 NUTM2GQ5VZR2 741 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 BCL9O00512 1426 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 CPDO75976 1380 aa8.86□□□□□ -0.99
SIK3-208ENST00000472648 TNS4Q8IZW8 715 aa8.85□□□□□ -0.99
SIK3-208ENST00000472648 COL18A1P39060 1754 aa8.85□□□□□ -0.99
SIK3-208ENST00000472648 SPATA31E1Q6ZUB1 1445 aa8.85□□□□□ -0.99
SIK3-208ENST00000472648 PRR36Q9H6K5 1346 aa8.84□□□□□ -0.99
SIK3-208ENST00000472648 SLC34A2O95436 690 aa8.84□□□□□ -0.99
SIK3-208ENST00000472648 YBX3P16989 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
SIK3-208ENST00000472648 COL13A1Q5TAT6 717 aaPredicted RBP8.84□□□□□ -0.99
SIK3-208ENST00000472648 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
SIK3-208ENST00000472648 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
SIK3-208ENST00000472648 ADCY9O60503 1353 aa8.84□□□□□ -0.99
SIK3-208ENST00000472648 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
SIK3-208ENST00000472648 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
SIK3-208ENST00000472648 LY75O60449 1722 aa8.83□□□□□ -1
SIK3-208ENST00000472648 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
SIK3-208ENST00000472648 MARCH10Q8NA82 808 aaPredicted RBP8.82□□□□□ -1
SIK3-208ENST00000472648 SLC16A10Q8TF71 515 aa8.82□□□□□ -1
SIK3-208ENST00000472648 SLC4A1APQ9BWU0 796 aaKnown RBP8.82□□□□□ -1
SIK3-208ENST00000472648 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
SIK3-208ENST00000472648 ZBTB7CA1YPR0 619 aa8.81□□□□□ -1
SIK3-208ENST00000472648 TOM1L2Q6ZVM7 507 aa8.81□□□□□ -1
SIK3-208ENST00000472648 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
SIK3-208ENST00000472648 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
SIK3-208ENST00000472648 ZNF827Q17R98 1081 aa8.8□□□□□ -1
SIK3-208ENST00000472648 CFAP70Q5T0N1 1121 aa8.8□□□□□ -1
SIK3-208ENST00000472648 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
SIK3-208ENST00000472648 ABTB2Q8N961 1025 aa8.8□□□□□ -1
SIK3-208ENST00000472648 CDCA7Q9BWT1 371 aaPredicted RBP8.8□□□□□ -1
SIK3-208ENST00000472648 BRD4O60885 1362 aaPredicted RBP8.8□□□□□ -1
SIK3-208ENST00000472648 ADGRB1O14514 1584 aa8.8□□□□□ -1
SIK3-208ENST00000472648 ABCC6O95255 1503 aa8.8□□□□□ -1
SIK3-208ENST00000472648 TNS2Q63HR2 1409 aa8.8□□□□□ -1
SIK3-208ENST00000472648 USP19O94966 1318 aa8.8□□□□□ -1
SIK3-208ENST00000472648 DOT1LQ8TEK3 1739 aa8.78□□□□□ -1
SIK3-208ENST00000472648 KIF3CO14782 793 aa8.78□□□□□ -1
SIK3-208ENST00000472648 C5P01031 1676 aa8.78□□□□□ -1
SIK3-208ENST00000472648 POLR3AO14802 1390 aaPredicted RBP8.77□□□□□ -1.01
SIK3-208ENST00000472648 LTN1O94822 1766 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 SLIT3O75094 1523 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 GCP02774 474 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 NLRP13Q86W25 1043 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 TRAK1Q9UPV9 953 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 TAF1LQ8IZX4 1826 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 WDR17Q8IZU2 1322 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 PKD1L3Q7Z443 1732 aa8.77□□□□□ -1.01
SIK3-208ENST00000472648 EXOC5O00471 708 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 NUDT16Q96DE0 195 aaKnown RBP8.76□□□□□ -1.01
SIK3-208ENST00000472648 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 PCDH10Q9P2E7 1040 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 WWC3Q9ULE0 1092 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 USP6P35125 1406 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 ACEP12821 1306 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
SIK3-208ENST00000472648 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
SIK3-208ENST00000472648 TNRC6CQ9HCJ0 1690 aaKnown RBP8.75□□□□□ -1.01
SIK3-208ENST00000472648 TOMM70O94826 608 aa8.75□□□□□ -1.01
SIK3-208ENST00000472648 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
SIK3-208ENST00000472648 AKT1S1Q96B36 256 aa8.75□□□□□ -1.01
SIK3-208ENST00000472648 TFCP2L1Q9NZI6 479 aa8.75□□□□□ -1.01
SIK3-208ENST00000472648 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
SIK3-208ENST00000472648 LRRC4BQ9NT99 713 aa8.74□□□□□ -1.01
SIK3-208ENST00000472648 N4BP2Q86UW6 1770 aaPredicted RBP8.73□□□□□ -1.01
SIK3-208ENST00000472648 CPSF1Q10570 1443 aaKnown RBP8.73□□□□□ -1.01
SIK3-208ENST00000472648 MSH5O43196 834 aa8.73□□□□□ -1.01
SIK3-208ENST00000472648 CSB-PGBD3P0DP91 1061 aa8.73□□□□□ -1.01
SIK3-208ENST00000472648 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
SIK3-208ENST00000472648 CCDC7Q96M83 1385 aa8.73□□□□□ -1.01
SIK3-208ENST00000472648 PPIP5K1Q6PFW1 1433 aa8.72□□□□□ -1.01
SIK3-208ENST00000472648 CARD10Q9BWT7 1032 aa8.72□□□□□ -1.01
SIK3-208ENST00000472648 KIF13BQ9NQT8 1826 aa8.72□□□□□ -1.01
SIK3-208ENST00000472648 BRCA1P38398 1863 aaKnown RBP8.72□□□□□ -1.01
SIK3-208ENST00000472648 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
SIK3-208ENST00000472648 ARFGEF1Q9Y6D6 1849 aa8.71□□□□□ -1.01
SIK3-208ENST00000472648 HTRA3P83110 453 aa8.71□□□□□ -1.02
SIK3-208ENST00000472648 C16orf71Q8IYS4 520 aaPredicted RBP8.71□□□□□ -1.02
SIK3-208ENST00000472648 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.02
SIK3-208ENST00000472648 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.02
SIK3-208ENST00000472648 KIAA1210Q9ULL0 1709 aa8.71□□□□□ -1.02
SIK3-208ENST00000472648 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
SIK3-208ENST00000472648 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
SIK3-208ENST00000472648 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
SIK3-208ENST00000472648 KIAA1551Q9HCM1 1747 aa8.69□□□□□ -1.02
SIK3-208ENST00000472648 SBF1O95248 1867 aa8.69□□□□□ -1.02
SIK3-208ENST00000472648 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
SIK3-208ENST00000472648 NLRP6P59044 892 aa8.69□□□□□ -1.02
SIK3-208ENST00000472648 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
SIK3-208ENST00000472648 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
SIK3-208ENST00000472648 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms