RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 ABCA3Q99758 1704 aa29.81■■■□□ 2.36
PAXBP1-208ENST00000472588 COL3A1P02461 1466 aaPredicted RBP29.8■■■□□ 2.36
PAXBP1-208ENST00000472588 PEAK1Q9H792 1746 aa29.8■■■□□ 2.36
PAXBP1-208ENST00000472588 CPDO75976 1380 aa29.79■■■□□ 2.36
PAXBP1-208ENST00000472588 HOXC9P31274 260 aa29.78■■■□□ 2.36
PAXBP1-208ENST00000472588 IP6K1Q92551 441 aa29.78■■■□□ 2.36
PAXBP1-208ENST00000472588 PHF23Q9BUL5 403 aaPredicted RBP29.78■■■□□ 2.36
PAXBP1-208ENST00000472588 ZC3H6P61129 1189 aaKnown RBP29.77■■■□□ 2.36
PAXBP1-208ENST00000472588 ABCC6O95255 1503 aa29.77■■■□□ 2.36
PAXBP1-208ENST00000472588 HSP90AB2PQ58FF8 381 aa29.75■■■□□ 2.35
PAXBP1-208ENST00000472588 MEX3CQ5U5Q3 659 aaKnown RBP29.75■■■□□ 2.35
PAXBP1-208ENST00000472588 ZBTB7CA1YPR0 619 aa29.74■■■□□ 2.35
PAXBP1-208ENST00000472588 BLMP54132 1417 aaPredicted RBP29.74■■■□□ 2.35
PAXBP1-208ENST00000472588 KIAA0232Q92628 1395 aa29.71■■■□□ 2.35
PAXBP1-208ENST00000472588 U2SURPO15042 1029 aaKnown RBP29.71■■■□□ 2.35
PAXBP1-208ENST00000472588 IL13P35225 146 aa29.71■■■□□ 2.35
PAXBP1-208ENST00000472588 ADAMTS8Q9UP79 889 aa29.71■■■□□ 2.35
PAXBP1-208ENST00000472588 EIF4A2Q14240 407 aaKnown RBP29.7■■■□□ 2.34
PAXBP1-208ENST00000472588 PRDM11Q9NQV5 511 aa29.7■■■□□ 2.34
PAXBP1-208ENST00000472588 U2AF1L5P0DN76 240 aaPredicted RBP29.69■■■□□ 2.34
PAXBP1-208ENST00000472588 U2AF1Q01081 240 aaKnown RBP eCLIP29.69■■■□□ 2.342e-6■■□□□ 13.4
PAXBP1-208ENST00000472588 ADAMTS2O95450 1211 aa29.68■■■□□ 2.34
PAXBP1-208ENST00000472588 PNNQ9H307 717 aaKnown RBP29.68■■■□□ 2.34
PAXBP1-208ENST00000472588 COL18A1P39060 1754 aa29.67■■■□□ 2.34
PAXBP1-208ENST00000472588 RGS17Q9UGC6 210 aaPredicted RBP29.65■■■□□ 2.34
PAXBP1-208ENST00000472588 C8orf37Q96NL8 207 aa29.63■■■□□ 2.33
PAXBP1-208ENST00000472588 RGPD5Q99666 1765 aa29.62■■■□□ 2.33
PAXBP1-208ENST00000472588 FCHSD2O94868 740 aa29.62■■■□□ 2.33
PAXBP1-208ENST00000472588 CHRNA2Q15822 529 aa29.62■■■□□ 2.33
PAXBP1-208ENST00000472588 COL14A1Q05707 1796 aaKnown RBP29.62■■■□□ 2.33
PAXBP1-208ENST00000472588 RGPD1P0DJD0 1748 aa29.61■■■□□ 2.33
PAXBP1-208ENST00000472588 AXIN2Q9Y2T1 843 aa29.61■■■□□ 2.33
PAXBP1-208ENST00000472588 ANKRD24Q8TF21 1146 aa29.6■■■□□ 2.33
PAXBP1-208ENST00000472588 LTV1Q96GA3 475 aaPredicted RBP29.6■■■□□ 2.33
PAXBP1-208ENST00000472588 LMO7Q8WWI1 1683 aa29.59■■■□□ 2.33
PAXBP1-208ENST00000472588 YTHDC1Q96MU7 727 aaKnown RBP29.59■■■□□ 2.33
PAXBP1-208ENST00000472588 FAM208AQ9UK61 1670 aaKnown RBP29.59■■■□□ 2.33
PAXBP1-208ENST00000472588 ERBB3P21860 1342 aa29.58■■■□□ 2.33
PAXBP1-208ENST00000472588 NEFMP07197 916 aa29.58■■■□□ 2.33
PAXBP1-208ENST00000472588 AFF2P51816 1311 aa29.57■■■□□ 2.32
PAXBP1-208ENST00000472588 FAM83GA6ND36 823 aa29.57■■■□□ 2.32
PAXBP1-208ENST00000472588 NGLY1Q96IV0 654 aa29.57■■■□□ 2.32
PAXBP1-208ENST00000472588 IGSF1Q8N6C5 1336 aa29.57■■■□□ 2.32
PAXBP1-208ENST00000472588 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
PAXBP1-208ENST00000472588 EYA1Q99502 592 aa29.56■■■□□ 2.32
PAXBP1-208ENST00000472588 HNRNPUQ00839 825 aaKnown RBP eCLIP29.54■■■□□ 2.32
PAXBP1-208ENST00000472588 CAMTA1Q9Y6Y1 1673 aa29.54■■■□□ 2.32
PAXBP1-208ENST00000472588 CSB-PGBD3P0DP91 1061 aa29.54■■■□□ 2.32
PAXBP1-208ENST00000472588 ZNF772Q68DY9 489 aaPredicted RBP29.54■■■□□ 2.32
PAXBP1-208ENST00000472588 SULT6B1Q6IMI4 303 aa29.54■■■□□ 2.32
PAXBP1-208ENST00000472588 HMOX1P09601 288 aa29.53■■■□□ 2.32
PAXBP1-208ENST00000472588 RSPH6AQ9H0K4 717 aa29.53■■■□□ 2.32
PAXBP1-208ENST00000472588 MAPK8IP3Q9UPT6 1336 aa29.52■■■□□ 2.32
PAXBP1-208ENST00000472588 KDRP35968 1356 aa29.52■■■□□ 2.32
PAXBP1-208ENST00000472588 POTEAQ6S8J7 498 aa29.52■■■□□ 2.32
PAXBP1-208ENST00000472588 COL5A2P05997 1499 aaPredicted RBP29.51■■■□□ 2.32
PAXBP1-208ENST00000472588 EVA1CP58658 441 aa29.51■■■□□ 2.31
PAXBP1-208ENST00000472588 ILDR2Q71H61 639 aa29.51■■■□□ 2.31
PAXBP1-208ENST00000472588 CCDC146Q8IYE0 955 aa29.51■■■□□ 2.31
PAXBP1-208ENST00000472588 PLCH1Q4KWH8 1693 aa29.5■■■□□ 2.31
PAXBP1-208ENST00000472588 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
PAXBP1-208ENST00000472588 WDR17Q8IZU2 1322 aa29.5■■■□□ 2.31
PAXBP1-208ENST00000472588 PRKAR2BP31323 418 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 NBPF6Q5VWK0 638 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 FNBP4Q8N3X1 1017 aaPredicted RBP29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 NBPF4Q96M43 638 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 PLEKHF1Q96S99 279 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 BTG4Q9NY30 223 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 RGPD2P0DJD1 1756 aa29.49■■■□□ 2.31
PAXBP1-208ENST00000472588 NLRP2Q9NX02 1062 aa29.47■■■□□ 2.31
PAXBP1-208ENST00000472588 NWD2Q9ULI1 1742 aa29.47■■■□□ 2.31
PAXBP1-208ENST00000472588 USP21Q9UK80 565 aa29.46■■■□□ 2.31
PAXBP1-208ENST00000472588 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.46■■■□□ 2.31
PAXBP1-208ENST00000472588 NCAPD2Q15021 1401 aa29.46■■■□□ 2.31
PAXBP1-208ENST00000472588 SLIT2O94813 1529 aa29.46■■■□□ 2.31
PAXBP1-208ENST00000472588 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.3
PAXBP1-208ENST00000472588 APAF1O14727 1248 aa29.44■■■□□ 2.3
PAXBP1-208ENST00000472588 TOM1L2Q6ZVM7 507 aa29.44■■■□□ 2.3
PAXBP1-208ENST00000472588 STRN4Q9NRL3 753 aa29.44■■■□□ 2.3
PAXBP1-208ENST00000472588 BCL9LQ86UU0 1499 aa29.44■■■□□ 2.3
PAXBP1-208ENST00000472588 NCBP3Q53F19 620 aaKnown RBP29.43■■■□□ 2.3
PAXBP1-208ENST00000472588 TCP11L2Q8N4U5 519 aa29.43■■■□□ 2.3
PAXBP1-208ENST00000472588 ZBED9Q6R2W3 1325 aa29.41■■■□□ 2.3
PAXBP1-208ENST00000472588 USHBP1Q8N6Y0 703 aa29.41■■■□□ 2.3
PAXBP1-208ENST00000472588 CRB1P82279 1406 aa29.4■■■□□ 2.3
PAXBP1-208ENST00000472588 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
PAXBP1-208ENST00000472588 QTRT2Q9H974 415 aaKnown RBP29.4■■■□□ 2.3
PAXBP1-208ENST00000472588 NRAPQ86VF7 1730 aa29.4■■■□□ 2.3
PAXBP1-208ENST00000472588 PLEKHG2Q9H7P9 1386 aa29.4■■■□□ 2.3
PAXBP1-208ENST00000472588 ATRNO75882 1429 aa29.38■■■□□ 2.29
PAXBP1-208ENST00000472588 LARP1Q6PKG0 1096 aaKnown RBP29.37■■■□□ 2.29
PAXBP1-208ENST00000472588 TRPC5Q9UL62 973 aaPredicted RBP29.37■■■□□ 2.29
PAXBP1-208ENST00000472588 UNC5CLQ8IV45 518 aa29.37■■■□□ 2.29
PAXBP1-208ENST00000472588 RAPGEF4Q8WZA2 1011 aa29.37■■■□□ 2.29
PAXBP1-208ENST00000472588 PHACTR3Q96KR7 559 aa29.37■■■□□ 2.29
PAXBP1-208ENST00000472588 TMPOP42166 694 aaKnown RBP29.36■■■□□ 2.29
PAXBP1-208ENST00000472588 NFE2L2Q16236 605 aa29.35■■■□□ 2.29
PAXBP1-208ENST00000472588 RXRBP28702 533 aa29.34■■■□□ 2.29
PAXBP1-208ENST00000472588 CCDC27Q2M243 656 aa29.34■■■□□ 2.29
PAXBP1-208ENST00000472588 AMOTQ4VCS5 1084 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms