RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 RREB1Q92766 1687 aa23.86■■□□□ 1.41
PKD1-208ENST00000472577 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
PKD1-208ENST00000472577 TTC21AQ8NDW8 1320 aa23.85■■□□□ 1.41
PKD1-208ENST00000472577 CPDO75976 1380 aa23.85■■□□□ 1.41
PKD1-208ENST00000472577 LARP1Q6PKG0 1096 aaKnown RBP23.84■■□□□ 1.41
PKD1-208ENST00000472577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
PKD1-208ENST00000472577 CAMKK2Q96RR4 588 aa23.84■■□□□ 1.41
PKD1-208ENST00000472577 NUP188Q5SRE5 1749 aa23.84■■□□□ 1.41
PKD1-208ENST00000472577 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
PKD1-208ENST00000472577 BARGINQ6ZT62 677 aa23.82■■□□□ 1.4
PKD1-208ENST00000472577 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
PKD1-208ENST00000472577 CCDC7Q96M83 1385 aa23.81■■□□□ 1.4
PKD1-208ENST00000472577 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
PKD1-208ENST00000472577 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
PKD1-208ENST00000472577 WASHC2AQ641Q2 1341 aa23.81■■□□□ 1.4
PKD1-208ENST00000472577 EVA1CP58658 441 aa23.8■■□□□ 1.4
PKD1-208ENST00000472577 NLRP6P59044 892 aa23.8■■□□□ 1.4
PKD1-208ENST00000472577 NME9Q86XW9 330 aa23.8■■□□□ 1.4
PKD1-208ENST00000472577 CARD14Q9BXL6 1004 aa23.8■■□□□ 1.4
PKD1-208ENST00000472577 APBA3O96018 575 aa23.78■■□□□ 1.4
PKD1-208ENST00000472577 USP54Q70EL1 1684 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 GCP02774 474 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 TCP11L2Q8N4U5 519 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 SLIT3O75094 1523 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 USP31Q70CQ4 1352 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 PARD3Q8TEW0 1356 aa23.77■■□□□ 1.4
PKD1-208ENST00000472577 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
PKD1-208ENST00000472577 PDE3BQ13370 1112 aa23.76■■□□□ 1.39
PKD1-208ENST00000472577 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
PKD1-208ENST00000472577 PEAK1Q9H792 1746 aa23.76■■□□□ 1.39
PKD1-208ENST00000472577 PANK3Q9H999 370 aa23.75■■□□□ 1.39
PKD1-208ENST00000472577 OVOS2A0A0J9YW53 1432 aa23.73■■□□□ 1.39
PKD1-208ENST00000472577 CRB1P82279 1406 aa23.73■■□□□ 1.39
PKD1-208ENST00000472577 OVOS2Q6IE36 1432 aa23.73■■□□□ 1.39
PKD1-208ENST00000472577 COL18A1P39060 1754 aa23.72■■□□□ 1.39
PKD1-208ENST00000472577 KIF20BQ96Q89 1820 aa23.72■■□□□ 1.39
PKD1-208ENST00000472577 WNK3Q9BYP7 1800 aa23.72■■□□□ 1.39
PKD1-208ENST00000472577 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
PKD1-208ENST00000472577 FYB1O15117 783 aa23.71■■□□□ 1.39
PKD1-208ENST00000472577 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.38
PKD1-208ENST00000472577 GGNBP2Q9H3C7 697 aa23.69■■□□□ 1.38
PKD1-208ENST00000472577 NFAT5O94916 1531 aa23.69■■□□□ 1.38
PKD1-208ENST00000472577 AATKQ6ZMQ8 1374 aa23.68■■□□□ 1.38
PKD1-208ENST00000472577 SOX12O15370 315 aa23.67■■□□□ 1.38
PKD1-208ENST00000472577 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
PKD1-208ENST00000472577 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
PKD1-208ENST00000472577 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
PKD1-208ENST00000472577 COG3Q96JB2 828 aa23.66■■□□□ 1.38
PKD1-208ENST00000472577 RGPD3A6NKT7 1758 aaPredicted RBP23.65■■□□□ 1.38
PKD1-208ENST00000472577 RGPD4Q7Z3J3 1758 aa23.65■■□□□ 1.38
PKD1-208ENST00000472577 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
PKD1-208ENST00000472577 RGPD5Q99666 1765 aa23.64■■□□□ 1.37
PKD1-208ENST00000472577 PTF1AQ7RTS3 328 aa23.62■■□□□ 1.37
PKD1-208ENST00000472577 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
PKD1-208ENST00000472577 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
PKD1-208ENST00000472577 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
PKD1-208ENST00000472577 ANKRD26Q9UPS8 1709 aa23.6■■□□□ 1.37
PKD1-208ENST00000472577 TOM1L2Q6ZVM7 507 aa23.6■■□□□ 1.37
PKD1-208ENST00000472577 KNSTRNQ9Y448 316 aa23.6■■□□□ 1.37
PKD1-208ENST00000472577 FBLN1P23142 703 aa23.59■■□□□ 1.37
PKD1-208ENST00000472577 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
PKD1-208ENST00000472577 LTN1O94822 1766 aa23.59■■□□□ 1.37
PKD1-208ENST00000472577 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
PKD1-208ENST00000472577 DDB1Q16531 1140 aa23.58■■□□□ 1.37
PKD1-208ENST00000472577 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
PKD1-208ENST00000472577 CASZ1Q86V15 1759 aa23.57■■□□□ 1.36
PKD1-208ENST00000472577 AMER1Q5JTC6 1135 aaPredicted RBP23.57■■□□□ 1.36
PKD1-208ENST00000472577 NSD2O96028 1365 aa23.56■■□□□ 1.36
PKD1-208ENST00000472577 MARCH10Q8NA82 808 aaPredicted RBP23.55■■□□□ 1.36
PKD1-208ENST00000472577 ABCC6O95255 1503 aa23.54■■□□□ 1.36
PKD1-208ENST00000472577 MAP3K19Q56UN5 1328 aa23.53■■□□□ 1.36
PKD1-208ENST00000472577 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
PKD1-208ENST00000472577 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
PKD1-208ENST00000472577 BCL9O00512 1426 aa23.51■■□□□ 1.35
PKD1-208ENST00000472577 PLSCR1O15162 318 aa23.51■■□□□ 1.35
PKD1-208ENST00000472577 BCL11BQ9C0K0 894 aaPredicted RBP23.51■■□□□ 1.35
PKD1-208ENST00000472577 KCNQ2O43526 872 aa23.5■■□□□ 1.35
PKD1-208ENST00000472577 PDGFDQ9GZP0 370 aaPredicted RBP23.5■■□□□ 1.35
PKD1-208ENST00000472577 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
PKD1-208ENST00000472577 PROM2Q8N271 834 aa23.49■■□□□ 1.35
PKD1-208ENST00000472577 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
PKD1-208ENST00000472577 CSB-PGBD3P0DP91 1061 aa23.48■■□□□ 1.35
PKD1-208ENST00000472577 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
PKD1-208ENST00000472577 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
PKD1-208ENST00000472577 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
PKD1-208ENST00000472577 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
PKD1-208ENST00000472577 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
PKD1-208ENST00000472577 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
PKD1-208ENST00000472577 IP6K1Q92551 441 aa23.47■■□□□ 1.35
PKD1-208ENST00000472577 CDCA7Q9BWT1 371 aaPredicted RBP23.47■■□□□ 1.35
PKD1-208ENST00000472577 PPP1R1BQ9UD71 204 aaPredicted RBP23.47■■□□□ 1.35
PKD1-208ENST00000472577 HOXC9P31274 260 aa23.46■■□□□ 1.35
PKD1-208ENST00000472577 AMPHP49418 695 aa23.46■■□□□ 1.35
PKD1-208ENST00000472577 EMILIN1Q9Y6C2 1016 aa23.46■■□□□ 1.35
PKD1-208ENST00000472577 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
PKD1-208ENST00000472577 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
PKD1-208ENST00000472577 RTL1A6NKG5 1358 aa23.45■■□□□ 1.34
PKD1-208ENST00000472577 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
PKD1-208ENST00000472577 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
PKD1-208ENST00000472577 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms