RNA–Protein interactions for RNA: ENST00000472375.5

HMGCS2-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 5

Gene HMGCS2, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-202ENST00000472375 SKIP12755 728 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 PDIA4P13667 645 aaKnown RBP8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 PLA2G2CQ5R387 149 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 ABCC9O60706 1549 aa8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 RFX1P22670 979 aa8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
HMGCS2-202ENST00000472375 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
HMGCS2-202ENST00000472375 ATG7O95352 703 aa8.6□□□□□ -1.03
HMGCS2-202ENST00000472375 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
HMGCS2-202ENST00000472375 RETREG2Q8NC44 543 aa8.6□□□□□ -1.03
HMGCS2-202ENST00000472375 ESPNB1AK53 854 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 EHBP1Q8NDI1 1231 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 TRAIPQ9BWF2 469 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
HMGCS2-202ENST00000472375 EML3Q32P44 896 aa8.58□□□□□ -1.04
HMGCS2-202ENST00000472375 MPNDQ8N594 471 aa8.58□□□□□ -1.04
HMGCS2-202ENST00000472375 DOLKQ9UPQ8 538 aa8.58□□□□□ -1.04
HMGCS2-202ENST00000472375 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
HMGCS2-202ENST00000472375 SKOR1P84550 965 aa8.57□□□□□ -1.04
HMGCS2-202ENST00000472375 ELOAQ14241 798 aaKnown RBP8.57□□□□□ -1.04
HMGCS2-202ENST00000472375 TRIM50Q86XT4 487 aa8.57□□□□□ -1.04
HMGCS2-202ENST00000472375 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
HMGCS2-202ENST00000472375 NCOA4Q13772 614 aa8.56□□□□□ -1.04
HMGCS2-202ENST00000472375 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
HMGCS2-202ENST00000472375 A0A0G2JS52 829 aa8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 VASH1Q7L8A9 365 aaPredicted RBP8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
HMGCS2-202ENST00000472375 WNT7AO00755 349 aa8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-202ENST00000472375 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
HMGCS2-202ENST00000472375 SLC19A1P41440 591 aa8.53□□□□□ -1.04
HMGCS2-202ENST00000472375 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
HMGCS2-202ENST00000472375 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
HMGCS2-202ENST00000472375 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
HMGCS2-202ENST00000472375 USP17L15C9J2P7 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L10C9JJH3 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L13C9JLJ4 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L12C9JPN9 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L11C9JVI0 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L21D6R901 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L18D6R9N7 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L22D6RA61 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L17D6RBQ6 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L19D6RCP7 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L20D6RJB6 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP17L24Q0WX57 530 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 DEPDC4Q8N2C3 294 aa8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 V9GY48 417 aaPredicted RBP8.52□□□□□ -1.05
HMGCS2-202ENST00000472375 USP4Q13107 963 aa8.51□□□□□ -1.05
HMGCS2-202ENST00000472375 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
HMGCS2-202ENST00000472375 SPRYD7Q5W111 196 aa8.51□□□□□ -1.05
HMGCS2-202ENST00000472375 B4GALNT3Q6L9W6 998 aa8.51□□□□□ -1.05
HMGCS2-202ENST00000472375 PCDHB11Q9Y5F2 797 aa8.51□□□□□ -1.05
HMGCS2-202ENST00000472375 ADH1CP00326 375 aa8.5□□□□□ -1.05
HMGCS2-202ENST00000472375 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
HMGCS2-202ENST00000472375 RASA1P20936 1047 aa8.5□□□□□ -1.05
HMGCS2-202ENST00000472375 FSHRP23945 695 aa8.5□□□□□ -1.05
HMGCS2-202ENST00000472375 NR5A1Q13285 461 aa8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 ZNF598Q86UK7 904 aaKnown RBP8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 NOVA2Q9UNW9 492 aaKnown RBP8.49□□□□□ -1.05
HMGCS2-202ENST00000472375 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 SIAH2O43255 324 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 GTF2IP78347 998 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 PTK7Q13308 1070 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 SIX5Q8N196 739 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 DNAAF2Q9NVR5 837 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 TLL2Q9Y6L7 1015 aa8.48□□□□□ -1.05
HMGCS2-202ENST00000472375 ARID5BQ14865 1188 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 CDCA8Q53HL2 280 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 ANKMY2Q8IV38 441 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 CCDC116Q8IYX3 515 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 MRGPRX2Q96LB1 330 aa8.47□□□□□ -1.05
HMGCS2-202ENST00000472375 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
HMGCS2-202ENST00000472375 BRD1O95696 1058 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms