RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 HSP90AB2PQ58FF8 381 aa25.97■■□□□ 1.75
CHMP2B-204ENST00000472024 NUDCQ9Y266 331 aa25.97■■□□□ 1.75
CHMP2B-204ENST00000472024 PPM1GO15355 546 aaPredicted RBP25.96■■□□□ 1.75
CHMP2B-204ENST00000472024 FAM9BQ8IZU0 186 aa25.96■■□□□ 1.75
CHMP2B-204ENST00000472024 CABLES1Q8TDN4 633 aa25.96■■□□□ 1.75
CHMP2B-204ENST00000472024 ADAMTS8Q9UP79 889 aa25.96■■□□□ 1.75
CHMP2B-204ENST00000472024 EIF4A2Q14240 407 aaKnown RBP25.95■■□□□ 1.74
CHMP2B-204ENST00000472024 LMO7Q8WWI1 1683 aa25.95■■□□□ 1.74
CHMP2B-204ENST00000472024 JCADQ9P266 1359 aa25.95■■□□□ 1.74
CHMP2B-204ENST00000472024 KIAA0232Q92628 1395 aa25.94■■□□□ 1.74
CHMP2B-204ENST00000472024 NCAPD2Q15021 1401 aa25.91■■□□□ 1.74
CHMP2B-204ENST00000472024 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
CHMP2B-204ENST00000472024 ZC3H6P61129 1189 aaKnown RBP25.9■■□□□ 1.74
CHMP2B-204ENST00000472024 KDRP35968 1356 aa25.89■■□□□ 1.74
CHMP2B-204ENST00000472024 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
CHMP2B-204ENST00000472024 FCHSD2O94868 740 aa25.87■■□□□ 1.73
CHMP2B-204ENST00000472024 AXIN2Q9Y2T1 843 aa25.87■■□□□ 1.73
CHMP2B-204ENST00000472024 U2AF1L5P0DN76 240 aaPredicted RBP25.86■■□□□ 1.73
CHMP2B-204ENST00000472024 U2AF1Q01081 240 aaKnown RBP eCLIP25.86■■□□□ 1.73
CHMP2B-204ENST00000472024 COL14A1Q05707 1796 aaKnown RBP25.86■■□□□ 1.73
CHMP2B-204ENST00000472024 FAM208AQ9UK61 1670 aaKnown RBP25.86■■□□□ 1.73
CHMP2B-204ENST00000472024 ERBB3P21860 1342 aa25.86■■□□□ 1.73
CHMP2B-204ENST00000472024 NCBP3Q53F19 620 aaKnown RBP25.85■■□□□ 1.73
CHMP2B-204ENST00000472024 SPATA31A6Q5VVP1 1343 aa25.85■■□□□ 1.73
CHMP2B-204ENST00000472024 HSPA1LP34931 641 aa25.84■■□□□ 1.73
CHMP2B-204ENST00000472024 PLEKHF1Q96S99 279 aa25.84■■□□□ 1.73
CHMP2B-204ENST00000472024 RSPH6AQ9H0K4 717 aa25.84■■□□□ 1.73
CHMP2B-204ENST00000472024 PRDM11Q9NQV5 511 aa25.84■■□□□ 1.73
CHMP2B-204ENST00000472024 RGPD5Q99666 1765 aa25.83■■□□□ 1.73
CHMP2B-204ENST00000472024 U2SURPO15042 1029 aaKnown RBP25.83■■□□□ 1.73
CHMP2B-204ENST00000472024 PNNQ9H307 717 aaKnown RBP25.83■■□□□ 1.73
CHMP2B-204ENST00000472024 HAP1P54257 671 aaPredicted RBP25.82■■□□□ 1.72
CHMP2B-204ENST00000472024 RUNDC1Q96C34 613 aa25.82■■□□□ 1.72
CHMP2B-204ENST00000472024 EYA1Q99502 592 aa25.82■■□□□ 1.72
CHMP2B-204ENST00000472024 COL5A2P05997 1499 aaPredicted RBP25.81■■□□□ 1.72
CHMP2B-204ENST00000472024 NGEFQ8N5V2 710 aa25.81■■□□□ 1.72
CHMP2B-204ENST00000472024 ANKRD24Q8TF21 1146 aa25.81■■□□□ 1.72
CHMP2B-204ENST00000472024 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
CHMP2B-204ENST00000472024 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
CHMP2B-204ENST00000472024 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
CHMP2B-204ENST00000472024 CHRNA2Q15822 529 aa25.79■■□□□ 1.72
CHMP2B-204ENST00000472024 ZBED9Q6R2W3 1325 aa25.77■■□□□ 1.72
CHMP2B-204ENST00000472024 ZBTB7CA1YPR0 619 aa25.76■■□□□ 1.71
CHMP2B-204ENST00000472024 HNRNPUQ00839 825 aaKnown RBP eCLIP25.76■■□□□ 1.71
CHMP2B-204ENST00000472024 NBPF6Q5VWK0 638 aa25.76■■□□□ 1.71
CHMP2B-204ENST00000472024 NBPF4Q96M43 638 aa25.76■■□□□ 1.71
CHMP2B-204ENST00000472024 WDR17Q8IZU2 1322 aa25.75■■□□□ 1.71
CHMP2B-204ENST00000472024 SULT6B1Q6IMI4 303 aa25.75■■□□□ 1.71
CHMP2B-204ENST00000472024 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 SLIT2O94813 1529 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 PRKAR2BP31323 418 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 LRP6O75581 1613 aa25.74■■□□□ 1.71
CHMP2B-204ENST00000472024 HMOX1P09601 288 aa25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 CCDC146Q8IYE0 955 aa25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 LTV1Q96GA3 475 aaPredicted RBP25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 YTHDC1Q96MU7 727 aaKnown RBP25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 PHF23Q9BUL5 403 aaPredicted RBP25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 NRAPQ86VF7 1730 aa25.73■■□□□ 1.71
CHMP2B-204ENST00000472024 APAF1O14727 1248 aa25.71■■□□□ 1.71
CHMP2B-204ENST00000472024 CCDC27Q2M243 656 aa25.7■■□□□ 1.7
CHMP2B-204ENST00000472024 TCP11L2Q8N4U5 519 aa25.7■■□□□ 1.7
CHMP2B-204ENST00000472024 ZNF521Q96K83 1311 aa25.69■■□□□ 1.7
CHMP2B-204ENST00000472024 MAPK8IP3Q9UPT6 1336 aa25.68■■□□□ 1.7
CHMP2B-204ENST00000472024 CRB1P82279 1406 aa25.67■■□□□ 1.7
CHMP2B-204ENST00000472024 PHACTR3Q96KR7 559 aa25.67■■□□□ 1.7
CHMP2B-204ENST00000472024 CARD10Q9BWT7 1032 aa25.67■■□□□ 1.7
CHMP2B-204ENST00000472024 BTG4Q9NY30 223 aa25.67■■□□□ 1.7
CHMP2B-204ENST00000472024 ADAMTS2O95450 1211 aa25.66■■□□□ 1.7
CHMP2B-204ENST00000472024 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
CHMP2B-204ENST00000472024 NUTM2BA6NNL0 878 aaPredicted RBP25.65■■□□□ 1.7
CHMP2B-204ENST00000472024 NUTM2EB1AL46 878 aaPredicted RBP25.65■■□□□ 1.7
CHMP2B-204ENST00000472024 NUTM2AQ8IVF1 878 aaPredicted RBP25.65■■□□□ 1.7
CHMP2B-204ENST00000472024 FNBP4Q8N3X1 1017 aaPredicted RBP25.65■■□□□ 1.7
CHMP2B-204ENST00000472024 NEFMP07197 916 aa25.64■■□□□ 1.7
CHMP2B-204ENST00000472024 NFE2L2Q16236 605 aa25.64■■□□□ 1.7
CHMP2B-204ENST00000472024 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.63■■□□□ 1.69
CHMP2B-204ENST00000472024 CSB-PGBD3P0DP91 1061 aa25.63■■□□□ 1.69
CHMP2B-204ENST00000472024 USHBP1Q8N6Y0 703 aa25.63■■□□□ 1.69
CHMP2B-204ENST00000472024 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
CHMP2B-204ENST00000472024 LARP1Q6PKG0 1096 aaKnown RBP25.62■■□□□ 1.69
CHMP2B-204ENST00000472024 BCL9LQ86UU0 1499 aa25.61■■□□□ 1.69
CHMP2B-204ENST00000472024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHMP2B-204ENST00000472024 EVA1CP58658 441 aa25.6■■□□□ 1.69
CHMP2B-204ENST00000472024 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
CHMP2B-204ENST00000472024 MEGF6O75095 1541 aa25.59■■□□□ 1.69
CHMP2B-204ENST00000472024 TOM1L2Q6ZVM7 507 aa25.59■■□□□ 1.69
CHMP2B-204ENST00000472024 GAS2L2Q8NHY3 880 aa25.59■■□□□ 1.69
CHMP2B-204ENST00000472024 OVOS2A0A0G2JMS6 1433 aa25.59■■□□□ 1.69
CHMP2B-204ENST00000472024 PKD1L3Q7Z443 1732 aa25.59■■□□□ 1.69
CHMP2B-204ENST00000472024 PARP4Q9UKK3 1724 aaKnown RBP25.58■■□□□ 1.69
CHMP2B-204ENST00000472024 DISP2A7MBM2 1401 aa25.58■■□□□ 1.69
CHMP2B-204ENST00000472024 AMOTQ4VCS5 1084 aa25.58■■□□□ 1.69
CHMP2B-204ENST00000472024 WWC1Q8IX03 1113 aa25.58■■□□□ 1.69
CHMP2B-204ENST00000472024 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
CHMP2B-204ENST00000472024 MTHFSDQ2M296 383 aaKnown RBP25.57■■□□□ 1.68
CHMP2B-204ENST00000472024 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
CHMP2B-204ENST00000472024 RIPK4P57078 832 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms