RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 FBLN1P23142 703 aa25.38■■□□□ 1.65
SNX4-203ENST00000471751 CCDC184Q52MB2 194 aa25.38■■□□□ 1.65
SNX4-203ENST00000471751 LRP6O75581 1613 aa25.38■■□□□ 1.65
SNX4-203ENST00000471751 ABCA3Q99758 1704 aa25.38■■□□□ 1.65
SNX4-203ENST00000471751 HOXC9P31274 260 aa25.37■■□□□ 1.65
SNX4-203ENST00000471751 HAP1P54257 671 aaPredicted RBP25.37■■□□□ 1.65
SNX4-203ENST00000471751 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
SNX4-203ENST00000471751 PPM1GO15355 546 aaPredicted RBP25.36■■□□□ 1.65
SNX4-203ENST00000471751 CABLES1Q8TDN4 633 aa25.36■■□□□ 1.65
SNX4-203ENST00000471751 SOX12O15370 315 aa25.35■■□□□ 1.65
SNX4-203ENST00000471751 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
SNX4-203ENST00000471751 WDR43Q15061 677 aaKnown RBP eCLIP25.34■■□□□ 1.65
SNX4-203ENST00000471751 PEAK1Q9H792 1746 aa25.33■■□□□ 1.65
SNX4-203ENST00000471751 IL13P35225 146 aa25.33■■□□□ 1.64
SNX4-203ENST00000471751 ZC3H6P61129 1189 aaKnown RBP25.33■■□□□ 1.64
SNX4-203ENST00000471751 COL18A1P39060 1754 aa25.32■■□□□ 1.64
SNX4-203ENST00000471751 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
SNX4-203ENST00000471751 KIAA0232Q92628 1395 aa25.31■■□□□ 1.64
SNX4-203ENST00000471751 ADAMTS2O95450 1211 aa25.31■■□□□ 1.64
SNX4-203ENST00000471751 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
SNX4-203ENST00000471751 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
SNX4-203ENST00000471751 C8orf37Q96NL8 207 aa25.28■■□□□ 1.64
SNX4-203ENST00000471751 FCHSD2O94868 740 aa25.27■■□□□ 1.64
SNX4-203ENST00000471751 COL14A1Q05707 1796 aaKnown RBP25.26■■□□□ 1.63
SNX4-203ENST00000471751 ZNF772Q68DY9 489 aaPredicted RBP25.26■■□□□ 1.63
SNX4-203ENST00000471751 FAM9BQ8IZU0 186 aa25.25■■□□□ 1.63
SNX4-203ENST00000471751 ADAMTS8Q9UP79 889 aa25.25■■□□□ 1.63
SNX4-203ENST00000471751 LMO7Q8WWI1 1683 aa25.25■■□□□ 1.63
SNX4-203ENST00000471751 AFF2P51816 1311 aa25.24■■□□□ 1.63
SNX4-203ENST00000471751 FAM83GA6ND36 823 aa25.24■■□□□ 1.63
SNX4-203ENST00000471751 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
SNX4-203ENST00000471751 AXIN2Q9Y2T1 843 aa25.24■■□□□ 1.63
SNX4-203ENST00000471751 PLEKHG2Q9H7P9 1386 aa25.23■■□□□ 1.63
SNX4-203ENST00000471751 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
SNX4-203ENST00000471751 ERBB3P21860 1342 aa25.23■■□□□ 1.63
SNX4-203ENST00000471751 PLEKHG5O94827 1062 aa25.23■■□□□ 1.63
SNX4-203ENST00000471751 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
SNX4-203ENST00000471751 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
SNX4-203ENST00000471751 NCBP3Q53F19 620 aaKnown RBP25.23■■□□□ 1.63
SNX4-203ENST00000471751 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
SNX4-203ENST00000471751 RGPD1P0DJD0 1748 aa25.22■■□□□ 1.63
SNX4-203ENST00000471751 U2SURPO15042 1029 aaKnown RBP25.21■■□□□ 1.63
SNX4-203ENST00000471751 ANKRD24Q8TF21 1146 aa25.21■■□□□ 1.63
SNX4-203ENST00000471751 KDRP35968 1356 aa25.21■■□□□ 1.63
SNX4-203ENST00000471751 NGLY1Q96IV0 654 aa25.2■■□□□ 1.62
SNX4-203ENST00000471751 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
SNX4-203ENST00000471751 EYA1Q99502 592 aa25.19■■□□□ 1.62
SNX4-203ENST00000471751 CAMTA1Q9Y6Y1 1673 aa25.19■■□□□ 1.62
SNX4-203ENST00000471751 RGPD5Q99666 1765 aa25.19■■□□□ 1.62
SNX4-203ENST00000471751 ZBTB7CA1YPR0 619 aa25.18■■□□□ 1.62
SNX4-203ENST00000471751 CHRNA2Q15822 529 aa25.18■■□□□ 1.62
SNX4-203ENST00000471751 WDR17Q8IZU2 1322 aa25.18■■□□□ 1.62
SNX4-203ENST00000471751 NEFMP07197 916 aa25.17■■□□□ 1.62
SNX4-203ENST00000471751 RUNDC1Q96C34 613 aa25.17■■□□□ 1.62
SNX4-203ENST00000471751 NWD2Q9ULI1 1742 aa25.17■■□□□ 1.62
SNX4-203ENST00000471751 COL5A2P05997 1499 aaPredicted RBP25.16■■□□□ 1.62
SNX4-203ENST00000471751 RXRBP28702 533 aa25.15■■□□□ 1.62
SNX4-203ENST00000471751 RSPH6AQ9H0K4 717 aa25.15■■□□□ 1.62
SNX4-203ENST00000471751 EVA1CP58658 441 aa25.14■■□□□ 1.62
SNX4-203ENST00000471751 FNBP4Q8N3X1 1017 aaPredicted RBP25.14■■□□□ 1.62
SNX4-203ENST00000471751 PLEKHF1Q96S99 279 aa25.14■■□□□ 1.62
SNX4-203ENST00000471751 QTRT2Q9H974 415 aaKnown RBP25.14■■□□□ 1.62
SNX4-203ENST00000471751 SLIT2O94813 1529 aa25.14■■□□□ 1.62
SNX4-203ENST00000471751 SULT6B1Q6IMI4 303 aa25.13■■□□□ 1.61
SNX4-203ENST00000471751 BTG4Q9NY30 223 aa25.13■■□□□ 1.61
SNX4-203ENST00000471751 NBPF6Q5VWK0 638 aa25.12■■□□□ 1.61
SNX4-203ENST00000471751 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
SNX4-203ENST00000471751 NBPF4Q96M43 638 aa25.12■■□□□ 1.61
SNX4-203ENST00000471751 CARD10Q9BWT7 1032 aa25.12■■□□□ 1.61
SNX4-203ENST00000471751 CSB-PGBD3P0DP91 1061 aa25.12■■□□□ 1.61
SNX4-203ENST00000471751 CRB1P82279 1406 aa25.1■■□□□ 1.61
SNX4-203ENST00000471751 USP21Q9UK80 565 aa25.1■■□□□ 1.61
SNX4-203ENST00000471751 PLCH1Q4KWH8 1693 aa25.09■■□□□ 1.61
SNX4-203ENST00000471751 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.61
SNX4-203ENST00000471751 PRKAR2BP31323 418 aa25.08■■□□□ 1.6
SNX4-203ENST00000471751 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.6
SNX4-203ENST00000471751 NLRP2Q9NX02 1062 aa25.08■■□□□ 1.6
SNX4-203ENST00000471751 THRAP3Q9Y2W1 955 aaKnown RBP25.08■■□□□ 1.6
SNX4-203ENST00000471751 HMOX1P09601 288 aa25.07■■□□□ 1.6
SNX4-203ENST00000471751 UNC5CLQ8IV45 518 aa25.07■■□□□ 1.6
SNX4-203ENST00000471751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.07■■□□□ 1.62e-6■■□□□ 14.4
SNX4-203ENST00000471751 AMOTQ4VCS5 1084 aa25.06■■□□□ 1.6
SNX4-203ENST00000471751 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.05■■□□□ 1.6
SNX4-203ENST00000471751 RGPD2P0DJD1 1756 aa25.05■■□□□ 1.6
SNX4-203ENST00000471751 CCDC27Q2M243 656 aa25.05■■□□□ 1.6
SNX4-203ENST00000471751 NRAPQ86VF7 1730 aa25.04■■□□□ 1.6
SNX4-203ENST00000471751 RBM6P78332 1123 aaKnown RBP25.04■■□□□ 1.6
SNX4-203ENST00000471751 TCP11L2Q8N4U5 519 aa25.04■■□□□ 1.6
SNX4-203ENST00000471751 CDCA7Q9BWT1 371 aaPredicted RBP25.04■■□□□ 1.6
SNX4-203ENST00000471751 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
SNX4-203ENST00000471751 AEBP1Q8IUX7 1158 aa25.03■■□□□ 1.6
SNX4-203ENST00000471751 RAPGEF4Q8WZA2 1011 aa25.03■■□□□ 1.6
SNX4-203ENST00000471751 STRN4Q9NRL3 753 aa25.03■■□□□ 1.6
SNX4-203ENST00000471751 GAS2L2Q8NHY3 880 aa25.02■■□□□ 1.6
SNX4-203ENST00000471751 BCL9LQ86UU0 1499 aa25.01■■□□□ 1.59
SNX4-203ENST00000471751 ZBED9Q6R2W3 1325 aa25.01■■□□□ 1.59
SNX4-203ENST00000471751 APAF1O14727 1248 aa25.01■■□□□ 1.59
SNX4-203ENST00000471751 HNRNPUQ00839 825 aaKnown RBP eCLIP25.01■■□□□ 1.59
SNX4-203ENST00000471751 VPS72Q15906 364 aa25.01■■□□□ 1.59
SNX4-203ENST00000471751 PLEKHO1Q53GL0 409 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms