RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 FAM182BQ5T319 152 aa21.06■□□□□ 0.96
VPS8-221ENST00000471655 A0A1W2PP64 1363 aa21.06■□□□□ 0.96
VPS8-221ENST00000471655 WDR17Q8IZU2 1322 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 ABCC6O95255 1503 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 RGPD1P0DJD0 1748 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 PDE3BQ13370 1112 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 USP47Q96K76 1375 aa21.05■□□□□ 0.96
VPS8-221ENST00000471655 NME9Q86XW9 330 aa21.04■□□□□ 0.96
VPS8-221ENST00000471655 PARP4Q9UKK3 1724 aaKnown RBP21.04■□□□□ 0.96
VPS8-221ENST00000471655 TMF1P82094 1093 aa21.03■□□□□ 0.96
VPS8-221ENST00000471655 TOM1L2Q6ZVM7 507 aa21.03■□□□□ 0.96
VPS8-221ENST00000471655 DISP2A7MBM2 1401 aa21.03■□□□□ 0.96
VPS8-221ENST00000471655 C11orf95C9JLR9 678 aaPredicted RBP21.02■□□□□ 0.96
VPS8-221ENST00000471655 SOX12O15370 315 aa21.01■□□□□ 0.95
VPS8-221ENST00000471655 CDCA7Q9BWT1 371 aaPredicted RBP21■□□□□ 0.95
VPS8-221ENST00000471655 CARD10Q9BWT7 1032 aa21■□□□□ 0.95
VPS8-221ENST00000471655 TNS1Q9HBL0 1735 aaKnown RBP20.99■□□□□ 0.95
VPS8-221ENST00000471655 OVOS2A0A0J9YW53 1432 aa20.99■□□□□ 0.95
VPS8-221ENST00000471655 OVOS2Q6IE36 1432 aa20.99■□□□□ 0.95
VPS8-221ENST00000471655 CDCA8Q53HL2 280 aa20.99■□□□□ 0.95
VPS8-221ENST00000471655 RGPD5Q99666 1765 aa20.99■□□□□ 0.95
VPS8-221ENST00000471655 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
VPS8-221ENST00000471655 TRIM37O94972 964 aa20.97■□□□□ 0.95
VPS8-221ENST00000471655 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
VPS8-221ENST00000471655 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
VPS8-221ENST00000471655 DDB1Q16531 1140 aa20.96■□□□□ 0.95
VPS8-221ENST00000471655 CCDC7Q96M83 1385 aa20.95■□□□□ 0.94
VPS8-221ENST00000471655 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
VPS8-221ENST00000471655 WNK3Q9BYP7 1800 aa20.94■□□□□ 0.94
VPS8-221ENST00000471655 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
VPS8-221ENST00000471655 LRRC37A3O60309 1634 aa20.93■□□□□ 0.94
VPS8-221ENST00000471655 LTN1O94822 1766 aa20.93■□□□□ 0.94
VPS8-221ENST00000471655 ERBB3P21860 1342 aa20.93■□□□□ 0.94
VPS8-221ENST00000471655 OVOS2A0A0G2JMS6 1433 aa20.93■□□□□ 0.94
VPS8-221ENST00000471655 PEAK1Q9H792 1746 aa20.92■□□□□ 0.94
VPS8-221ENST00000471655 APBA3O96018 575 aa20.92■□□□□ 0.94
VPS8-221ENST00000471655 COG3Q96JB2 828 aa20.92■□□□□ 0.94
VPS8-221ENST00000471655 BCL9O00512 1426 aa20.91■□□□□ 0.94
VPS8-221ENST00000471655 EZH2Q15910 746 aaKnown RBP20.9■□□□□ 0.94
VPS8-221ENST00000471655 IP6K1Q92551 441 aa20.9■□□□□ 0.94
VPS8-221ENST00000471655 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
VPS8-221ENST00000471655 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
VPS8-221ENST00000471655 EXOC5O00471 708 aa20.88■□□□□ 0.93
VPS8-221ENST00000471655 FYB1O15117 783 aa20.88■□□□□ 0.93
VPS8-221ENST00000471655 MARCH10Q8NA82 808 aaPredicted RBP20.88■□□□□ 0.93
VPS8-221ENST00000471655 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
VPS8-221ENST00000471655 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
VPS8-221ENST00000471655 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
VPS8-221ENST00000471655 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
VPS8-221ENST00000471655 PLSCR1O15162 318 aa20.84■□□□□ 0.93
VPS8-221ENST00000471655 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
VPS8-221ENST00000471655 RREB1Q92766 1687 aa20.83■□□□□ 0.93
VPS8-221ENST00000471655 IL2RBP14784 551 aa20.83■□□□□ 0.93
VPS8-221ENST00000471655 HOXC9P31274 260 aa20.83■□□□□ 0.93
VPS8-221ENST00000471655 MYOM1P52179 1685 aa20.83■□□□□ 0.92
VPS8-221ENST00000471655 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
VPS8-221ENST00000471655 CARD14Q9BXL6 1004 aa20.82■□□□□ 0.92
VPS8-221ENST00000471655 GGNBP2Q9H3C7 697 aa20.82■□□□□ 0.92
VPS8-221ENST00000471655 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
VPS8-221ENST00000471655 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
VPS8-221ENST00000471655 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
VPS8-221ENST00000471655 AMPHP49418 695 aa20.81■□□□□ 0.92
VPS8-221ENST00000471655 EIF4G2P78344 907 aaKnown RBP eCLIP20.81■□□□□ 0.92
VPS8-221ENST00000471655 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
VPS8-221ENST00000471655 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
VPS8-221ENST00000471655 FBLN1P23142 703 aa20.8■□□□□ 0.92
VPS8-221ENST00000471655 LRP5O75197 1615 aa20.79■□□□□ 0.92
VPS8-221ENST00000471655 R3HDM1Q15032 1099 aaKnown RBP20.79■□□□□ 0.92
VPS8-221ENST00000471655 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
VPS8-221ENST00000471655 NBPF14Q5TI25 921 aa20.78■□□□□ 0.92
VPS8-221ENST00000471655 NUP188Q5SRE5 1749 aa20.78■□□□□ 0.92
VPS8-221ENST00000471655 KIF24Q5T7B8 1368 aa20.77■□□□□ 0.92
VPS8-221ENST00000471655 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.91
VPS8-221ENST00000471655 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
VPS8-221ENST00000471655 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
VPS8-221ENST00000471655 PTF1AQ7RTS3 328 aa20.76■□□□□ 0.91
VPS8-221ENST00000471655 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
VPS8-221ENST00000471655 INSRP06213 1382 aa20.72■□□□□ 0.91
VPS8-221ENST00000471655 PROM2Q8N271 834 aa20.72■□□□□ 0.91
VPS8-221ENST00000471655 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
VPS8-221ENST00000471655 FLT4P35916 1363 aa20.72■□□□□ 0.91
VPS8-221ENST00000471655 NHSQ6T4R5 1651 aa20.71■□□□□ 0.91
VPS8-221ENST00000471655 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
VPS8-221ENST00000471655 KCNQ2O43526 872 aa20.7■□□□□ 0.9
VPS8-221ENST00000471655 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
VPS8-221ENST00000471655 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
VPS8-221ENST00000471655 HSP90AB2PQ58FF8 381 aa20.69■□□□□ 0.9
VPS8-221ENST00000471655 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
VPS8-221ENST00000471655 TXNRD1Q16881 649 aa20.67■□□□□ 0.9
VPS8-221ENST00000471655 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
VPS8-221ENST00000471655 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
VPS8-221ENST00000471655 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
VPS8-221ENST00000471655 POLR3GLQ9BT43 218 aa20.66■□□□□ 0.9
VPS8-221ENST00000471655 MEGF6O75095 1541 aa20.65■□□□□ 0.9
VPS8-221ENST00000471655 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
VPS8-221ENST00000471655 ANKRD26Q9UPS8 1709 aa20.64■□□□□ 0.9
VPS8-221ENST00000471655 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
VPS8-221ENST00000471655 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
VPS8-221ENST00000471655 PANK3Q9H999 370 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms