RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 FAM182BQ5T319 152 aa32.87■■■□□ 2.85
RNF220-208ENST00000471494 THRAP3Q9Y2W1 955 aaKnown RBP32.87■■■□□ 2.85
RNF220-208ENST00000471494 PARP4Q9UKK3 1724 aaKnown RBP32.87■■■□□ 2.85
RNF220-208ENST00000471494 NME9Q86XW9 330 aa32.86■■■□□ 2.85
RNF220-208ENST00000471494 ZRANB1Q9UGI0 708 aa32.86■■■□□ 2.85
RNF220-208ENST00000471494 LTN1O94822 1766 aa32.86■■■□□ 2.85
RNF220-208ENST00000471494 TMF1P82094 1093 aa32.85■■■□□ 2.85
RNF220-208ENST00000471494 DEFB132Q7Z7B7 95 aa32.85■■■□□ 2.85
RNF220-208ENST00000471494 ABCC6O95255 1503 aa32.85■■■□□ 2.85
RNF220-208ENST00000471494 WNK3Q9BYP7 1800 aa32.84■■■□□ 2.85
RNF220-208ENST00000471494 AXIN2Q9Y2T1 843 aa32.82■■■□□ 2.84
RNF220-208ENST00000471494 TNS1Q9HBL0 1735 aaKnown RBP32.82■■■□□ 2.84
RNF220-208ENST00000471494 PDE3BQ13370 1112 aa32.81■■■□□ 2.84
RNF220-208ENST00000471494 TOM1L2Q6ZVM7 507 aa32.81■■■□□ 2.84
RNF220-208ENST00000471494 CCER1Q8TC90 406 aaPredicted RBP32.81■■■□□ 2.84
RNF220-208ENST00000471494 WDR17Q8IZU2 1322 aa32.8■■■□□ 2.84
RNF220-208ENST00000471494 BAG6P46379 1132 aa32.79■■■□□ 2.84
RNF220-208ENST00000471494 FAM196AQ6ZSG2 479 aa32.78■■■□□ 2.84
RNF220-208ENST00000471494 OVOS2A0A0J9YW53 1432 aa32.77■■■□□ 2.84
RNF220-208ENST00000471494 OVOS2Q6IE36 1432 aa32.77■■■□□ 2.84
RNF220-208ENST00000471494 LRRC37A3O60309 1634 aa32.77■■■□□ 2.84
RNF220-208ENST00000471494 ANKRD36BQ8N2N9 1353 aa32.76■■■□□ 2.83
RNF220-208ENST00000471494 CSB-PGBD3P0DP91 1061 aa32.76■■■□□ 2.83
RNF220-208ENST00000471494 CDCA8Q53HL2 280 aa32.75■■■□□ 2.83
RNF220-208ENST00000471494 DISP2A7MBM2 1401 aa32.69■■■□□ 2.82
RNF220-208ENST00000471494 MYOM1P52179 1685 aa32.69■■■□□ 2.82
RNF220-208ENST00000471494 TRIM37O94972 964 aa32.69■■■□□ 2.82
RNF220-208ENST00000471494 CARD10Q9BWT7 1032 aa32.69■■■□□ 2.82
RNF220-208ENST00000471494 COG3Q96JB2 828 aa32.67■■■□□ 2.82
RNF220-208ENST00000471494 KIF20BQ96Q89 1820 aa32.66■■■□□ 2.82
RNF220-208ENST00000471494 EN1Q05925 392 aaPredicted RBP32.66■■■□□ 2.82
RNF220-208ENST00000471494 DDB1Q16531 1140 aa32.66■■■□□ 2.82
RNF220-208ENST00000471494 CDCA7Q9BWT1 371 aaPredicted RBP32.66■■■□□ 2.82
RNF220-208ENST00000471494 CCDC7Q96M83 1385 aa32.66■■■□□ 2.82
RNF220-208ENST00000471494 PEAK1Q9H792 1746 aa32.65■■■□□ 2.82
RNF220-208ENST00000471494 OVOS2A0A0G2JMS6 1433 aa32.65■■■□□ 2.82
RNF220-208ENST00000471494 ERBB3P21860 1342 aa32.64■■■□□ 2.82
RNF220-208ENST00000471494 SBF2Q86WG5 1849 aa32.63■■■□□ 2.81
RNF220-208ENST00000471494 C11orf95C9JLR9 678 aaPredicted RBP32.62■■■□□ 2.81
RNF220-208ENST00000471494 FAM208AQ9UK61 1670 aaKnown RBP32.61■■■□□ 2.81
RNF220-208ENST00000471494 APBA3O96018 575 aa32.59■■■□□ 2.81
RNF220-208ENST00000471494 NLRP2Q9NX02 1062 aa32.59■■■□□ 2.81
RNF220-208ENST00000471494 ANKRD24Q8TF21 1146 aa32.58■■■□□ 2.81
RNF220-208ENST00000471494 IP6K1Q92551 441 aa32.56■■■□□ 2.8
RNF220-208ENST00000471494 PARD3Q8TEW0 1356 aa32.56■■■□□ 2.8
RNF220-208ENST00000471494 EZH2Q15910 746 aaKnown RBP32.55■■■□□ 2.8
RNF220-208ENST00000471494 RREB1Q92766 1687 aa32.55■■■□□ 2.8
RNF220-208ENST00000471494 TNS2Q63HR2 1409 aa32.54■■■□□ 2.8
RNF220-208ENST00000471494 FYB1O15117 783 aa32.54■■■□□ 2.8
RNF220-208ENST00000471494 GGNBP2Q9H3C7 697 aa32.54■■■□□ 2.8
RNF220-208ENST00000471494 MAP3K19Q56UN5 1328 aa32.53■■■□□ 2.8
RNF220-208ENST00000471494 EIF4G2P78344 907 aaKnown RBP eCLIP32.53■■■□□ 2.8
RNF220-208ENST00000471494 CAMKK2Q96RR4 588 aa32.53■■■□□ 2.8
RNF220-208ENST00000471494 EXOC5O00471 708 aa32.52■■■□□ 2.8
RNF220-208ENST00000471494 AMPHP49418 695 aa32.51■■■□□ 2.79
RNF220-208ENST00000471494 MARCH10Q8NA82 808 aaPredicted RBP32.51■■■□□ 2.79
RNF220-208ENST00000471494 NSD3Q9BZ95 1437 aa32.51■■■□□ 2.79
RNF220-208ENST00000471494 NUP188Q5SRE5 1749 aa32.49■■■□□ 2.79
RNF220-208ENST00000471494 LTV1Q96GA3 475 aaPredicted RBP32.49■■■□□ 2.79
RNF220-208ENST00000471494 RGPD3A6NKT7 1758 aaPredicted RBP32.49■■■□□ 2.79
RNF220-208ENST00000471494 RGPD4Q7Z3J3 1758 aa32.49■■■□□ 2.79
RNF220-208ENST00000471494 RTL1A6NKG5 1358 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 PSDA5PKW4 1024 aaPredicted RBP32.48■■■□□ 2.79
RNF220-208ENST00000471494 HSPA5P11021 654 aaKnown RBP32.48■■■□□ 2.79
RNF220-208ENST00000471494 IL2RBP14784 551 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 FBLN1P23142 703 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 HOXC9P31274 260 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 POLR3GLQ9BT43 218 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 BCL9O00512 1426 aa32.48■■■□□ 2.79
RNF220-208ENST00000471494 SRCAPQ6ZRS2 3230 aa32.47■■■□□ 2.79
RNF220-208ENST00000471494 RGPD2P0DJD1 1756 aa32.47■■■□□ 2.79
RNF220-208ENST00000471494 CARD14Q9BXL6 1004 aa32.46■■■□□ 2.79
RNF220-208ENST00000471494 RRS1Q15050 365 aaKnown RBP32.44■■■□□ 2.78
RNF220-208ENST00000471494 BCL11BQ9C0K0 894 aaPredicted RBP32.42■■■□□ 2.78
RNF220-208ENST00000471494 LRP5O75197 1615 aa32.4■■■□□ 2.78
RNF220-208ENST00000471494 KAT6BQ8WYB5 2073 aa32.4■■■□□ 2.78
RNF220-208ENST00000471494 R3HDM1Q15032 1099 aaKnown RBP32.4■■■□□ 2.78
RNF220-208ENST00000471494 NHSQ6T4R5 1651 aa32.4■■■□□ 2.78
RNF220-208ENST00000471494 SMG6Q86US8 1419 aaKnown RBP32.38■■■□□ 2.77
RNF220-208ENST00000471494 CGNL1Q0VF96 1302 aa32.37■■■□□ 2.77
RNF220-208ENST00000471494 ANKRD26Q9UPS8 1709 aa32.37■■■□□ 2.77
RNF220-208ENST00000471494 PTF1AQ7RTS3 328 aa32.36■■■□□ 2.77
RNF220-208ENST00000471494 FLT4P35916 1363 aa32.35■■■□□ 2.77
RNF220-208ENST00000471494 KIF24Q5T7B8 1368 aa32.35■■■□□ 2.77
RNF220-208ENST00000471494 PLSCR1O15162 318 aa32.35■■■□□ 2.77
RNF220-208ENST00000471494 NBPF14Q5TI25 921 aa32.34■■■□□ 2.77
RNF220-208ENST00000471494 MAP2P11137 1827 aaKnown RBP32.33■■■□□ 2.77
RNF220-208ENST00000471494 INSRP06213 1382 aa32.32■■■□□ 2.76
RNF220-208ENST00000471494 SHANK3Q9BYB0 1731 aa32.29■■■□□ 2.76
RNF220-208ENST00000471494 BTAF1O14981 1849 aa32.29■■■□□ 2.76
RNF220-208ENST00000471494 HSP90AB2PQ58FF8 381 aa32.29■■■□□ 2.76
RNF220-208ENST00000471494 MEGF6O75095 1541 aa32.28■■■□□ 2.76
RNF220-208ENST00000471494 ACSBG1Q96GR2 724 aa32.28■■■□□ 2.76
RNF220-208ENST00000471494 KCNQ2O43526 872 aa32.27■■■□□ 2.76
RNF220-208ENST00000471494 NBPF6Q5VWK0 638 aa32.26■■■□□ 2.75
RNF220-208ENST00000471494 DDX54Q8TDD1 881 aaKnown RBP32.26■■■□□ 2.75
RNF220-208ENST00000471494 NBPF4Q96M43 638 aa32.26■■■□□ 2.75
RNF220-208ENST00000471494 EMILIN1Q9Y6C2 1016 aa32.26■■■□□ 2.75
RNF220-208ENST00000471494 USHBP1Q8N6Y0 703 aa32.24■■■□□ 2.75
RNF220-208ENST00000471494 PANK3Q9H999 370 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms