RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
HOXB3-206ENST00000471459 COL5A2P05997 1499 aaPredicted RBP20.79■□□□□ 0.92
HOXB3-206ENST00000471459 AKAP12Q02952 1782 aa20.79■□□□□ 0.92
HOXB3-206ENST00000471459 WDR17Q8IZU2 1322 aa20.78■□□□□ 0.92
HOXB3-206ENST00000471459 BRWD3Q6RI45 1802 aa20.78■□□□□ 0.92
HOXB3-206ENST00000471459 PIK3C2AO00443 1686 aa20.78■□□□□ 0.92
HOXB3-206ENST00000471459 CDCA7Q9BWT1 371 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-206ENST00000471459 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
HOXB3-206ENST00000471459 COG3Q96JB2 828 aa20.77■□□□□ 0.92
HOXB3-206ENST00000471459 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
HOXB3-206ENST00000471459 CARD10Q9BWT7 1032 aa20.75■□□□□ 0.91
HOXB3-206ENST00000471459 DDB1Q16531 1140 aa20.74■□□□□ 0.91
HOXB3-206ENST00000471459 ANKRD36BQ8N2N9 1353 aa20.73■□□□□ 0.91
HOXB3-206ENST00000471459 TRIM37O94972 964 aa20.73■□□□□ 0.91
HOXB3-206ENST00000471459 EP400Q96L91 3159 aa20.73■□□□□ 0.91
HOXB3-206ENST00000471459 THSD7AQ9UPZ6 1657 aa20.73■□□□□ 0.91
HOXB3-206ENST00000471459 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
HOXB3-206ENST00000471459 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
HOXB3-206ENST00000471459 NLRP2Q9NX02 1062 aa20.71■□□□□ 0.91
HOXB3-206ENST00000471459 EXOC5O00471 708 aa20.7■□□□□ 0.9
HOXB3-206ENST00000471459 APBA3O96018 575 aa20.7■□□□□ 0.9
HOXB3-206ENST00000471459 EN1Q05925 392 aaPredicted RBP20.7■□□□□ 0.9
HOXB3-206ENST00000471459 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
HOXB3-206ENST00000471459 NFAT5O94916 1531 aa20.68■□□□□ 0.9
HOXB3-206ENST00000471459 AMPHP49418 695 aa20.68■□□□□ 0.9
HOXB3-206ENST00000471459 ANKRD24Q8TF21 1146 aa20.67■□□□□ 0.9
HOXB3-206ENST00000471459 IP6K1Q92551 441 aa20.67■□□□□ 0.9
HOXB3-206ENST00000471459 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
HOXB3-206ENST00000471459 FYB1O15117 783 aa20.66■□□□□ 0.9
HOXB3-206ENST00000471459 ERBB3P21860 1342 aa20.66■□□□□ 0.9
HOXB3-206ENST00000471459 ABCC6O95255 1503 aa20.66■□□□□ 0.9
HOXB3-206ENST00000471459 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
HOXB3-206ENST00000471459 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
HOXB3-206ENST00000471459 GGNBP2Q9H3C7 697 aa20.65■□□□□ 0.9
HOXB3-206ENST00000471459 COL18A1P39060 1754 aa20.64■□□□□ 0.9
HOXB3-206ENST00000471459 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
HOXB3-206ENST00000471459 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
HOXB3-206ENST00000471459 IL2RBP14784 551 aa20.62■□□□□ 0.89
HOXB3-206ENST00000471459 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
HOXB3-206ENST00000471459 DISP2A7MBM2 1401 aa20.61■□□□□ 0.89
HOXB3-206ENST00000471459 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
HOXB3-206ENST00000471459 MAP3K19Q56UN5 1328 aa20.61■□□□□ 0.89
HOXB3-206ENST00000471459 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
HOXB3-206ENST00000471459 CAMKK2Q96RR4 588 aa20.61■□□□□ 0.89
HOXB3-206ENST00000471459 RGPD1P0DJD0 1748 aa20.61■□□□□ 0.89
HOXB3-206ENST00000471459 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
HOXB3-206ENST00000471459 MARCH10Q8NA82 808 aaPredicted RBP20.6■□□□□ 0.89
HOXB3-206ENST00000471459 USP54Q70EL1 1684 aa20.6■□□□□ 0.89
HOXB3-206ENST00000471459 HOXC9P31274 260 aa20.59■□□□□ 0.89
HOXB3-206ENST00000471459 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
HOXB3-206ENST00000471459 CARD14Q9BXL6 1004 aa20.58■□□□□ 0.89
HOXB3-206ENST00000471459 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
HOXB3-206ENST00000471459 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
HOXB3-206ENST00000471459 FBLN1P23142 703 aa20.57■□□□□ 0.88
HOXB3-206ENST00000471459 PSDA5PKW4 1024 aaPredicted RBP20.56■□□□□ 0.88
HOXB3-206ENST00000471459 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
HOXB3-206ENST00000471459 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
HOXB3-206ENST00000471459 RGPD5Q99666 1765 aa20.54■□□□□ 0.88
HOXB3-206ENST00000471459 PLSCR1O15162 318 aa20.54■□□□□ 0.88
HOXB3-206ENST00000471459 R3HDM1Q15032 1099 aaKnown RBP20.54■□□□□ 0.88
HOXB3-206ENST00000471459 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
HOXB3-206ENST00000471459 BCL9O00512 1426 aa20.53■□□□□ 0.88
HOXB3-206ENST00000471459 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
HOXB3-206ENST00000471459 LTN1O94822 1766 aa20.52■□□□□ 0.88
HOXB3-206ENST00000471459 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-206ENST00000471459 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
HOXB3-206ENST00000471459 LRRC37A3O60309 1634 aa20.5■□□□□ 0.87
HOXB3-206ENST00000471459 KIF24Q5T7B8 1368 aa20.5■□□□□ 0.87
HOXB3-206ENST00000471459 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
HOXB3-206ENST00000471459 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
HOXB3-206ENST00000471459 PANK3Q9H999 370 aa20.49■□□□□ 0.87
HOXB3-206ENST00000471459 FLT4P35916 1363 aa20.48■□□□□ 0.87
HOXB3-206ENST00000471459 TNS1Q9HBL0 1735 aaKnown RBP20.48■□□□□ 0.87
HOXB3-206ENST00000471459 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
HOXB3-206ENST00000471459 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
HOXB3-206ENST00000471459 INSRP06213 1382 aa20.47■□□□□ 0.87
HOXB3-206ENST00000471459 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
HOXB3-206ENST00000471459 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
HOXB3-206ENST00000471459 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
HOXB3-206ENST00000471459 TATP17735 454 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-206ENST00000471459 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
HOXB3-206ENST00000471459 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
HOXB3-206ENST00000471459 KCNQ2O43526 872 aa20.44■□□□□ 0.86
HOXB3-206ENST00000471459 EMILIN1Q9Y6C2 1016 aa20.44■□□□□ 0.86
HOXB3-206ENST00000471459 PEAK1Q9H792 1746 aa20.44■□□□□ 0.86
HOXB3-206ENST00000471459 TNNT2P45379 298 aaPredicted RBP20.43■□□□□ 0.86
HOXB3-206ENST00000471459 WNK3Q9BYP7 1800 aa20.42■□□□□ 0.86
HOXB3-206ENST00000471459 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
HOXB3-206ENST00000471459 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
HOXB3-206ENST00000471459 SYTL4Q96C24 671 aaPredicted RBP20.41■□□□□ 0.86
HOXB3-206ENST00000471459 WASHC2AQ641Q2 1341 aa20.41■□□□□ 0.86
HOXB3-206ENST00000471459 MYOM1P52179 1685 aa20.41■□□□□ 0.86
HOXB3-206ENST00000471459 FAM208AQ9UK61 1670 aaKnown RBP20.41■□□□□ 0.86
HOXB3-206ENST00000471459 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
HOXB3-206ENST00000471459 KIF20BQ96Q89 1820 aa20.4■□□□□ 0.86
HOXB3-206ENST00000471459 POLKQ9UBT6 870 aa20.4■□□□□ 0.86
HOXB3-206ENST00000471459 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
HOXB3-206ENST00000471459 NSD2O96028 1365 aa20.38■□□□□ 0.85
HOXB3-206ENST00000471459 PROM2Q8N271 834 aa20.38■□□□□ 0.85
HOXB3-206ENST00000471459 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 237.7 ms